RNA–Protein interactions for RNA: ENST00000591309.5

ERCC2-212, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC2, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-212ENST00000591309 FAT1Q14517 4588 aa13.06□□□□□ -0.32
ERCC2-212ENST00000591309 IGLV5-45A0A087WSX0 123 aa13.06□□□□□ -0.32
ERCC2-212ENST00000591309 CXCL5P42830 114 aa13.06□□□□□ -0.32
ERCC2-212ENST00000591309 SPINK8P0C7L1 97 aa13.05□□□□□ -0.32
ERCC2-212ENST00000591309 TLX1NBP0CAT3 122 aa13.05□□□□□ -0.32
ERCC2-212ENST00000591309 IGLC3P0DOY3 106 aa13.05□□□□□ -0.32
ERCC2-212ENST00000591309 SMIM1B2RUZ4 78 aa13.04□□□□□ -0.32
ERCC2-212ENST00000591309 SCO1O75880 301 aa13.04□□□□□ -0.32
ERCC2-212ENST00000591309 GAGE2EQ4V326 116 aa13.04□□□□□ -0.32
ERCC2-212ENST00000591309 COX7B2Q8TF08 81 aa13.04□□□□□ -0.32
ERCC2-212ENST00000591309 IFI27L1Q96BM0 104 aa13.04□□□□□ -0.32
ERCC2-212ENST00000591309 GAGE2DQ9UEU5 116 aa13.04□□□□□ -0.32
ERCC2-212ENST00000591309 ABCA13Q86UQ4 5058 aa13.04□□□□□ -0.32
ERCC2-212ENST00000591309 PCLOQ9Y6V0 5065 aa13.03□□□□□ -0.32
ERCC2-212ENST00000591309 FAM19A2Q8N3H0 131 aa13.03□□□□□ -0.32
ERCC2-212ENST00000591309 F8VRH5 84 aa13.02□□□□□ -0.33
ERCC2-212ENST00000591309 CHTOPQ9Y3Y2 248 aaKnown RBP13.02□□□□□ -0.33
ERCC2-212ENST00000591309 NDUFC2-KCTD14E9PQ53 114 aa13.01□□□□□ -0.33
ERCC2-212ENST00000591309 SERF1AO75920 110 aa13.01□□□□□ -0.33
ERCC2-212ENST00000591309 C9orf116Q5BN46 136 aaPredicted RBP13.01□□□□□ -0.33
ERCC2-212ENST00000591309 Q6ZRP5 223 aa13.01□□□□□ -0.33
ERCC2-212ENST00000591309 TMEM170BQ5T4T1 132 aa13□□□□□ -0.33
ERCC2-212ENST00000591309 LEPROTL1O95214 131 aa12.99□□□□□ -0.33
ERCC2-212ENST00000591309 ZNF22P17026 224 aaPredicted RBP12.99□□□□□ -0.33
ERCC2-212ENST00000591309 TRAV12-1A0A0B4J245 112 aa12.98□□□□□ -0.33
ERCC2-212ENST00000591309 A0A1W2PNN7 141 aa12.98□□□□□ -0.33
ERCC2-212ENST00000591309 C11orf86A6NJI1 115 aa12.97□□□□□ -0.33
ERCC2-212ENST00000591309 KRTAP10-4P60372 401 aaPredicted RBP12.96□□□□□ -0.33
ERCC2-212ENST00000591309 H0Y8G0 127 aa12.95□□□□□ -0.34
ERCC2-212ENST00000591309 HSPB8Q9UJY1 196 aa12.95□□□□□ -0.34
ERCC2-212ENST00000591309 SRRM2Q9UQ35 2752 aaKnown RBP12.94□□□□□ -0.34
ERCC2-212ENST00000591309 VPS13BQ7Z7G8 4022 aa12.94□□□□□ -0.34
ERCC2-212ENST00000591309 FLG2Q5D862 2391 aaPredicted RBP12.94□□□□□ -0.34
ERCC2-212ENST00000591309 FABP4P15090 132 aa12.93□□□□□ -0.34
ERCC2-212ENST00000591309 FAM19A5Q7Z5A7 132 aaPredicted RBP12.93□□□□□ -0.34
ERCC2-212ENST00000591309 IGLV5-39A0A0G2JS06 123 aa12.92□□□□□ -0.34
ERCC2-212ENST00000591309 LINC00310P59036 64 aa12.92□□□□□ -0.34
ERCC2-212ENST00000591309 PHF5AQ7RTV0 110 aaKnown RBP12.91□□□□□ -0.34
ERCC2-212ENST00000591309 FAM168BA1KXE4 195 aa12.9□□□□□ -0.34
ERCC2-212ENST00000591309 NUPR1O60356 82 aa12.9□□□□□ -0.34
ERCC2-212ENST00000591309 HIST1H2BKO60814 126 aa12.9□□□□□ -0.34
ERCC2-212ENST00000591309 HIST1H2BJP06899 126 aa12.9□□□□□ -0.34
ERCC2-212ENST00000591309 HIST1H2BOP23527 126 aa12.9□□□□□ -0.34
ERCC2-212ENST00000591309 HIST1H2BBP33778 126 aa12.9□□□□□ -0.34
ERCC2-212ENST00000591309 HIST1H2BDP58876 126 aa12.9□□□□□ -0.34
ERCC2-212ENST00000591309 HIST1H2BCP62807 126 aa12.9□□□□□ -0.34
ERCC2-212ENST00000591309 HIST2H2BEQ16778 126 aa12.9□□□□□ -0.34
ERCC2-212ENST00000591309 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.9□□□□□ -0.34
ERCC2-212ENST00000591309 HIST1H2BHQ93079 126 aa12.9□□□□□ -0.34
ERCC2-212ENST00000591309 HIST1H2BNQ99877 126 aa12.9□□□□□ -0.34
ERCC2-212ENST00000591309 HIST1H2BMQ99879 126 aa12.9□□□□□ -0.34
ERCC2-212ENST00000591309 J3QL48 77 aa12.89□□□□□ -0.35
ERCC2-212ENST00000591309 S100A1P23297 94 aa12.89□□□□□ -0.35
ERCC2-212ENST00000591309 PRR3P79522 188 aaKnown RBP12.89□□□□□ -0.35
ERCC2-212ENST00000591309 SFTA2Q6UW10 78 aa12.89□□□□□ -0.35
ERCC2-212ENST00000591309 XAGE1AQ9HD64 81 aa12.89□□□□□ -0.35
ERCC2-212ENST00000591309 C9orf129Q5T035 196 aaKnown RBP12.88□□□□□ -0.35
ERCC2-212ENST00000591309 M0QXV9 152 aa12.87□□□□□ -0.35
ERCC2-212ENST00000591309 MAP1LC3CQ9BXW4 147 aa12.87□□□□□ -0.35
ERCC2-212ENST00000591309 TMEM223A0PJW6 202 aa12.86□□□□□ -0.35
ERCC2-212ENST00000591309 HNRNPA3P51991 378 aaKnown RBP12.86□□□□□ -0.35
ERCC2-212ENST00000591309 UBE2BP63146 152 aa12.86□□□□□ -0.35
ERCC2-212ENST00000591309 ODF1Q14990 250 aa12.86□□□□□ -0.35
ERCC2-212ENST00000591309 PLNP26678 52 aa12.84□□□□□ -0.35
ERCC2-212ENST00000591309 PFN2P35080 140 aa12.84□□□□□ -0.35
ERCC2-212ENST00000591309 OXTP01178 125 aa12.83□□□□□ -0.36
ERCC2-212ENST00000591309 ZNF625Q96I27 306 aaPredicted RBP12.83□□□□□ -0.36
ERCC2-212ENST00000591309 ERG28Q9UKR5 140 aa12.83□□□□□ -0.36
ERCC2-212ENST00000591309 KRTAP29-1A8MX34 341 aaPredicted RBP12.82□□□□□ -0.36
ERCC2-212ENST00000591309 DPM2O94777 84 aa12.82□□□□□ -0.36
ERCC2-212ENST00000591309 LBHQ53QV2 105 aaPredicted RBP12.82□□□□□ -0.36
ERCC2-212ENST00000591309 PSORS1C2Q9UIG4 136 aa12.82□□□□□ -0.36
ERCC2-212ENST00000591309 COX17Q14061 63 aa12.81□□□□□ -0.36
ERCC2-212ENST00000591309 C1orf137Q5JT78 98 aa12.81□□□□□ -0.36
ERCC2-212ENST00000591309 ATP6V1G1O75348 118 aa12.8□□□□□ -0.36
ERCC2-212ENST00000591309 HERVK_113P61574 105 aa12.8□□□□□ -0.36
ERCC2-212ENST00000591309 IGKCP01834 107 aa12.79□□□□□ -0.36
ERCC2-212ENST00000591309 SERTAD4-AS1Q5TG53 156 aa12.79□□□□□ -0.36
ERCC2-212ENST00000591309 SPINK6Q6UWN8 80 aa12.79□□□□□ -0.36
ERCC2-212ENST00000591309 C22orf24Q9Y442 160 aa12.79□□□□□ -0.36
ERCC2-212ENST00000591309 KRTAP7-1Q8IUC3 87 aa12.78□□□□□ -0.36
ERCC2-212ENST00000591309 PMCHL2Q9BQD1 86 aa12.78□□□□□ -0.36
ERCC2-212ENST00000591309 LINC00158P58513 81 aa12.77□□□□□ -0.37
ERCC2-212ENST00000591309 NKAPP1Q8N9T2 125 aa12.77□□□□□ -0.37
ERCC2-212ENST00000591309 MEIG1Q5JSS6 88 aa12.76□□□□□ -0.37
ERCC2-212ENST00000591309 PLEKHB2Q96CS7 222 aa12.76□□□□□ -0.37
ERCC2-212ENST00000591309 TP73-AS1Q9UF72 201 aa12.76□□□□□ -0.37
ERCC2-212ENST00000591309 PLA2G2DQ9UNK4 145 aa12.76□□□□□ -0.37
ERCC2-212ENST00000591309 MYMXA0A1B0GTQ4 84 aa12.75□□□□□ -0.37
ERCC2-212ENST00000591309 LINC00587B1AMM8 73 aa12.75□□□□□ -0.37
ERCC2-212ENST00000591309 HERV-K104P63124 156 aa12.75□□□□□ -0.37
ERCC2-212ENST00000591309 MRPL55Q7Z7F7 128 aaKnown RBP12.75□□□□□ -0.37
ERCC2-212ENST00000591309 DMBT1Q9UGM3 2413 aaPredicted RBP12.75□□□□□ -0.37
ERCC2-212ENST00000591309 NDUFA12Q9UI09 145 aa12.75□□□□□ -0.37
ERCC2-212ENST00000591309 SYS1-DBNDD2H3BUS1 97 aa12.74□□□□□ -0.37
ERCC2-212ENST00000591309 LEPROTO15243 131 aa12.74□□□□□ -0.37
ERCC2-212ENST00000591309 REG3GQ6UW15 175 aa12.74□□□□□ -0.37
ERCC2-212ENST00000591309 COA6Q5JTJ3 125 aaKnown RBP12.73□□□□□ -0.37
ERCC2-212ENST00000591309 SND1-IT1Q9HBX3 110 aa12.73□□□□□ -0.37
ERCC2-212ENST00000591309 A0A0U1RRA0 63 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms