RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 COMMD7Q86VX2 200 aa14.1□□□□□ -0.15
SSBP4-205ENST00000598159 ALKBH7Q9BT30 221 aaPredicted RBP14.1□□□□□ -0.15
SSBP4-205ENST00000598159 CDKN2A-AS1Q9UH64 79 aa14.1□□□□□ -0.15
SSBP4-205ENST00000598159 TNXBP22105 4242 aa14.09□□□□□ -0.15
SSBP4-205ENST00000598159 IGLV7-43P04211 117 aa14.08□□□□□ -0.16
SSBP4-205ENST00000598159 C10orf91Q5T1B1 145 aa14.08□□□□□ -0.16
SSBP4-205ENST00000598159 KRTAP7-1Q8IUC3 87 aa14.07□□□□□ -0.16
SSBP4-205ENST00000598159 C9orf129Q5T035 196 aaKnown RBP14.06□□□□□ -0.16
SSBP4-205ENST00000598159 M0QXV9 152 aa14.05□□□□□ -0.16
SSBP4-205ENST00000598159 FABP9Q0Z7S8 132 aa14.05□□□□□ -0.16
SSBP4-205ENST00000598159 RHEBQ15382 184 aa14.05□□□□□ -0.16
SSBP4-205ENST00000598159 TINCRA0A1B0GVN0 87 aa14.04□□□□□ -0.16
SSBP4-205ENST00000598159 KRTAP11-1Q8IUC1 163 aa14.04□□□□□ -0.16
SSBP4-205ENST00000598159 DIRC1Q969H9 104 aa14.04□□□□□ -0.16
SSBP4-205ENST00000598159 MRPL18Q9H0U6 180 aaKnown RBP14.04□□□□□ -0.16
SSBP4-205ENST00000598159 RPS10P5Q9NQ39 176 aa14.04□□□□□ -0.16
SSBP4-205ENST00000598159 F8VRH5 84 aa14.03□□□□□ -0.16
SSBP4-205ENST00000598159 CXCL5P42830 114 aa14.03□□□□□ -0.16
SSBP4-205ENST00000598159 UBE2BP63146 152 aa14.03□□□□□ -0.16
SSBP4-205ENST00000598159 FA2HQ7L5A8 372 aa14.03□□□□□ -0.16
SSBP4-205ENST00000598159 CARHSP1Q9Y2V2 147 aaKnown RBP14.03□□□□□ -0.16
SSBP4-205ENST00000598159 LINC00469Q8N7U9 141 aa14.02□□□□□ -0.17
SSBP4-205ENST00000598159 CST9LQ9H4G1 147 aa14.02□□□□□ -0.17
SSBP4-205ENST00000598159 PDZD11Q5EBL8 140 aa14.01□□□□□ -0.17
SSBP4-205ENST00000598159 SMCO4Q9NRQ5 59 aa14.01□□□□□ -0.17
SSBP4-205ENST00000598159 UBR4Q5T4S7 5183 aa14.01□□□□□ -0.17
SSBP4-205ENST00000598159 IGLV5-45A0A087WSX0 123 aa13.99□□□□□ -0.17
SSBP4-205ENST00000598159 SMIM1B2RUZ4 78 aa13.99□□□□□ -0.17
SSBP4-205ENST00000598159 PMVKQ15126 192 aa13.99□□□□□ -0.17
SSBP4-205ENST00000598159 ODF1Q14990 250 aa13.98□□□□□ -0.17
SSBP4-205ENST00000598159 H0Y9J4 135 aa13.97□□□□□ -0.17
SSBP4-205ENST00000598159 COX7B2Q8TF08 81 aa13.97□□□□□ -0.17
SSBP4-205ENST00000598159 XAGE1AQ9HD64 81 aa13.96□□□□□ -0.17
SSBP4-205ENST00000598159 C22orf24Q9Y442 160 aa13.96□□□□□ -0.17
SSBP4-205ENST00000598159 LBHQ53QV2 105 aaPredicted RBP13.95□□□□□ -0.18
SSBP4-205ENST00000598159 TRAPPC1Q9Y5R8 145 aa13.95□□□□□ -0.18
SSBP4-205ENST00000598159 LINC00614P0C842 121 aa13.93□□□□□ -0.18
SSBP4-205ENST00000598159 H3BRM9 83 aa13.92□□□□□ -0.18
SSBP4-205ENST00000598159 TP73-AS1Q9UF72 201 aa13.92□□□□□ -0.18
SSBP4-205ENST00000598159 NUPR1O60356 82 aa13.91□□□□□ -0.18
SSBP4-205ENST00000598159 SPINK8P0C7L1 97 aa13.91□□□□□ -0.18
SSBP4-205ENST00000598159 PRR26Q8N8Z3 221 aa13.9□□□□□ -0.18
SSBP4-205ENST00000598159 C18orf32Q8TCD1 76 aa13.9□□□□□ -0.18
SSBP4-205ENST00000598159 APOC3P02656 99 aa13.89□□□□□ -0.19
SSBP4-205ENST00000598159 A0A096LNJ9 63 aa13.88□□□□□ -0.19
SSBP4-205ENST00000598159 SNAPINO95295 136 aa13.88□□□□□ -0.19
SSBP4-205ENST00000598159 IGLC3P0DOY3 106 aa13.88□□□□□ -0.19
SSBP4-205ENST00000598159 MRPL55Q7Z7F7 128 aaKnown RBP13.88□□□□□ -0.19
SSBP4-205ENST00000598159 URB1-AS1Q96HZ7 61 aa13.88□□□□□ -0.19
SSBP4-205ENST00000598159 IGLV1-50A0A075B6I6 118 aa13.87□□□□□ -0.19
SSBP4-205ENST00000598159 ZNF861PO60384 105 aa13.87□□□□□ -0.19
SSBP4-205ENST00000598159 NDUFA6P56556 154 aa13.87□□□□□ -0.19
SSBP4-205ENST00000598159 RAB5BP61020 215 aa13.87□□□□□ -0.19
SSBP4-205ENST00000598159 NDUFA5Q16718 116 aa13.87□□□□□ -0.19
SSBP4-205ENST00000598159 HBDP02042 147 aa13.86□□□□□ -0.19
SSBP4-205ENST00000598159 SVBPQ8N300 66 aa13.86□□□□□ -0.19
SSBP4-205ENST00000598159 KRTAP1-4P0C5Y4 121 aa13.85□□□□□ -0.19
SSBP4-205ENST00000598159 ATP5LO75964 103 aa13.84□□□□□ -0.19
SSBP4-205ENST00000598159 IGLV5-39A0A0G2JS06 123 aa13.82□□□□□ -0.2
SSBP4-205ENST00000598159 LINC00167Q96N53 147 aa13.82□□□□□ -0.2
SSBP4-205ENST00000598159 ZNF22P17026 224 aaPredicted RBP13.81□□□□□ -0.2
SSBP4-205ENST00000598159 PMCHL1Q16048 86 aa13.81□□□□□ -0.2
SSBP4-205ENST00000598159 IGLV5-37A0A075B6J1 123 aa13.8□□□□□ -0.2
SSBP4-205ENST00000598159 RPL13AP40429 203 aaKnown RBP13.8□□□□□ -0.2
SSBP4-205ENST00000598159 BCE1O60756 84 aa13.79□□□□□ -0.2
SSBP4-205ENST00000598159 BAGE3Q86Y29 109 aa13.79□□□□□ -0.2
SSBP4-205ENST00000598159 LRP2P98164 4655 aa13.78□□□□□ -0.2
SSBP4-205ENST00000598159 RPL37AP8A6NKH3 93 aa13.78□□□□□ -0.2
SSBP4-205ENST00000598159 RPL28P46779 137 aaKnown RBP13.78□□□□□ -0.2
SSBP4-205ENST00000598159 NKAPP1Q8N9T2 125 aa13.77□□□□□ -0.21
SSBP4-205ENST00000598159 PFN2P35080 140 aa13.76□□□□□ -0.21
SSBP4-205ENST00000598159 COX17Q14061 63 aa13.76□□□□□ -0.21
SSBP4-205ENST00000598159 GAGE10A6NGK3 116 aa13.74□□□□□ -0.21
SSBP4-205ENST00000598159 C11orf86A6NJI1 115 aa13.74□□□□□ -0.21
SSBP4-205ENST00000598159 TMEM170BQ5T4T1 132 aa13.74□□□□□ -0.21
SSBP4-205ENST00000598159 SFTA2Q6UW10 78 aa13.74□□□□□ -0.21
SSBP4-205ENST00000598159 ERG28Q9UKR5 140 aa13.74□□□□□ -0.21
SSBP4-205ENST00000598159 CHCHD1Q96BP2 118 aaKnown RBP13.73□□□□□ -0.21
SSBP4-205ENST00000598159 YPEL4Q96NS1 127 aa13.73□□□□□ -0.21
SSBP4-205ENST00000598159 CHTOPQ9Y3Y2 248 aaKnown RBP13.72□□□□□ -0.21
SSBP4-205ENST00000598159 SND1-IT1Q9HBX3 110 aa13.71□□□□□ -0.21
SSBP4-205ENST00000598159 TRAV12-1A0A0B4J245 112 aa13.69□□□□□ -0.22
SSBP4-205ENST00000598159 RPL24P83731 157 aaKnown RBP13.69□□□□□ -0.22
SSBP4-205ENST00000598159 IFI27L1Q96BM0 104 aa13.69□□□□□ -0.22
SSBP4-205ENST00000598159 ZNF625Q96I27 306 aaPredicted RBP13.69□□□□□ -0.22
SSBP4-205ENST00000598159 VPREB1P12018 145 aa13.67□□□□□ -0.22
SSBP4-205ENST00000598159 UBE2AP49459 152 aa13.67□□□□□ -0.22
SSBP4-205ENST00000598159 IGKV2-28A0A075B6P5 120 aa13.65□□□□□ -0.22
SSBP4-205ENST00000598159 SCO1O75880 301 aa13.65□□□□□ -0.22
SSBP4-205ENST00000598159 IGKV2D-28P01615 120 aa13.65□□□□□ -0.22
SSBP4-205ENST00000598159 KRTAP13-1Q8IUC0 172 aa13.65□□□□□ -0.22
SSBP4-205ENST00000598159 TMEM223A0PJW6 202 aa13.64□□□□□ -0.23
SSBP4-205ENST00000598159 CRYGAP11844 174 aa13.64□□□□□ -0.23
SSBP4-205ENST00000598159 LINC00158P58513 81 aa13.62□□□□□ -0.23
SSBP4-205ENST00000598159 RNF213Q63HN8 5207 aa13.62□□□□□ -0.23
SSBP4-205ENST00000598159 A0A087X002 238 aa13.61□□□□□ -0.23
SSBP4-205ENST00000598159 HSBP1O75506 76 aa13.61□□□□□ -0.23
SSBP4-205ENST00000598159 CBLN2Q8IUK8 224 aa13.6□□□□□ -0.23
SSBP4-205ENST00000598159 TYMSOSQ8TAI1 123 aa13.59□□□□□ -0.23
SSBP4-205ENST00000598159 TMEM126AQ9H061 195 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms