RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 IGIPA6NJ69 53 aa13.48□□□□□ -0.25
SSBP4-203ENST00000593641 FAM19A3Q7Z5A8 133 aa13.48□□□□□ -0.25
SSBP4-203ENST00000593641 CTDSP1Q9GZU7 261 aa13.48□□□□□ -0.25
SSBP4-203ENST00000593641 F8VRH5 84 aa13.47□□□□□ -0.25
SSBP4-203ENST00000593641 PNRC1Q12796 327 aaPredicted RBP13.47□□□□□ -0.25
SSBP4-203ENST00000593641 GEMIN7Q9H840 131 aaKnown RBP13.47□□□□□ -0.25
SSBP4-203ENST00000593641 MT-ND4LP03901 98 aa13.46□□□□□ -0.25
SSBP4-203ENST00000593641 MRPL55Q7Z7F7 128 aaKnown RBP13.46□□□□□ -0.25
SSBP4-203ENST00000593641 ANAPC16Q96DE5 110 aa13.46□□□□□ -0.25
SSBP4-203ENST00000593641 NXT2Q9NPJ8 142 aaKnown RBP13.46□□□□□ -0.25
SSBP4-203ENST00000593641 TP73-AS1Q9UF72 201 aa13.46□□□□□ -0.25
SSBP4-203ENST00000593641 CDKN2A-AS1Q9UH64 79 aa13.46□□□□□ -0.25
SSBP4-203ENST00000593641 A0A1B0GVG6 124 aa13.45□□□□□ -0.26
SSBP4-203ENST00000593641 G0S2P27469 103 aa13.45□□□□□ -0.26
SSBP4-203ENST00000593641 CXCL5P42830 114 aa13.45□□□□□ -0.26
SSBP4-203ENST00000593641 RPL28P46779 137 aaKnown RBP13.45□□□□□ -0.26
SSBP4-203ENST00000593641 TSPAN13O95857 204 aa13.43□□□□□ -0.26
SSBP4-203ENST00000593641 BCE1O60756 84 aa13.42□□□□□ -0.26
SSBP4-203ENST00000593641 TIMM17AQ99595 171 aa13.42□□□□□ -0.26
SSBP4-203ENST00000593641 A0A0U1RQV1 116 aa13.41□□□□□ -0.26
SSBP4-203ENST00000593641 CRYGAP11844 174 aa13.39□□□□□ -0.27
SSBP4-203ENST00000593641 TOMM6Q96B49 74 aa13.39□□□□□ -0.27
SSBP4-203ENST00000593641 A0A087X002 238 aa13.38□□□□□ -0.27
SSBP4-203ENST00000593641 TYMSOSQ8TAI1 123 aa13.38□□□□□ -0.27
SSBP4-203ENST00000593641 RPL37AP8A6NKH3 93 aa13.36□□□□□ -0.27
SSBP4-203ENST00000593641 SMIM1B2RUZ4 78 aa13.36□□□□□ -0.27
SSBP4-203ENST00000593641 ERASQ7Z444 233 aa13.36□□□□□ -0.27
SSBP4-203ENST00000593641 LINC00167Q96N53 147 aa13.36□□□□□ -0.27
SSBP4-203ENST00000593641 PDZD11Q5EBL8 140 aa13.35□□□□□ -0.27
SSBP4-203ENST00000593641 COX7B2Q8TF08 81 aa13.35□□□□□ -0.27
SSBP4-203ENST00000593641 SCGB3A1Q96QR1 104 aa13.35□□□□□ -0.27
SSBP4-203ENST00000593641 TINCRA0A1B0GVN0 87 aa13.33□□□□□ -0.28
SSBP4-203ENST00000593641 GAGE10A6NGK3 116 aa13.33□□□□□ -0.28
SSBP4-203ENST00000593641 NKAPP1Q8N9T2 125 aa13.32□□□□□ -0.28
SSBP4-203ENST00000593641 UBE2AP49459 152 aa13.31□□□□□ -0.28
SSBP4-203ENST00000593641 RAB14P61106 215 aa13.31□□□□□ -0.28
SSBP4-203ENST00000593641 KIAA1644Q3SXP7 199 aa13.31□□□□□ -0.28
SSBP4-203ENST00000593641 IGLV5-45A0A087WSX0 123 aa13.3□□□□□ -0.28
SSBP4-203ENST00000593641 RAB5BP61020 215 aa13.3□□□□□ -0.28
SSBP4-203ENST00000593641 LINC01549A6NIU2 74 aa13.29□□□□□ -0.28
SSBP4-203ENST00000593641 ADCYAP1P18509 176 aa13.29□□□□□ -0.28
SSBP4-203ENST00000593641 IGLV5-37A0A075B6J1 123 aa13.28□□□□□ -0.28
SSBP4-203ENST00000593641 ANAPC11Q9NYG5 84 aa13.28□□□□□ -0.28
SSBP4-203ENST00000593641 SPINK8P0C7L1 97 aa13.27□□□□□ -0.29
SSBP4-203ENST00000593641 ATP5LO75964 103 aa13.25□□□□□ -0.29
SSBP4-203ENST00000593641 KRTAP13-1Q8IUC0 172 aa13.25□□□□□ -0.29
SSBP4-203ENST00000593641 CST9LQ9H4G1 147 aa13.25□□□□□ -0.29
SSBP4-203ENST00000593641 IGKV2-28A0A075B6P5 120 aa13.24□□□□□ -0.29
SSBP4-203ENST00000593641 H3BRM9 83 aa13.24□□□□□ -0.29
SSBP4-203ENST00000593641 IGKV2D-28P01615 120 aa13.24□□□□□ -0.29
SSBP4-203ENST00000593641 FAM229BQ4G0N7 80 aa13.24□□□□□ -0.29
SSBP4-203ENST00000593641 KRTAP13-2Q52LG2 175 aa13.24□□□□□ -0.29
SSBP4-203ENST00000593641 MRPL18Q9H0U6 180 aaKnown RBP13.24□□□□□ -0.29
SSBP4-203ENST00000593641 TRAV9-1A0A075B6T8 112 aa13.23□□□□□ -0.29
SSBP4-203ENST00000593641 PMVKQ15126 192 aa13.23□□□□□ -0.29
SSBP4-203ENST00000593641 LINC00304Q8N9R0 145 aa13.22□□□□□ -0.29
SSBP4-203ENST00000593641 LINC01546A6NGU7 62 aa13.21□□□□□ -0.29
SSBP4-203ENST00000593641 RETNLBQ9BQ08 111 aa13.21□□□□□ -0.29
SSBP4-203ENST00000593641 FAT4Q6V0I7 4981 aa13.21□□□□□ -0.29
SSBP4-203ENST00000593641 SMCO4Q9NRQ5 59 aa13.2□□□□□ -0.3
SSBP4-203ENST00000593641 IGKV2D-26A0A0A0MRZ7 120 aa13.19□□□□□ -0.3
SSBP4-203ENST00000593641 SCO1O75880 301 aa13.19□□□□□ -0.3
SSBP4-203ENST00000593641 PFN2P35080 140 aa13.19□□□□□ -0.3
SSBP4-203ENST00000593641 FA2HQ7L5A8 372 aa13.19□□□□□ -0.3
SSBP4-203ENST00000593641 GNB1LQ9BYB4 327 aa13.18□□□□□ -0.3
SSBP4-203ENST00000593641 S100PP25815 95 aa13.17□□□□□ -0.3
SSBP4-203ENST00000593641 PRLHP81277 87 aa13.17□□□□□ -0.3
SSBP4-203ENST00000593641 FAM19A1Q7Z5A9 133 aa13.17□□□□□ -0.3
SSBP4-203ENST00000593641 TMEM126AQ9H061 195 aa13.15□□□□□ -0.3
SSBP4-203ENST00000593641 CDIP1Q9H305 208 aa13.15□□□□□ -0.3
SSBP4-203ENST00000593641 IGLC3P0DOY3 106 aa13.14□□□□□ -0.31
SSBP4-203ENST00000593641 VPREB1P12018 145 aa13.14□□□□□ -0.31
SSBP4-203ENST00000593641 RPL24P83731 157 aaKnown RBP13.14□□□□□ -0.31
SSBP4-203ENST00000593641 SND1-IT1Q9HBX3 110 aa13.14□□□□□ -0.31
SSBP4-203ENST00000593641 ERG28Q9UKR5 140 aa13.14□□□□□ -0.31
SSBP4-203ENST00000593641 IGLV5-39A0A0G2JS06 123 aa13.13□□□□□ -0.31
SSBP4-203ENST00000593641 NDUFA6P56556 154 aa13.13□□□□□ -0.31
SSBP4-203ENST00000593641 COX19Q49B96 90 aa13.13□□□□□ -0.31
SSBP4-203ENST00000593641 CLLU1Q5K131 121 aa13.13□□□□□ -0.31
SSBP4-203ENST00000593641 MUC17Q685J3 4493 aa13.13□□□□□ -0.31
SSBP4-203ENST00000593641 TMEM238C9JI98 176 aa13.12□□□□□ -0.31
SSBP4-203ENST00000593641 TPRXLQ17RH7 258 aa13.12□□□□□ -0.31
SSBP4-203ENST00000593641 CTAG1AP78358 180 aa13.11□□□□□ -0.31
SSBP4-203ENST00000593641 COX17Q14061 63 aa13.11□□□□□ -0.31
SSBP4-203ENST00000593641 UQCC3Q6UW78 93 aa13.11□□□□□ -0.31
SSBP4-203ENST00000593641 KRTAP9-2Q9BYQ4 174 aa13.11□□□□□ -0.31
SSBP4-203ENST00000593641 IGLV7-46A0A075B6I9 117 aa13.1□□□□□ -0.31
SSBP4-203ENST00000593641 TMEM218A2RU14 115 aa13.1□□□□□ -0.31
SSBP4-203ENST00000593641 ZNF22P17026 224 aaPredicted RBP13.1□□□□□ -0.31
SSBP4-203ENST00000593641 FABP9Q0Z7S8 132 aa13.1□□□□□ -0.31
SSBP4-203ENST00000593641 M0R378 163 aa13.08□□□□□ -0.32
SSBP4-203ENST00000593641 LCE2AQ5TA79 106 aaPredicted RBP13.08□□□□□ -0.32
SSBP4-203ENST00000593641 CBLN2Q8IUK8 224 aa13.08□□□□□ -0.32
SSBP4-203ENST00000593641 ZNF625Q96I27 306 aaPredicted RBP13.08□□□□□ -0.32
SSBP4-203ENST00000593641 SFTA2Q6UW10 78 aa13.07□□□□□ -0.32
SSBP4-203ENST00000593641 PLEKHB2Q96CS7 222 aa13.07□□□□□ -0.32
SSBP4-203ENST00000593641 HIGD2AQ9BW72 106 aa13.05□□□□□ -0.32
SSBP4-203ENST00000593641 SEC11CQ9BY50 192 aa13.05□□□□□ -0.32
SSBP4-203ENST00000593641 A0A096LNJ9 63 aa13.03□□□□□ -0.32
SSBP4-203ENST00000593641 HBDP02042 147 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms