RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 XCL1P47992 114 aa7.92□□□□□ -1.14
DDX39A-219ENST00000592927 TM2D2Q9BX73 214 aa7.92□□□□□ -1.14
DDX39A-219ENST00000592927 IGKV2D-24A0A075B6R9 120 aa7.91□□□□□ -1.14
DDX39A-219ENST00000592927 MYMXA0A1B0GTQ4 84 aa7.91□□□□□ -1.14
DDX39A-219ENST00000592927 COX7A2LO14548 114 aa7.91□□□□□ -1.14
DDX39A-219ENST00000592927 PSCAO43653 123 aa7.91□□□□□ -1.14
DDX39A-219ENST00000592927 HNRNPA3P51991 378 aaKnown RBP7.91□□□□□ -1.14
DDX39A-219ENST00000592927 C1orf43Q9BWL3 253 aa7.91□□□□□ -1.14
DDX39A-219ENST00000592927 COX11Q9Y6N1 276 aa7.91□□□□□ -1.14
DDX39A-219ENST00000592927 IGLV10-54A0A075B6I4 117 aa7.9□□□□□ -1.14
DDX39A-219ENST00000592927 IGHV3-64A0A075B6Q5 118 aa7.9□□□□□ -1.14
DDX39A-219ENST00000592927 ZNF815PA8K554 130 aa7.9□□□□□ -1.14
DDX39A-219ENST00000592927 TNP2Q05952 138 aa7.9□□□□□ -1.14
DDX39A-219ENST00000592927 Q6ZRN7 208 aaPredicted RBP7.9□□□□□ -1.14
DDX39A-219ENST00000592927 C5orf38Q86SI9 138 aa7.9□□□□□ -1.14
DDX39A-219ENST00000592927 HIGD1BQ9P298 99 aa7.9□□□□□ -1.14
DDX39A-219ENST00000592927 SRRM2Q9UQ35 2752 aaKnown RBP7.89□□□□□ -1.15
DDX39A-219ENST00000592927 GAGE12HA6NDE8 117 aa7.89□□□□□ -1.15
DDX39A-219ENST00000592927 APOMO95445 188 aa7.89□□□□□ -1.15
DDX39A-219ENST00000592927 TSPEAR-AS2P59090 65 aa7.89□□□□□ -1.15
DDX39A-219ENST00000592927 FOXI1Q12951 378 aa7.89□□□□□ -1.15
DDX39A-219ENST00000592927 MALP21145 153 aa7.88□□□□□ -1.15
DDX39A-219ENST00000592927 SFTA2Q6UW10 78 aa7.88□□□□□ -1.15
DDX39A-219ENST00000592927 COX7B2Q8TF08 81 aa7.88□□□□□ -1.15
DDX39A-219ENST00000592927 TTTY13Q9BZ97 58 aa7.88□□□□□ -1.15
DDX39A-219ENST00000592927 FAT1Q14517 4588 aa7.87□□□□□ -1.15
DDX39A-219ENST00000592927 NDUFA1O15239 70 aa7.87□□□□□ -1.15
DDX39A-219ENST00000592927 SCGB1D4Q6XE38 83 aa7.87□□□□□ -1.15
DDX39A-219ENST00000592927 C2orf91Q6ZV80 131 aa7.87□□□□□ -1.15
DDX39A-219ENST00000592927 Q8IZM0 81 aa7.87□□□□□ -1.15
DDX39A-219ENST00000592927 NDUFA12Q9UI09 145 aa7.87□□□□□ -1.15
DDX39A-219ENST00000592927 HMCN2Q8NDA2 5059 aa7.86□□□□□ -1.15
DDX39A-219ENST00000592927 HERV-K104P63124 156 aa7.86□□□□□ -1.15
DDX39A-219ENST00000592927 KRTAP26-1Q6PEX3 210 aa7.86□□□□□ -1.15
DDX39A-219ENST00000592927 J3QL48 77 aa7.85□□□□□ -1.15
DDX39A-219ENST00000592927 EREGO14944 169 aa7.85□□□□□ -1.15
DDX39A-219ENST00000592927 PRSS2P07478 247 aa7.85□□□□□ -1.15
DDX39A-219ENST00000592927 CXCL5P42830 114 aa7.85□□□□□ -1.15
DDX39A-219ENST00000592927 CTAG1AP78358 180 aa7.85□□□□□ -1.15
DDX39A-219ENST00000592927 ORAOV1Q8WV07 137 aa7.85□□□□□ -1.15
DDX39A-219ENST00000592927 A0A087WTM6 91 aa7.84□□□□□ -1.15
DDX39A-219ENST00000592927 A0A0J9YXY3 114 aa7.84□□□□□ -1.15
DDX39A-219ENST00000592927 TAL2Q16559 108 aa7.84□□□□□ -1.15
DDX39A-219ENST00000592927 C6orf226Q5I0X4 101 aa7.84□□□□□ -1.15
DDX39A-219ENST00000592927 ZNF625Q96I27 306 aaPredicted RBP7.84□□□□□ -1.15
DDX39A-219ENST00000592927 TOMM7Q9P0U1 55 aa7.84□□□□□ -1.15
DDX39A-219ENST00000592927 TP73-AS1Q9UF72 201 aa7.84□□□□□ -1.15
DDX39A-219ENST00000592927 LINC00587B1AMM8 73 aa7.83□□□□□ -1.16
DDX39A-219ENST00000592927 TIMM17BO60830 172 aa7.83□□□□□ -1.16
DDX39A-219ENST00000592927 HSD52Q0P140 79 aa7.83□□□□□ -1.16
DDX39A-219ENST00000592927 CFAP161Q6P656 301 aa7.83□□□□□ -1.16
DDX39A-219ENST00000592927 SPANXB1Q9NS25 103 aaPredicted RBP7.83□□□□□ -1.16
DDX39A-219ENST00000592927 LRCOL1A6NCL2 159 aa7.82□□□□□ -1.16
DDX39A-219ENST00000592927 TMEM238C9JI98 176 aa7.82□□□□□ -1.16
DDX39A-219ENST00000592927 M0R143 59 aa7.82□□□□□ -1.16
DDX39A-219ENST00000592927 LECT2O14960 151 aa7.82□□□□□ -1.16
DDX39A-219ENST00000592927 CIRBPQ14011 172 aaKnown RBP7.82□□□□□ -1.16
DDX39A-219ENST00000592927 KIAA0087Q14695 138 aa7.82□□□□□ -1.16
DDX39A-219ENST00000592927 F8WDY8 70 aa7.81□□□□□ -1.16
DDX39A-219ENST00000592927 CKS1BP61024 79 aa7.81□□□□□ -1.16
DDX39A-219ENST00000592927 SPAG11BQ08648 103 aa7.81□□□□□ -1.16
DDX39A-219ENST00000592927 Q5VSD8 79 aa7.81□□□□□ -1.16
DDX39A-219ENST00000592927 Q6ZVH6 145 aa7.81□□□□□ -1.16
DDX39A-219ENST00000592927 VPS13BQ7Z7G8 4022 aa7.81□□□□□ -1.16
DDX39A-219ENST00000592927 WFDC2Q14508 124 aa7.8□□□□□ -1.16
DDX39A-219ENST00000592927 HIST1H4GQ99525 98 aa7.8□□□□□ -1.16
DDX39A-219ENST00000592927 USP17L23D6RBM5 183 aa7.79□□□□□ -1.16
DDX39A-219ENST00000592927 ZNF561-AS1K7EIQ3 104 aa7.79□□□□□ -1.16
DDX39A-219ENST00000592927 SRSF9Q13242 221 aaKnown RBP eCLIP7.79□□□□□ -1.16
DDX39A-219ENST00000592927 C14orf177Q52M58 125 aa7.79□□□□□ -1.16
DDX39A-219ENST00000592927 MEIG1Q5JSS6 88 aa7.79□□□□□ -1.16
DDX39A-219ENST00000592927 Q8N814 137 aa7.79□□□□□ -1.16
DDX39A-219ENST00000592927 C2orf48Q96LS8 159 aa7.79□□□□□ -1.16
DDX39A-219ENST00000592927 SPANXDQ9BXN6 97 aa7.79□□□□□ -1.16
DDX39A-219ENST00000592927 SPANXCQ9NY87 97 aa7.79□□□□□ -1.16
DDX39A-219ENST00000592927 GVQW2A0A096LPI5 108 aaPredicted RBP7.78□□□□□ -1.16
DDX39A-219ENST00000592927 GCSHP23434 173 aa7.78□□□□□ -1.16
DDX39A-219ENST00000592927 CEND1Q8N111 149 aa7.78□□□□□ -1.16
DDX39A-219ENST00000592927 C15orf56Q8N910 161 aa7.78□□□□□ -1.16
DDX39A-219ENST00000592927 NTN5Q8WTR8 489 aaPredicted RBP7.78□□□□□ -1.16
DDX39A-219ENST00000592927 COPS9Q8WXC6 57 aa7.78□□□□□ -1.16
DDX39A-219ENST00000592927 FLG2Q5D862 2391 aaPredicted RBP7.77□□□□□ -1.17
DDX39A-219ENST00000592927 IFITM1P13164 125 aa7.77□□□□□ -1.17
DDX39A-219ENST00000592927 HINT1P49773 126 aaPredicted RBP7.77□□□□□ -1.17
DDX39A-219ENST00000592927 COX17Q14061 63 aa7.77□□□□□ -1.17
DDX39A-219ENST00000592927 BVES-AS1Q5T3Y7 98 aa7.77□□□□□ -1.17
DDX39A-219ENST00000592927 SERTAD4-AS1Q5TG53 156 aa7.77□□□□□ -1.17
DDX39A-219ENST00000592927 LITAFQ99732 161 aa7.77□□□□□ -1.17
DDX39A-219ENST00000592927 KRTAP10-2P60368 255 aa7.76□□□□□ -1.17
DDX39A-219ENST00000592927 LBHQ53QV2 105 aaPredicted RBP7.76□□□□□ -1.17
DDX39A-219ENST00000592927 SNHG12Q9BXW3 62 aa7.76□□□□□ -1.17
DDX39A-219ENST00000592927 PPDPFQ9H3Y8 114 aa7.76□□□□□ -1.17
DDX39A-219ENST00000592927 PGPEP1Q9NXJ5 209 aa7.76□□□□□ -1.17
DDX39A-219ENST00000592927 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.75□□□□□ -1.17
DDX39A-219ENST00000592927 TRBV30A0A0K0K1B3 111 aa7.75□□□□□ -1.17
DDX39A-219ENST00000592927 TMEM238LA0A1B0GVL6 79 aa7.75□□□□□ -1.17
DDX39A-219ENST00000592927 A6NJY4 79 aa7.75□□□□□ -1.17
DDX39A-219ENST00000592927 SMIM13P0DJ93 91 aa7.75□□□□□ -1.17
DDX39A-219ENST00000592927 PTTG1IPP53801 180 aa7.75□□□□□ -1.17
DDX39A-219ENST00000592927 C2orf82Q6UX34 121 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms