RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 HIST2H2BEQ16778 126 aa14.95□□□□□ -0.02
LSM7-205ENST00000589532 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.95□□□□□ -0.02
LSM7-205ENST00000589532 HIST1H2BHQ93079 126 aa14.95□□□□□ -0.02
LSM7-205ENST00000589532 IFI27L1Q96BM0 104 aa14.95□□□□□ -0.02
LSM7-205ENST00000589532 C2orf48Q96LS8 159 aa14.95□□□□□ -0.02
LSM7-205ENST00000589532 HIST1H2BNQ99877 126 aa14.95□□□□□ -0.02
LSM7-205ENST00000589532 HIST1H2BMQ99879 126 aa14.95□□□□□ -0.02
LSM7-205ENST00000589532 FAM19A2Q8N3H0 131 aa14.94□□□□□ -0.02
LSM7-205ENST00000589532 LEPROTL1O95214 131 aa14.93□□□□□ -0.02
LSM7-205ENST00000589532 SYCNQ0VAF6 134 aa14.93□□□□□ -0.02
LSM7-205ENST00000589532 LINC00469Q8N7U9 141 aa14.93□□□□□ -0.02
LSM7-205ENST00000589532 CAMK2N2Q96S95 79 aa14.93□□□□□ -0.02
LSM7-205ENST00000589532 HSPB8Q9UJY1 196 aa14.93□□□□□ -0.02
LSM7-205ENST00000589532 IGLV4-69A0A075B6H9 119 aa14.92□□□□□ -0.02
LSM7-205ENST00000589532 H3BRM9 83 aa14.92□□□□□ -0.02
LSM7-205ENST00000589532 CARD19Q96LW7 228 aa14.92□□□□□ -0.02
LSM7-205ENST00000589532 A0A096LNI7 61 aa14.9□□□□□ -0.02
LSM7-205ENST00000589532 TRAV12-1A0A0B4J245 112 aa14.9□□□□□ -0.02
LSM7-205ENST00000589532 PRSS2P07478 247 aa14.9□□□□□ -0.02
LSM7-205ENST00000589532 DPH3Q96FX2 82 aa14.9□□□□□ -0.02
LSM7-205ENST00000589532 CDKN2A-AS1Q9UH64 79 aa14.9□□□□□ -0.02
LSM7-205ENST00000589532 IGKV2-24A0A0C4DH68 120 aa14.89□□□□□ -0.03
LSM7-205ENST00000589532 IGLC3P0DOY3 106 aa14.89□□□□□ -0.03
LSM7-205ENST00000589532 LINC00310P59036 64 aa14.89□□□□□ -0.03
LSM7-205ENST00000589532 PRR3P79522 188 aaKnown RBP14.89□□□□□ -0.03
LSM7-205ENST00000589532 MAJINQ3KP22 176 aa14.89□□□□□ -0.03
LSM7-205ENST00000589532 C7orf33Q8WU49 177 aa14.89□□□□□ -0.03
LSM7-205ENST00000589532 IGLV5-45A0A087WSX0 123 aa14.88□□□□□ -0.03
LSM7-205ENST00000589532 NDUFA1O15239 70 aa14.88□□□□□ -0.03
LSM7-205ENST00000589532 LINC00526Q96FQ7 95 aa14.88□□□□□ -0.03
LSM7-205ENST00000589532 CHTOPQ9Y3Y2 248 aaKnown RBP14.88□□□□□ -0.03
LSM7-205ENST00000589532 STPG4Q8N801 248 aa14.86□□□□□ -0.03
LSM7-205ENST00000589532 TOMM7Q9P0U1 55 aa14.85□□□□□ -0.03
LSM7-205ENST00000589532 NUPR1O60356 82 aa14.84□□□□□ -0.03
LSM7-205ENST00000589532 FABP4P15090 132 aa14.84□□□□□ -0.03
LSM7-205ENST00000589532 RNF151Q2KHN1 245 aa14.84□□□□□ -0.03
LSM7-205ENST00000589532 C6orf226Q5I0X4 101 aa14.84□□□□□ -0.03
LSM7-205ENST00000589532 Q8IZM0 81 aa14.84□□□□□ -0.03
LSM7-205ENST00000589532 CKS1BP61024 79 aa14.83□□□□□ -0.04
LSM7-205ENST00000589532 MRPL35Q9NZE8 188 aaKnown RBP14.83□□□□□ -0.04
LSM7-205ENST00000589532 F8VRH5 84 aa14.82□□□□□ -0.04
LSM7-205ENST00000589532 CXCL5P42830 114 aa14.82□□□□□ -0.04
LSM7-205ENST00000589532 COA6Q5JTJ3 125 aaKnown RBP14.82□□□□□ -0.04
LSM7-205ENST00000589532 MAP1LC3CQ9BXW4 147 aa14.82□□□□□ -0.04
LSM7-205ENST00000589532 SMIM1B2RUZ4 78 aa14.81□□□□□ -0.04
LSM7-205ENST00000589532 LINC00474Q9P2X8 69 aa14.81□□□□□ -0.04
LSM7-205ENST00000589532 RNF213Q63HN8 5207 aa14.81□□□□□ -0.04
LSM7-205ENST00000589532 LOC107984640A0A0U1RRK4 108 aa14.8□□□□□ -0.04
LSM7-205ENST00000589532 KIAA0087Q14695 138 aa14.8□□□□□ -0.04
LSM7-205ENST00000589532 TMEM170BQ5T4T1 132 aa14.8□□□□□ -0.04
LSM7-205ENST00000589532 LINC01600Q96MT4 127 aa14.8□□□□□ -0.04
LSM7-205ENST00000589532 TRBV30A0A0K0K1B3 111 aa14.79□□□□□ -0.04
LSM7-205ENST00000589532 H0Y8G0 127 aa14.79□□□□□ -0.04
LSM7-205ENST00000589532 ZNF22P17026 224 aaPredicted RBP14.79□□□□□ -0.04
LSM7-205ENST00000589532 C11orf86A6NJI1 115 aa14.78□□□□□ -0.04
LSM7-205ENST00000589532 SPINK8P0C7L1 97 aa14.78□□□□□ -0.04
LSM7-205ENST00000589532 COX7B2Q8TF08 81 aa14.78□□□□□ -0.04
LSM7-205ENST00000589532 UNQ6190/PRO20217Q6UXQ8 127 aa14.76□□□□□ -0.05
LSM7-205ENST00000589532 PLNP26678 52 aa14.75□□□□□ -0.05
LSM7-205ENST00000589532 ODF1Q14990 250 aa14.75□□□□□ -0.05
LSM7-205ENST00000589532 PTTG1IPP53801 180 aa14.73□□□□□ -0.05
LSM7-205ENST00000589532 C2orf82Q6UX34 121 aa14.73□□□□□ -0.05
LSM7-205ENST00000589532 C6orf48Q9UBA6 75 aa14.73□□□□□ -0.05
LSM7-205ENST00000589532 S100A6P06703 90 aa14.72□□□□□ -0.05
LSM7-205ENST00000589532 RPL18AQ02543 176 aaKnown RBP14.72□□□□□ -0.05
LSM7-205ENST00000589532 SFTA2Q6UW10 78 aa14.72□□□□□ -0.05
LSM7-205ENST00000589532 IGLV5-39A0A0G2JS06 123 aa14.71□□□□□ -0.05
LSM7-205ENST00000589532 DPM2O94777 84 aa14.71□□□□□ -0.05
LSM7-205ENST00000589532 TLX1NBP0CAT3 122 aa14.71□□□□□ -0.05
LSM7-205ENST00000589532 GAGE2BQ13066 116 aa14.71□□□□□ -0.05
LSM7-205ENST00000589532 SRSF9Q13242 221 aaKnown RBP eCLIP14.71□□□□□ -0.05
LSM7-205ENST00000589532 C10orf25Q5T742 122 aa14.71□□□□□ -0.05
LSM7-205ENST00000589532 SPINK6Q6UWN8 80 aa14.71□□□□□ -0.05
LSM7-205ENST00000589532 SYS1-DBNDD2H3BUS1 97 aa14.69□□□□□ -0.06
LSM7-205ENST00000589532 KRTAP10-8P60410 259 aa14.69□□□□□ -0.06
LSM7-205ENST00000589532 TMEM223A0PJW6 202 aa14.68□□□□□ -0.06
LSM7-205ENST00000589532 HERVK_113P61574 105 aa14.68□□□□□ -0.06
LSM7-205ENST00000589532 PET117Q6UWS5 81 aa14.68□□□□□ -0.06
LSM7-205ENST00000589532 Q6ZRP5 223 aa14.68□□□□□ -0.06
LSM7-205ENST00000589532 NDUFC2-KCTD14E9PQ53 114 aa14.67□□□□□ -0.06
LSM7-205ENST00000589532 IGKCP01834 107 aa14.67□□□□□ -0.06
LSM7-205ENST00000589532 S100A2P29034 98 aa14.67□□□□□ -0.06
LSM7-205ENST00000589532 A0A1W2PNN7 141 aa14.66□□□□□ -0.06
LSM7-205ENST00000589532 C20orf202A1L168 122 aa14.64□□□□□ -0.07
LSM7-205ENST00000589532 AKR1D1P51857 326 aa14.64□□□□□ -0.07
LSM7-205ENST00000589532 REG3GQ6UW15 175 aa14.64□□□□□ -0.07
LSM7-205ENST00000589532 KRTDAPP60985 99 aa14.62□□□□□ -0.07
LSM7-205ENST00000589532 PMCHL2Q9BQD1 86 aa14.62□□□□□ -0.07
LSM7-205ENST00000589532 GAGE2EQ4V326 116 aa14.61□□□□□ -0.07
LSM7-205ENST00000589532 GAGE2DQ9UEU5 116 aa14.61□□□□□ -0.07
LSM7-205ENST00000589532 C3orf79P0CE67 100 aa14.6□□□□□ -0.07
LSM7-205ENST00000589532 C9orf116Q5BN46 136 aaPredicted RBP14.6□□□□□ -0.07
LSM7-205ENST00000589532 LINC01545Q5VT33 79 aa14.6□□□□□ -0.07
LSM7-205ENST00000589532 PLEKHB2Q96CS7 222 aa14.6□□□□□ -0.07
LSM7-205ENST00000589532 HIST3H2BBQ8N257 126 aa14.58□□□□□ -0.08
LSM7-205ENST00000589532 PSORS1C2Q9UIG4 136 aa14.58□□□□□ -0.08
LSM7-205ENST00000589532 LEPROTO15243 131 aa14.57□□□□□ -0.08
LSM7-205ENST00000589532 COX17Q14061 63 aa14.57□□□□□ -0.08
LSM7-205ENST00000589532 HERV-K104P63124 156 aa14.56□□□□□ -0.08
LSM7-205ENST00000589532 LINC00587B1AMM8 73 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms