RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 NPSP0C0P6 89 aa8.59□□□□□ -1.03
APOC1-208ENST00000592535 TLX1NBP0CAT3 122 aa8.58□□□□□ -1.04
APOC1-208ENST00000592535 LINC00310P59036 64 aa8.58□□□□□ -1.04
APOC1-208ENST00000592535 SPINK6Q6UWN8 80 aa8.58□□□□□ -1.04
APOC1-208ENST00000592535 C2orf82Q6UX34 121 aa8.58□□□□□ -1.04
APOC1-208ENST00000592535 PHF5AQ7RTV0 110 aaKnown RBP8.58□□□□□ -1.04
APOC1-208ENST00000592535 LINC01561Q8N1V8 128 aa8.58□□□□□ -1.04
APOC1-208ENST00000592535 TOMM6Q96B49 74 aa8.58□□□□□ -1.04
APOC1-208ENST00000592535 FAM168BA1KXE4 195 aa8.57□□□□□ -1.04
APOC1-208ENST00000592535 G0S2P27469 103 aa8.57□□□□□ -1.04
APOC1-208ENST00000592535 SRSF9Q13242 221 aaKnown RBP eCLIP8.57□□□□□ -1.04
APOC1-208ENST00000592535 GAGE2EQ4V326 116 aa8.57□□□□□ -1.04
APOC1-208ENST00000592535 FAM19A3Q7Z5A8 133 aa8.57□□□□□ -1.04
APOC1-208ENST00000592535 TIMM17AQ99595 171 aa8.57□□□□□ -1.04
APOC1-208ENST00000592535 GAGE2DQ9UEU5 116 aa8.57□□□□□ -1.04
APOC1-208ENST00000592535 NUPR1O60356 82 aa8.56□□□□□ -1.04
APOC1-208ENST00000592535 LINC00614P0C842 121 aa8.56□□□□□ -1.04
APOC1-208ENST00000592535 NDUFA6P56556 154 aa8.56□□□□□ -1.04
APOC1-208ENST00000592535 PAPPA-AS1Q5QFB9 102 aa8.56□□□□□ -1.04
APOC1-208ENST00000592535 LINC01600Q96MT4 127 aa8.56□□□□□ -1.04
APOC1-208ENST00000592535 PSORS1C2Q9UIG4 136 aa8.56□□□□□ -1.04
APOC1-208ENST00000592535 PLA2G2DQ9UNK4 145 aa8.56□□□□□ -1.04
APOC1-208ENST00000592535 TRBV30A0A0K0K1B3 111 aa8.55□□□□□ -1.04
APOC1-208ENST00000592535 BAGE3Q86Y29 109 aa8.55□□□□□ -1.04
APOC1-208ENST00000592535 SCGB3A1Q96QR1 104 aa8.55□□□□□ -1.04
APOC1-208ENST00000592535 TOMM7Q9P0U1 55 aa8.55□□□□□ -1.04
APOC1-208ENST00000592535 HMCN2Q8NDA2 5059 aa8.54□□□□□ -1.04
APOC1-208ENST00000592535 C5orf52A6NGY3 159 aa8.54□□□□□ -1.04
APOC1-208ENST00000592535 SERF1AO75920 110 aa8.54□□□□□ -1.04
APOC1-208ENST00000592535 HERVK_113P63121 156 aa8.54□□□□□ -1.04
APOC1-208ENST00000592535 ERASQ7Z444 233 aa8.54□□□□□ -1.04
APOC1-208ENST00000592535 FAM19A5Q7Z5A7 132 aaPredicted RBP8.54□□□□□ -1.04
APOC1-208ENST00000592535 CHCHD1Q96BP2 118 aaKnown RBP8.54□□□□□ -1.04
APOC1-208ENST00000592535 PACRGQ96M98 296 aaPredicted RBP8.54□□□□□ -1.04
APOC1-208ENST00000592535 CDKN2A-AS1Q9UH64 79 aa8.54□□□□□ -1.04
APOC1-208ENST00000592535 NDUFC2-KCTD14E9PQ53 114 aa8.53□□□□□ -1.04
APOC1-208ENST00000592535 PRSS2P07478 247 aa8.53□□□□□ -1.04
APOC1-208ENST00000592535 SEC11AP67812 179 aa8.53□□□□□ -1.04
APOC1-208ENST00000592535 REG3GQ6UW15 175 aa8.53□□□□□ -1.04
APOC1-208ENST00000592535 KRTAP7-1Q8IUC3 87 aa8.53□□□□□ -1.04
APOC1-208ENST00000592535 GEMIN7Q9H840 131 aaKnown RBP8.53□□□□□ -1.04
APOC1-208ENST00000592535 CKS1BP61024 79 aa8.52□□□□□ -1.05
APOC1-208ENST00000592535 C1orf137Q5JT78 98 aa8.52□□□□□ -1.05
APOC1-208ENST00000592535 KRTAP11-1Q8IUC1 163 aa8.52□□□□□ -1.05
APOC1-208ENST00000592535 Q8IZM0 81 aa8.52□□□□□ -1.05
APOC1-208ENST00000592535 TMA7Q9Y2S6 64 aaKnown RBP8.52□□□□□ -1.05
APOC1-208ENST00000592535 A0A096LNJ9 63 aa8.51□□□□□ -1.05
APOC1-208ENST00000592535 SNRPEP62304 92 aaKnown RBP8.51□□□□□ -1.05
APOC1-208ENST00000592535 C6orf226Q5I0X4 101 aa8.51□□□□□ -1.05
APOC1-208ENST00000592535 C9orf129Q5T035 196 aaKnown RBP8.51□□□□□ -1.05
APOC1-208ENST00000592535 FA2HQ7L5A8 372 aa8.51□□□□□ -1.05
APOC1-208ENST00000592535 TNXBP22105 4242 aa8.5□□□□□ -1.05
APOC1-208ENST00000592535 S100A6P06703 90 aa8.5□□□□□ -1.05
APOC1-208ENST00000592535 LINC00469Q8N7U9 141 aa8.5□□□□□ -1.05
APOC1-208ENST00000592535 LINC01549A6NIU2 74 aa8.49□□□□□ -1.05
APOC1-208ENST00000592535 M0QXV9 152 aa8.49□□□□□ -1.05
APOC1-208ENST00000592535 KRTAP10-8P60410 259 aa8.49□□□□□ -1.05
APOC1-208ENST00000592535 ODF1Q14990 250 aa8.49□□□□□ -1.05
APOC1-208ENST00000592535 HIST3H2BBQ8N257 126 aa8.49□□□□□ -1.05
APOC1-208ENST00000592535 TINCRA0A1B0GVN0 87 aa8.48□□□□□ -1.05
APOC1-208ENST00000592535 SMIM1B2RUZ4 78 aa8.48□□□□□ -1.05
APOC1-208ENST00000592535 HSBP1O75506 76 aa8.48□□□□□ -1.05
APOC1-208ENST00000592535 CST9LQ9H4G1 147 aa8.48□□□□□ -1.05
APOC1-208ENST00000592535 IGLV5-45A0A087WSX0 123 aa8.47□□□□□ -1.05
APOC1-208ENST00000592535 F8VRH5 84 aa8.47□□□□□ -1.05
APOC1-208ENST00000592535 IGLV7-43P04211 117 aa8.47□□□□□ -1.05
APOC1-208ENST00000592535 PDZD11Q5EBL8 140 aa8.47□□□□□ -1.05
APOC1-208ENST00000592535 FAM19A2Q8N3H0 131 aa8.47□□□□□ -1.05
APOC1-208ENST00000592535 CXCL5P42830 114 aa8.46□□□□□ -1.06
APOC1-208ENST00000592535 UBE2BP63146 152 aa8.46□□□□□ -1.06
APOC1-208ENST00000592535 PMVKQ15126 192 aa8.46□□□□□ -1.06
APOC1-208ENST00000592535 XAGE1AQ9HD64 81 aa8.46□□□□□ -1.06
APOC1-208ENST00000592535 SPINK8P0C7L1 97 aa8.45□□□□□ -1.06
APOC1-208ENST00000592535 PMCHL1Q16048 86 aa8.45□□□□□ -1.06
APOC1-208ENST00000592535 COX7B2Q8TF08 81 aa8.45□□□□□ -1.06
APOC1-208ENST00000592535 HIST1H2BLQ99880 126 aa8.45□□□□□ -1.06
APOC1-208ENST00000592535 HBDP02042 147 aa8.44□□□□□ -1.06
APOC1-208ENST00000592535 DIRC1Q969H9 104 aa8.43□□□□□ -1.06
APOC1-208ENST00000592535 C22orf24Q9Y442 160 aa8.42□□□□□ -1.06
APOC1-208ENST00000592535 H0Y9J4 135 aa8.41□□□□□ -1.06
APOC1-208ENST00000592535 LEPROTL1O95214 131 aa8.41□□□□□ -1.06
APOC1-208ENST00000592535 IGLC3P0DOY3 106 aa8.41□□□□□ -1.06
APOC1-208ENST00000592535 LOC105371267A0A1B0GV96 52 aa8.4□□□□□ -1.06
APOC1-208ENST00000592535 H3BRM9 83 aa8.4□□□□□ -1.06
APOC1-208ENST00000592535 FABP4P15090 132 aa8.4□□□□□ -1.06
APOC1-208ENST00000592535 S100A2P29034 98 aa8.4□□□□□ -1.06
APOC1-208ENST00000592535 ATP5LO75964 103 aa8.39□□□□□ -1.07
APOC1-208ENST00000592535 ZNF22P17026 224 aaPredicted RBP8.39□□□□□ -1.07
APOC1-208ENST00000592535 HSPB8Q9UJY1 196 aa8.39□□□□□ -1.07
APOC1-208ENST00000592535 LBHQ53QV2 105 aaPredicted RBP8.38□□□□□ -1.07
APOC1-208ENST00000592535 PRR26Q8N8Z3 221 aa8.38□□□□□ -1.07
APOC1-208ENST00000592535 IFI27L1Q96BM0 104 aa8.38□□□□□ -1.07
APOC1-208ENST00000592535 IGLV5-39A0A0G2JS06 123 aa8.37□□□□□ -1.07
APOC1-208ENST00000592535 C3orf79P0CE67 100 aa8.37□□□□□ -1.07
APOC1-208ENST00000592535 MRPL55Q7Z7F7 128 aaKnown RBP8.37□□□□□ -1.07
APOC1-208ENST00000592535 TP73-AS1Q9UF72 201 aa8.37□□□□□ -1.07
APOC1-208ENST00000592535 KRTAP1-4P0C5Y4 121 aa8.36□□□□□ -1.07
APOC1-208ENST00000592535 C11orf86A6NJI1 115 aa8.35□□□□□ -1.07
APOC1-208ENST00000592535 SYS1-DBNDD2H3BUS1 97 aa8.35□□□□□ -1.07
APOC1-208ENST00000592535 UBR4Q5T4S7 5183 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms