RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 IGLV5-39A0A0G2JS06 123 aa12.18□□□□□ -0.46
CLPTM1-209ENST00000588855 C6orf226Q5I0X4 101 aa12.18□□□□□ -0.46
CLPTM1-209ENST00000588855 Q6ZSA8 131 aa12.18□□□□□ -0.46
CLPTM1-209ENST00000588855 TMEM223A0PJW6 202 aa12.17□□□□□ -0.46
CLPTM1-209ENST00000588855 DPM2O94777 84 aa12.17□□□□□ -0.46
CLPTM1-209ENST00000588855 PLNP26678 52 aa12.17□□□□□ -0.46
CLPTM1-209ENST00000588855 C6orf48Q9UBA6 75 aa12.17□□□□□ -0.46
CLPTM1-209ENST00000588855 KRTDAPP60985 99 aa12.16□□□□□ -0.46
CLPTM1-209ENST00000588855 SNRPEP62304 92 aaKnown RBP12.16□□□□□ -0.46
CLPTM1-209ENST00000588855 IGKCP01834 107 aa12.16□□□□□ -0.46
CLPTM1-209ENST00000588855 S100A2P29034 98 aa12.16□□□□□ -0.46
CLPTM1-209ENST00000588855 CKS1BP61024 79 aa12.16□□□□□ -0.46
CLPTM1-209ENST00000588855 HAMPP81172 84 aa12.16□□□□□ -0.46
CLPTM1-209ENST00000588855 PET117Q6UWS5 81 aa12.16□□□□□ -0.46
CLPTM1-209ENST00000588855 HIST1H2BLQ99880 126 aa12.16□□□□□ -0.46
CLPTM1-209ENST00000588855 PANO1I0J062 215 aa12.15□□□□□ -0.46
CLPTM1-209ENST00000588855 RNF151Q2KHN1 245 aa12.15□□□□□ -0.46
CLPTM1-209ENST00000588855 LINC01545Q5VT33 79 aa12.15□□□□□ -0.46
CLPTM1-209ENST00000588855 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.15□□□□□ -0.46
CLPTM1-209ENST00000588855 CDK2AP2O75956 126 aa12.14□□□□□ -0.47
CLPTM1-209ENST00000588855 CHTF8P0CG12 524 aa12.14□□□□□ -0.47
CLPTM1-209ENST00000588855 C5orf52A6NGY3 159 aa12.13□□□□□ -0.47
CLPTM1-209ENST00000588855 CXCL5P42830 114 aa12.13□□□□□ -0.47
CLPTM1-209ENST00000588855 XGP55808 180 aa12.13□□□□□ -0.47
CLPTM1-209ENST00000588855 HERC2O95714 4834 aa12.13□□□□□ -0.47
CLPTM1-209ENST00000588855 A0A096LNI7 61 aa12.12□□□□□ -0.47
CLPTM1-209ENST00000588855 TRBV30A0A0K0K1B3 111 aa12.12□□□□□ -0.47
CLPTM1-209ENST00000588855 LOC107984640A0A0U1RRK4 108 aa12.12□□□□□ -0.47
CLPTM1-209ENST00000588855 IGKV2-24A0A0C4DH68 120 aa12.11□□□□□ -0.47
CLPTM1-209ENST00000588855 C9orf116Q5BN46 136 aaPredicted RBP12.11□□□□□ -0.47
CLPTM1-209ENST00000588855 PKIGQ9Y2B9 76 aa12.11□□□□□ -0.47
CLPTM1-209ENST00000588855 RPL18AQ02543 176 aaKnown RBP12.1□□□□□ -0.47
CLPTM1-209ENST00000588855 CIRBPQ14011 172 aaKnown RBP12.1□□□□□ -0.47
CLPTM1-209ENST00000588855 GAGE2BQ13066 116 aa12.09□□□□□ -0.47
CLPTM1-209ENST00000588855 SCXQ7RTU7 201 aa12.09□□□□□ -0.47
CLPTM1-209ENST00000588855 SPACA4Q8TDM5 124 aa12.09□□□□□ -0.47
CLPTM1-209ENST00000588855 TLX1NBP0CAT3 122 aa12.08□□□□□ -0.48
CLPTM1-209ENST00000588855 PTTG1IPP53801 180 aa12.08□□□□□ -0.48
CLPTM1-209ENST00000588855 C20orf202A1L168 122 aa12.07□□□□□ -0.48
CLPTM1-209ENST00000588855 Q6ZRP5 223 aa12.07□□□□□ -0.48
CLPTM1-209ENST00000588855 CIRBP-AS1Q8TBR5 109 aa12.07□□□□□ -0.48
CLPTM1-209ENST00000588855 TMA7Q9Y2S6 64 aaKnown RBP12.07□□□□□ -0.48
CLPTM1-209ENST00000588855 HERVK_113P61574 105 aa12.06□□□□□ -0.48
CLPTM1-209ENST00000588855 MAJINQ3KP22 176 aa12.06□□□□□ -0.48
CLPTM1-209ENST00000588855 TSPEAR-AS2P59090 65 aa12.06□□□□□ -0.48
CLPTM1-209ENST00000588855 ZNF625Q96I27 306 aaPredicted RBP12.06□□□□□ -0.48
CLPTM1-209ENST00000588855 NDUFC2-KCTD14E9PQ53 114 aa12.05□□□□□ -0.48
CLPTM1-209ENST00000588855 LEPROTO15243 131 aa12.05□□□□□ -0.48
CLPTM1-209ENST00000588855 DPH3Q96FX2 82 aa12.04□□□□□ -0.48
CLPTM1-209ENST00000588855 LINC00474Q9P2X8 69 aa12.04□□□□□ -0.48
CLPTM1-209ENST00000588855 FAT1Q14517 4588 aa12.04□□□□□ -0.48
CLPTM1-209ENST00000588855 A0A087WYN8 130 aa12.03□□□□□ -0.48
CLPTM1-209ENST00000588855 GAGE2EQ4V326 116 aa12.03□□□□□ -0.48
CLPTM1-209ENST00000588855 STPG4Q8N801 248 aa12.03□□□□□ -0.48
CLPTM1-209ENST00000588855 PLEKHB2Q96CS7 222 aa12.03□□□□□ -0.48
CLPTM1-209ENST00000588855 GAGE2DQ9UEU5 116 aa12.03□□□□□ -0.48
CLPTM1-209ENST00000588855 SFTA2Q6UW10 78 aa12.02□□□□□ -0.48
CLPTM1-209ENST00000588855 ATOH7Q8N100 152 aa12.02□□□□□ -0.48
CLPTM1-209ENST00000588855 E9PLD3 99 aa12.01□□□□□ -0.49
CLPTM1-209ENST00000588855 J3QQQ9 107 aa12.01□□□□□ -0.49
CLPTM1-209ENST00000588855 NDUFA12Q9UI09 145 aa12.01□□□□□ -0.49
CLPTM1-209ENST00000588855 SMR3BP02814 79 aaPredicted RBP12□□□□□ -0.49
CLPTM1-209ENST00000588855 KRTAP17-1Q9BYP8 105 aa12□□□□□ -0.49
CLPTM1-209ENST00000588855 PLAC8Q9NZF1 115 aa12□□□□□ -0.49
CLPTM1-209ENST00000588855 ERG28Q9UKR5 140 aa12□□□□□ -0.49
CLPTM1-209ENST00000588855 PFN2P35080 140 aa11.99□□□□□ -0.49
CLPTM1-209ENST00000588855 LGALS3P17931 250 aaKnown RBP11.98□□□□□ -0.49
CLPTM1-209ENST00000588855 C9orf129Q5T035 196 aaKnown RBP11.98□□□□□ -0.49
CLPTM1-209ENST00000588855 MYMXA0A1B0GTQ4 84 aa11.97□□□□□ -0.49
CLPTM1-209ENST00000588855 AKR1D1P51857 326 aa11.97□□□□□ -0.49
CLPTM1-209ENST00000588855 XAGE1AQ9HD64 81 aa11.97□□□□□ -0.49
CLPTM1-209ENST00000588855 VPS13BQ7Z7G8 4022 aa11.97□□□□□ -0.49
CLPTM1-209ENST00000588855 IGKV2D-26A0A0A0MRZ7 120 aa11.96□□□□□ -0.49
CLPTM1-209ENST00000588855 A0A1W2PNN7 141 aa11.96□□□□□ -0.49
CLPTM1-209ENST00000588855 FAM168BA1KXE4 195 aa11.96□□□□□ -0.5
CLPTM1-209ENST00000588855 HERV-K104P63124 156 aa11.96□□□□□ -0.5
CLPTM1-209ENST00000588855 ANKRD39Q53RE8 183 aa11.96□□□□□ -0.5
CLPTM1-209ENST00000588855 NMUP48645 174 aa11.95□□□□□ -0.5
CLPTM1-209ENST00000588855 A0A0U1RRA0 63 aa11.94□□□□□ -0.5
CLPTM1-209ENST00000588855 SCGB1D1O95968 90 aa11.94□□□□□ -0.5
CLPTM1-209ENST00000588855 COX17Q14061 63 aa11.94□□□□□ -0.5
CLPTM1-209ENST00000588855 MEIG1Q5JSS6 88 aa11.94□□□□□ -0.5
CLPTM1-209ENST00000588855 EPM2AB3EWF7 344 aa11.93□□□□□ -0.5
CLPTM1-209ENST00000588855 SMIM13P0DJ93 91 aa11.93□□□□□ -0.5
CLPTM1-209ENST00000588855 FAM19A5Q7Z5A7 132 aaPredicted RBP11.93□□□□□ -0.5
CLPTM1-209ENST00000588855 LINC00528Q8N1L1 170 aa11.93□□□□□ -0.5
CLPTM1-209ENST00000588855 Q8N1X5 172 aa11.93□□□□□ -0.5
CLPTM1-209ENST00000588855 LINC00158P58513 81 aa11.92□□□□□ -0.5
CLPTM1-209ENST00000588855 KRTAP7-1Q8IUC3 87 aa11.92□□□□□ -0.5
CLPTM1-209ENST00000588855 TTTY13Q9BZ97 58 aa11.92□□□□□ -0.5
CLPTM1-209ENST00000588855 SERTAD4-AS1Q5TG53 156 aa11.9□□□□□ -0.5
CLPTM1-209ENST00000588855 SND1-IT1Q9HBX3 110 aa11.9□□□□□ -0.5
CLPTM1-209ENST00000588855 Q5VSD8 79 aa11.89□□□□□ -0.51
CLPTM1-209ENST00000588855 ABCA13Q86UQ4 5058 aa11.89□□□□□ -0.51
CLPTM1-209ENST00000588855 A0A0J9YXY3 114 aa11.88□□□□□ -0.51
CLPTM1-209ENST00000588855 ZNF815PA8K554 130 aa11.88□□□□□ -0.51
CLPTM1-209ENST00000588855 PHF5AQ7RTV0 110 aaKnown RBP11.88□□□□□ -0.51
CLPTM1-209ENST00000588855 LINC00587B1AMM8 73 aa11.87□□□□□ -0.51
CLPTM1-209ENST00000588855 MIR7-3HGQ8N6C7 128 aa11.87□□□□□ -0.51
CLPTM1-209ENST00000588855 HSBP1L1C9JCN9 74 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms