RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 EIF5A2Q9GZV4 153 aaKnown RBP5.18□□□□□ -1.58
SMAD4-215ENST00000592911 K7ERU9 68 aa5.17□□□□□ -1.58
SMAD4-215ENST00000592911 SCGB1A1P11684 91 aa5.17□□□□□ -1.58
SMAD4-215ENST00000592911 PMCHP20382 165 aa5.17□□□□□ -1.58
SMAD4-215ENST00000592911 UBE2V1Q13404 147 aa5.17□□□□□ -1.58
SMAD4-215ENST00000592911 TWIST1Q15672 202 aa5.17□□□□□ -1.58
SMAD4-215ENST00000592911 TPRXLQ17RH7 258 aa5.17□□□□□ -1.58
SMAD4-215ENST00000592911 CENPWQ5EE01 88 aa5.17□□□□□ -1.58
SMAD4-215ENST00000592911 LINC01551Q86U37 167 aa5.17□□□□□ -1.58
SMAD4-215ENST00000592911 RPP21Q9H633 154 aaKnown RBP5.17□□□□□ -1.58
SMAD4-215ENST00000592911 MUC17Q685J3 4493 aa5.17□□□□□ -1.58
SMAD4-215ENST00000592911 TRBV27A0A0K0K1C4 114 aa5.16□□□□□ -1.58
SMAD4-215ENST00000592911 C9JQL5 133 aa5.16□□□□□ -1.58
SMAD4-215ENST00000592911 NDUFA1O15239 70 aa5.16□□□□□ -1.58
SMAD4-215ENST00000592911 PDE6DO43924 150 aa5.16□□□□□ -1.58
SMAD4-215ENST00000592911 NUPR1O60356 82 aa5.16□□□□□ -1.58
SMAD4-215ENST00000592911 TRGC2P03986 189 aa5.16□□□□□ -1.58
SMAD4-215ENST00000592911 GNG4P50150 75 aa5.16□□□□□ -1.58
SMAD4-215ENST00000592911 ALKBH7Q9BT30 221 aaPredicted RBP5.16□□□□□ -1.58
SMAD4-215ENST00000592911 ZNF861PO60384 105 aa5.15□□□□□ -1.59
SMAD4-215ENST00000592911 PPP1R17O96001 155 aa5.15□□□□□ -1.59
SMAD4-215ENST00000592911 SPAG11BQ08648 103 aa5.15□□□□□ -1.59
SMAD4-215ENST00000592911 RPL39LQ96EH5 51 aaKnown RBP5.15□□□□□ -1.59
SMAD4-215ENST00000592911 VPS25Q9BRG1 176 aa5.15□□□□□ -1.59
SMAD4-215ENST00000592911 TIMM21Q9BVV7 248 aa5.15□□□□□ -1.59
SMAD4-215ENST00000592911 ST20Q9HBF5 79 aa5.15□□□□□ -1.59
SMAD4-215ENST00000592911 TSHBP01222 138 aa5.14□□□□□ -1.59
SMAD4-215ENST00000592911 POLR2KP53803 58 aaKnown RBP5.14□□□□□ -1.59
SMAD4-215ENST00000592911 TGIF2-C20orf24A0A0A6YYL0 155 aa5.13□□□□□ -1.59
SMAD4-215ENST00000592911 TRBV30A0A0K0K1B3 111 aa5.13□□□□□ -1.59
SMAD4-215ENST00000592911 M0QXV9 152 aa5.13□□□□□ -1.59
SMAD4-215ENST00000592911 SCGB1D1O95968 90 aa5.13□□□□□ -1.59
SMAD4-215ENST00000592911 CRYGAP11844 174 aa5.13□□□□□ -1.59
SMAD4-215ENST00000592911 UBE2BP63146 152 aa5.13□□□□□ -1.59
SMAD4-215ENST00000592911 TEX43Q6ZNM6 134 aa5.13□□□□□ -1.59
SMAD4-215ENST00000592911 FAM213BQ8TBF2 198 aa5.13□□□□□ -1.59
SMAD4-215ENST00000592911 CRCT1Q9UGL9 99 aa5.13□□□□□ -1.59
SMAD4-215ENST00000592911 VCYO14598 125 aa5.12□□□□□ -1.59
SMAD4-215ENST00000592911 SRP19P09132 144 aaKnown RBP5.12□□□□□ -1.59
SMAD4-215ENST00000592911 FOXA3P55318 350 aaPredicted RBP5.12□□□□□ -1.59
SMAD4-215ENST00000592911 PDZD11Q5EBL8 140 aa5.12□□□□□ -1.59
SMAD4-215ENST00000592911 MTURNQ8N3F0 131 aa5.12□□□□□ -1.59
SMAD4-215ENST00000592911 UQCR10Q9UDW1 63 aa5.12□□□□□ -1.59
SMAD4-215ENST00000592911 UBE2D4Q9Y2X8 147 aa5.12□□□□□ -1.59
SMAD4-215ENST00000592911 IGHV3OR16-9A0A0B4J2B5 98 aa5.11□□□□□ -1.59
SMAD4-215ENST00000592911 A0A1B0GV72 72 aa5.11□□□□□ -1.59
SMAD4-215ENST00000592911 NDUFC2-KCTD14E9PQ53 114 aa5.11□□□□□ -1.59
SMAD4-215ENST00000592911 KRTAP11-1Q8IUC1 163 aa5.11□□□□□ -1.59
SMAD4-215ENST00000592911 TYMSOSQ8TAI1 123 aa5.11□□□□□ -1.59
SMAD4-215ENST00000592911 KIR2DL4Q99706 377 aa5.11□□□□□ -1.59
SMAD4-215ENST00000592911 OPRPNQ99935 248 aaPredicted RBP5.11□□□□□ -1.59
SMAD4-215ENST00000592911 VAMP8Q9BV40 100 aa5.11□□□□□ -1.59
SMAD4-215ENST00000592911 KRTAP4-11Q9BYQ6 195 aa5.11□□□□□ -1.59
SMAD4-215ENST00000592911 TRBV20OR9-2A0A075B6H5 130 aa5.1□□□□□ -1.59
SMAD4-215ENST00000592911 A8MWL6 223 aa5.1□□□□□ -1.59
SMAD4-215ENST00000592911 RPL28P46779 137 aaKnown RBP5.1□□□□□ -1.59
SMAD4-215ENST00000592911 FAM229BQ4G0N7 80 aa5.1□□□□□ -1.59
SMAD4-215ENST00000592911 OCIAD2Q56VL3 154 aa5.1□□□□□ -1.59
SMAD4-215ENST00000592911 FAM19A5Q7Z5A7 132 aaPredicted RBP5.1□□□□□ -1.59
SMAD4-215ENST00000592911 C5orf38Q86SI9 138 aa5.1□□□□□ -1.59
SMAD4-215ENST00000592911 BORCS7Q96B45 105 aa5.1□□□□□ -1.59
SMAD4-215ENST00000592911 TMEM191AQ9H0A3 160 aa5.1□□□□□ -1.59
SMAD4-215ENST00000592911 GNG13Q9P2W3 67 aa5.1□□□□□ -1.59
SMAD4-215ENST00000592911 TP73-AS1Q9UF72 201 aa5.1□□□□□ -1.59
SMAD4-215ENST00000592911 TRAV13-1A0A0B4J241 112 aa5.09□□□□□ -1.59
SMAD4-215ENST00000592911 FAM168BA1KXE4 195 aa5.09□□□□□ -1.59
SMAD4-215ENST00000592911 ZNF727A8MUV8 499 aa5.09□□□□□ -1.59
SMAD4-215ENST00000592911 TSPAN13O95857 204 aa5.09□□□□□ -1.59
SMAD4-215ENST00000592911 FCER1GP30273 86 aa5.09□□□□□ -1.59
SMAD4-215ENST00000592911 LINC01547P58512 204 aaPredicted RBP5.09□□□□□ -1.59
SMAD4-215ENST00000592911 FAM231DQ6ZW35 169 aa5.09□□□□□ -1.59
SMAD4-215ENST00000592911 LINC01561Q8N1V8 128 aa5.09□□□□□ -1.59
SMAD4-215ENST00000592911 C6orf48Q9UBA6 75 aa5.09□□□□□ -1.59
SMAD4-215ENST00000592911 A0A1B0GV50 99 aa5.08□□□□□ -1.6
SMAD4-215ENST00000592911 RPL32P62910 135 aaKnown RBP5.08□□□□□ -1.6
SMAD4-215ENST00000592911 MRPS36P82909 103 aaKnown RBP5.08□□□□□ -1.6
SMAD4-215ENST00000592911 KRTAP7-1Q8IUC3 87 aa5.08□□□□□ -1.6
SMAD4-215ENST00000592911 KRTAP4-2Q9BYR5 136 aa5.08□□□□□ -1.6
SMAD4-215ENST00000592911 RNASE7Q9H1E1 156 aaKnown RBP5.08□□□□□ -1.6
SMAD4-215ENST00000592911 CST9LQ9H4G1 147 aa5.08□□□□□ -1.6
SMAD4-215ENST00000592911 SPANXA1Q9NS26 97 aa5.08□□□□□ -1.6
SMAD4-215ENST00000592911 LAMTOR2Q9Y2Q5 125 aa5.08□□□□□ -1.6
SMAD4-215ENST00000592911 FSIP2Q5CZC0 6907 aa5.07□□□□□ -1.6
SMAD4-215ENST00000592911 TRAV9-1A0A075B6T8 112 aa5.07□□□□□ -1.6
SMAD4-215ENST00000592911 A0A087X002 238 aa5.07□□□□□ -1.6
SMAD4-215ENST00000592911 H0Y8G0 127 aa5.07□□□□□ -1.6
SMAD4-215ENST00000592911 SUMO2P61956 95 aaKnown RBP5.07□□□□□ -1.6
SMAD4-215ENST00000592911 GAGE2EQ4V326 116 aa5.07□□□□□ -1.6
SMAD4-215ENST00000592911 GAGE2DQ9UEU5 116 aa5.07□□□□□ -1.6
SMAD4-215ENST00000592911 NAT8Q9UHE5 227 aa5.07□□□□□ -1.6
SMAD4-215ENST00000592911 IGLV7-46A0A075B6I9 117 aa5.06□□□□□ -1.6
SMAD4-215ENST00000592911 A0A1B0GUT8 65 aa5.06□□□□□ -1.6
SMAD4-215ENST00000592911 BCE1O60756 84 aa5.06□□□□□ -1.6
SMAD4-215ENST00000592911 BATFQ16520 125 aa5.06□□□□□ -1.6
SMAD4-215ENST00000592911 UNQ6190/PRO20217Q6UXQ8 127 aa5.06□□□□□ -1.6
SMAD4-215ENST00000592911 Q6ZUT4 128 aa5.06□□□□□ -1.6
SMAD4-215ENST00000592911 LINC00173Q6ZV60 143 aa5.06□□□□□ -1.6
SMAD4-215ENST00000592911 FP248Q71RG6 208 aaPredicted RBP5.06□□□□□ -1.6
SMAD4-215ENST00000592911 LINC00304Q8N9R0 145 aa5.06□□□□□ -1.6
SMAD4-215ENST00000592911 C20orf78Q9BR46 151 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms