RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 COX19Q49B96 90 aa7.44□□□□□ -1.22
LIG1-217ENST00000599165 Q8IZM0 81 aa7.44□□□□□ -1.22
LIG1-217ENST00000599165 YPEL4Q96NS1 127 aa7.44□□□□□ -1.22
LIG1-217ENST00000599165 SMIM1B2RUZ4 78 aa7.43□□□□□ -1.22
LIG1-217ENST00000599165 NDUFC2-KCTD14E9PQ53 114 aa7.43□□□□□ -1.22
LIG1-217ENST00000599165 KRTAP10-8P60410 259 aa7.43□□□□□ -1.22
LIG1-217ENST00000599165 FAM19A5Q7Z5A7 132 aaPredicted RBP7.43□□□□□ -1.22
LIG1-217ENST00000599165 CST9LQ9H4G1 147 aa7.43□□□□□ -1.22
LIG1-217ENST00000599165 TOMM7Q9P0U1 55 aa7.43□□□□□ -1.22
LIG1-217ENST00000599165 APOC3P02656 99 aa7.42□□□□□ -1.22
LIG1-217ENST00000599165 G0S2P27469 103 aa7.42□□□□□ -1.22
LIG1-217ENST00000599165 PAPPA-AS1Q5QFB9 102 aa7.42□□□□□ -1.22
LIG1-217ENST00000599165 C18orf32Q8TCD1 76 aa7.42□□□□□ -1.22
LIG1-217ENST00000599165 TINCRA0A1B0GVN0 87 aa7.41□□□□□ -1.22
LIG1-217ENST00000599165 SEC11AP67812 179 aa7.41□□□□□ -1.22
LIG1-217ENST00000599165 GEMIN7Q9H840 131 aaKnown RBP7.41□□□□□ -1.22
LIG1-217ENST00000599165 C1orf137Q5JT78 98 aa7.4□□□□□ -1.22
LIG1-217ENST00000599165 FA2HQ7L5A8 372 aa7.4□□□□□ -1.22
LIG1-217ENST00000599165 LINC00469Q8N7U9 141 aa7.4□□□□□ -1.22
LIG1-217ENST00000599165 PACRGQ96M98 296 aaPredicted RBP7.4□□□□□ -1.22
LIG1-217ENST00000599165 PLA2G2DQ9UNK4 145 aa7.4□□□□□ -1.22
LIG1-217ENST00000599165 TRAPPC1Q9Y5R8 145 aa7.4□□□□□ -1.22
LIG1-217ENST00000599165 M0QXV9 152 aa7.39□□□□□ -1.23
LIG1-217ENST00000599165 IGLV7-43P04211 117 aa7.39□□□□□ -1.23
LIG1-217ENST00000599165 PRSS2P07478 247 aa7.39□□□□□ -1.23
LIG1-217ENST00000599165 CKS1BP61024 79 aa7.39□□□□□ -1.23
LIG1-217ENST00000599165 PMVKQ15126 192 aa7.39□□□□□ -1.23
LIG1-217ENST00000599165 C6orf226Q5I0X4 101 aa7.39□□□□□ -1.23
LIG1-217ENST00000599165 LRP2P98164 4655 aa7.39□□□□□ -1.23
LIG1-217ENST00000599165 LINC01549A6NIU2 74 aa7.38□□□□□ -1.23
LIG1-217ENST00000599165 F8VRH5 84 aa7.38□□□□□ -1.23
LIG1-217ENST00000599165 SPINK8P0C7L1 97 aa7.38□□□□□ -1.23
LIG1-217ENST00000599165 PMCHL1Q16048 86 aa7.38□□□□□ -1.23
LIG1-217ENST00000599165 PDZD11Q5EBL8 140 aa7.38□□□□□ -1.23
LIG1-217ENST00000599165 XAGE1AQ9HD64 81 aa7.38□□□□□ -1.23
LIG1-217ENST00000599165 SMCO4Q9NRQ5 59 aa7.38□□□□□ -1.23
LIG1-217ENST00000599165 SNAPINO95295 136 aa7.37□□□□□ -1.23
LIG1-217ENST00000599165 LINC00614P0C842 121 aa7.37□□□□□ -1.23
LIG1-217ENST00000599165 IGLC3P0DOY3 106 aa7.37□□□□□ -1.23
LIG1-217ENST00000599165 REG3GQ6UW15 175 aa7.37□□□□□ -1.23
LIG1-217ENST00000599165 SVBPQ8N300 66 aa7.37□□□□□ -1.23
LIG1-217ENST00000599165 COX7B2Q8TF08 81 aa7.37□□□□□ -1.23
LIG1-217ENST00000599165 IGLV5-39A0A0G2JS06 123 aa7.35□□□□□ -1.23
LIG1-217ENST00000599165 HBDP02042 147 aa7.35□□□□□ -1.23
LIG1-217ENST00000599165 ZNF22P17026 224 aaPredicted RBP7.35□□□□□ -1.23
LIG1-217ENST00000599165 CXCL5P42830 114 aa7.35□□□□□ -1.23
LIG1-217ENST00000599165 KRTAP1-4P0C5Y4 121 aa7.34□□□□□ -1.23
LIG1-217ENST00000599165 C22orf24Q9Y442 160 aa7.34□□□□□ -1.23
LIG1-217ENST00000599165 H0Y9J4 135 aa7.33□□□□□ -1.24
LIG1-217ENST00000599165 NDUFA5Q16718 116 aa7.33□□□□□ -1.24
LIG1-217ENST00000599165 CBLN2Q8IUK8 224 aa7.33□□□□□ -1.24
LIG1-217ENST00000599165 C11orf86A6NJI1 115 aa7.32□□□□□ -1.24
LIG1-217ENST00000599165 UBE2BP63146 152 aa7.32□□□□□ -1.24
LIG1-217ENST00000599165 NDUFA6P56556 154 aa7.31□□□□□ -1.24
LIG1-217ENST00000599165 PRR26Q8N8Z3 221 aa7.31□□□□□ -1.24
LIG1-217ENST00000599165 DIRC1Q969H9 104 aa7.31□□□□□ -1.24
LIG1-217ENST00000599165 H3BRM9 83 aa7.3□□□□□ -1.24
LIG1-217ENST00000599165 TP73-AS1Q9UF72 201 aa7.3□□□□□ -1.24
LIG1-217ENST00000599165 IGLV5-37A0A075B6J1 123 aa7.29□□□□□ -1.24
LIG1-217ENST00000599165 ATP5LO75964 103 aa7.29□□□□□ -1.24
LIG1-217ENST00000599165 LINC00310P59036 64 aa7.29□□□□□ -1.24
LIG1-217ENST00000599165 RAB5BP61020 215 aa7.29□□□□□ -1.24
LIG1-217ENST00000599165 MRPL55Q7Z7F7 128 aaKnown RBP7.29□□□□□ -1.24
LIG1-217ENST00000599165 BAGE3Q86Y29 109 aa7.29□□□□□ -1.24
LIG1-217ENST00000599165 Q8NDZ9 215 aa7.29□□□□□ -1.24
LIG1-217ENST00000599165 SLC7A5P1Q8MH63 180 aa7.28□□□□□ -1.24
LIG1-217ENST00000599165 CHCHD1Q96BP2 118 aaKnown RBP7.28□□□□□ -1.24
LIG1-217ENST00000599165 LINC00167Q96N53 147 aa7.28□□□□□ -1.24
LIG1-217ENST00000599165 LPAP08519 4548 aa7.27□□□□□ -1.25
LIG1-217ENST00000599165 ZNF861PO60384 105 aa7.27□□□□□ -1.25
LIG1-217ENST00000599165 SCO1O75880 301 aa7.27□□□□□ -1.25
LIG1-217ENST00000599165 ZNF625Q96I27 306 aaPredicted RBP7.27□□□□□ -1.25
LIG1-217ENST00000599165 RPL37AP8A6NKH3 93 aa7.26□□□□□ -1.25
LIG1-217ENST00000599165 NUPR1O60356 82 aa7.26□□□□□ -1.25
LIG1-217ENST00000599165 LBHQ53QV2 105 aaPredicted RBP7.26□□□□□ -1.25
LIG1-217ENST00000599165 FAM19A2Q8N3H0 131 aa7.26□□□□□ -1.25
LIG1-217ENST00000599165 CHTOPQ9Y3Y2 248 aaKnown RBP7.26□□□□□ -1.25
LIG1-217ENST00000599165 TRAV12-1A0A0B4J245 112 aa7.25□□□□□ -1.25
LIG1-217ENST00000599165 TMEM223A0PJW6 202 aa7.25□□□□□ -1.25
LIG1-217ENST00000599165 GAGE10A6NGK3 116 aa7.25□□□□□ -1.25
LIG1-217ENST00000599165 TRGC2P03986 189 aa7.25□□□□□ -1.25
LIG1-217ENST00000599165 VPREB1P12018 145 aa7.25□□□□□ -1.25
LIG1-217ENST00000599165 PFN2P35080 140 aa7.25□□□□□ -1.25
LIG1-217ENST00000599165 TMEM170BQ5T4T1 132 aa7.25□□□□□ -1.25
LIG1-217ENST00000599165 KRTAP13-1Q8IUC0 172 aa7.25□□□□□ -1.25
LIG1-217ENST00000599165 IFI27L1Q96BM0 104 aa7.25□□□□□ -1.25
LIG1-217ENST00000599165 SND1-IT1Q9HBX3 110 aa7.25□□□□□ -1.25
LIG1-217ENST00000599165 ERG28Q9UKR5 140 aa7.25□□□□□ -1.25
LIG1-217ENST00000599165 BCE1O60756 84 aa7.24□□□□□ -1.25
LIG1-217ENST00000599165 IGLV1-50A0A075B6I6 118 aa7.23□□□□□ -1.25
LIG1-217ENST00000599165 RNF213Q63HN8 5207 aa7.23□□□□□ -1.25
LIG1-217ENST00000599165 COLCA2A8K830 154 aa7.22□□□□□ -1.25
LIG1-217ENST00000599165 SERF1AO75920 110 aa7.22□□□□□ -1.25
LIG1-217ENST00000599165 HSBP1O75506 76 aa7.21□□□□□ -1.26
LIG1-217ENST00000599165 COX17Q14061 63 aa7.21□□□□□ -1.26
LIG1-217ENST00000599165 A0A087X002 238 aa7.2□□□□□ -1.26
LIG1-217ENST00000599165 NKAPP1Q8N9T2 125 aa7.2□□□□□ -1.26
LIG1-217ENST00000599165 IGKV2-28A0A075B6P5 120 aa7.19□□□□□ -1.26
LIG1-217ENST00000599165 IGKV2D-28P01615 120 aa7.19□□□□□ -1.26
LIG1-217ENST00000599165 RPL28P46779 137 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms