RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 FA2HQ7L5A8 372 aa12.34□□□□□ -0.43
TRAPPC6A-203ENST00000587818 KRTAP11-1Q8IUC1 163 aa12.34□□□□□ -0.43
TRAPPC6A-203ENST00000587818 APOC3P02656 99 aa12.33□□□□□ -0.44
TRAPPC6A-203ENST00000587818 CKS1BP61024 79 aa12.33□□□□□ -0.44
TRAPPC6A-203ENST00000587818 C1orf137Q5JT78 98 aa12.33□□□□□ -0.44
TRAPPC6A-203ENST00000587818 KRTAP7-1Q8IUC3 87 aa12.33□□□□□ -0.44
TRAPPC6A-203ENST00000587818 LINC01600Q96MT4 127 aa12.33□□□□□ -0.44
TRAPPC6A-203ENST00000587818 SEC11AP67812 179 aa12.32□□□□□ -0.44
TRAPPC6A-203ENST00000587818 ODF1Q14990 250 aa12.32□□□□□ -0.44
TRAPPC6A-203ENST00000587818 SMCO4Q9NRQ5 59 aa12.32□□□□□ -0.44
TRAPPC6A-203ENST00000587818 C9orf129Q5T035 196 aaKnown RBP12.31□□□□□ -0.44
TRAPPC6A-203ENST00000587818 LINC00469Q8N7U9 141 aa12.31□□□□□ -0.44
TRAPPC6A-203ENST00000587818 PLA2G2DQ9UNK4 145 aa12.31□□□□□ -0.44
TRAPPC6A-203ENST00000587818 TRAPPC1Q9Y5R8 145 aa12.31□□□□□ -0.44
TRAPPC6A-203ENST00000587818 NDUFC2-KCTD14E9PQ53 114 aa12.3□□□□□ -0.44
TRAPPC6A-203ENST00000587818 Q8IZM0 81 aa12.3□□□□□ -0.44
TRAPPC6A-203ENST00000587818 CST9LQ9H4G1 147 aa12.3□□□□□ -0.44
TRAPPC6A-203ENST00000587818 REG3GQ6UW15 175 aa12.28□□□□□ -0.44
TRAPPC6A-203ENST00000587818 URB1-AS1Q96HZ7 61 aa12.28□□□□□ -0.44
TRAPPC6A-203ENST00000587818 TINCRA0A1B0GVN0 87 aa12.27□□□□□ -0.45
TRAPPC6A-203ENST00000587818 PMVKQ15126 192 aa12.26□□□□□ -0.45
TRAPPC6A-203ENST00000587818 C18orf32Q8TCD1 76 aa12.26□□□□□ -0.45
TRAPPC6A-203ENST00000587818 SMIM1B2RUZ4 78 aa12.25□□□□□ -0.45
TRAPPC6A-203ENST00000587818 M0QXV9 152 aa12.25□□□□□ -0.45
TRAPPC6A-203ENST00000587818 SPINK8P0C7L1 97 aa12.25□□□□□ -0.45
TRAPPC6A-203ENST00000587818 NDUFA6P56556 154 aa12.25□□□□□ -0.45
TRAPPC6A-203ENST00000587818 KRTAP10-8P60410 259 aa12.25□□□□□ -0.45
TRAPPC6A-203ENST00000587818 PMCHL1Q16048 86 aa12.25□□□□□ -0.45
TRAPPC6A-203ENST00000587818 XAGE1AQ9HD64 81 aa12.25□□□□□ -0.45
TRAPPC6A-203ENST00000587818 A0A096LNJ9 63 aa12.24□□□□□ -0.45
TRAPPC6A-203ENST00000587818 LINC01549A6NIU2 74 aa12.24□□□□□ -0.45
TRAPPC6A-203ENST00000587818 SNAPINO95295 136 aa12.24□□□□□ -0.45
TRAPPC6A-203ENST00000587818 IGLV7-43P04211 117 aa12.24□□□□□ -0.45
TRAPPC6A-203ENST00000587818 LINC00614P0C842 121 aa12.24□□□□□ -0.45
TRAPPC6A-203ENST00000587818 IGLV5-45A0A087WSX0 123 aa12.23□□□□□ -0.45
TRAPPC6A-203ENST00000587818 F8VRH5 84 aa12.23□□□□□ -0.45
TRAPPC6A-203ENST00000587818 UBE2BP63146 152 aa12.23□□□□□ -0.45
TRAPPC6A-203ENST00000587818 NDUFA5Q16718 116 aa12.23□□□□□ -0.45
TRAPPC6A-203ENST00000587818 PDZD11Q5EBL8 140 aa12.23□□□□□ -0.45
TRAPPC6A-203ENST00000587818 SVBPQ8N300 66 aa12.23□□□□□ -0.45
TRAPPC6A-203ENST00000587818 COX7B2Q8TF08 81 aa12.23□□□□□ -0.45
TRAPPC6A-203ENST00000587818 UBR4Q5T4S7 5183 aa12.2□□□□□ -0.46
TRAPPC6A-203ENST00000587818 RAB5BP61020 215 aa12.19□□□□□ -0.46
TRAPPC6A-203ENST00000587818 C22orf24Q9Y442 160 aa12.19□□□□□ -0.46
TRAPPC6A-203ENST00000587818 CXCL5P42830 114 aa12.18□□□□□ -0.46
TRAPPC6A-203ENST00000587818 HBDP02042 147 aa12.17□□□□□ -0.46
TRAPPC6A-203ENST00000587818 YPEL4Q96NS1 127 aa12.17□□□□□ -0.46
TRAPPC6A-203ENST00000587818 IGLC3P0DOY3 106 aa12.16□□□□□ -0.46
TRAPPC6A-203ENST00000587818 DIRC1Q969H9 104 aa12.16□□□□□ -0.46
TRAPPC6A-203ENST00000587818 H3BRM9 83 aa12.15□□□□□ -0.46
TRAPPC6A-203ENST00000587818 ZNF22P17026 224 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC6A-203ENST00000587818 BAGE3Q86Y29 109 aa12.14□□□□□ -0.47
TRAPPC6A-203ENST00000587818 H0Y9J4 135 aa12.12□□□□□ -0.47
TRAPPC6A-203ENST00000587818 PRR26Q8N8Z3 221 aa12.12□□□□□ -0.47
TRAPPC6A-203ENST00000587818 ATP5LO75964 103 aa12.11□□□□□ -0.47
TRAPPC6A-203ENST00000587818 LBHQ53QV2 105 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC6A-203ENST00000587818 CBLN2Q8IUK8 224 aa12.11□□□□□ -0.47
TRAPPC6A-203ENST00000587818 IGLV5-39A0A0G2JS06 123 aa12.1□□□□□ -0.47
TRAPPC6A-203ENST00000587818 C11orf86A6NJI1 115 aa12.1□□□□□ -0.47
TRAPPC6A-203ENST00000587818 PFN2P35080 140 aa12.1□□□□□ -0.47
TRAPPC6A-203ENST00000587818 GAGE10A6NGK3 116 aa12.09□□□□□ -0.47
TRAPPC6A-203ENST00000587818 MRPL55Q7Z7F7 128 aaKnown RBP12.09□□□□□ -0.47
TRAPPC6A-203ENST00000587818 LINC00167Q96N53 147 aa12.09□□□□□ -0.47
TRAPPC6A-203ENST00000587818 RPL37AP8A6NKH3 93 aa12.08□□□□□ -0.48
TRAPPC6A-203ENST00000587818 TMEM170BQ5T4T1 132 aa12.08□□□□□ -0.48
TRAPPC6A-203ENST00000587818 SLC7A5P1Q8MH63 180 aa12.08□□□□□ -0.48
TRAPPC6A-203ENST00000587818 ZNF625Q96I27 306 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC6A-203ENST00000587818 CHTOPQ9Y3Y2 248 aaKnown RBP12.07□□□□□ -0.48
TRAPPC6A-203ENST00000587818 TP73-AS1Q9UF72 201 aa12.06□□□□□ -0.48
TRAPPC6A-203ENST00000587818 ZNF861PO60384 105 aa12.05□□□□□ -0.48
TRAPPC6A-203ENST00000587818 SCO1O75880 301 aa12.05□□□□□ -0.48
TRAPPC6A-203ENST00000587818 KRTAP1-4P0C5Y4 121 aa12.05□□□□□ -0.48
TRAPPC6A-203ENST00000587818 FAM19A2Q8N3H0 131 aa12.05□□□□□ -0.48
TRAPPC6A-203ENST00000587818 CHCHD1Q96BP2 118 aaKnown RBP12.05□□□□□ -0.48
TRAPPC6A-203ENST00000587818 NUPR1O60356 82 aa12.04□□□□□ -0.48
TRAPPC6A-203ENST00000587818 IFI27L1Q96BM0 104 aa12.04□□□□□ -0.48
TRAPPC6A-203ENST00000587818 ERG28Q9UKR5 140 aa12.03□□□□□ -0.48
TRAPPC6A-203ENST00000587818 TRGC2P03986 189 aa12.02□□□□□ -0.49
TRAPPC6A-203ENST00000587818 NKAPP1Q8N9T2 125 aa12.01□□□□□ -0.49
TRAPPC6A-203ENST00000587818 SND1-IT1Q9HBX3 110 aa12.01□□□□□ -0.49
TRAPPC6A-203ENST00000587818 IGLV5-37A0A075B6J1 123 aa12□□□□□ -0.49
TRAPPC6A-203ENST00000587818 LRP2P98164 4655 aa12□□□□□ -0.49
TRAPPC6A-203ENST00000587818 TRAV12-1A0A0B4J245 112 aa11.99□□□□□ -0.49
TRAPPC6A-203ENST00000587818 BCE1O60756 84 aa11.99□□□□□ -0.49
TRAPPC6A-203ENST00000587818 HSBP1O75506 76 aa11.99□□□□□ -0.49
TRAPPC6A-203ENST00000587818 IGLV1-50A0A075B6I6 118 aa11.98□□□□□ -0.49
TRAPPC6A-203ENST00000587818 TMEM223A0PJW6 202 aa11.98□□□□□ -0.49
TRAPPC6A-203ENST00000587818 A0A0U1RRA0 63 aa11.97□□□□□ -0.49
TRAPPC6A-203ENST00000587818 IGKV2-28A0A075B6P5 120 aa11.96□□□□□ -0.49
TRAPPC6A-203ENST00000587818 H0Y8G0 127 aa11.96□□□□□ -0.49
TRAPPC6A-203ENST00000587818 IGKV2D-28P01615 120 aa11.96□□□□□ -0.49
TRAPPC6A-203ENST00000587818 VPREB1P12018 145 aa11.96□□□□□ -0.49
TRAPPC6A-203ENST00000587818 Q8NDZ9 215 aa11.96□□□□□ -0.49
TRAPPC6A-203ENST00000587818 RPL28P46779 137 aaKnown RBP11.95□□□□□ -0.5
TRAPPC6A-203ENST00000587818 LINC00158P58513 81 aa11.95□□□□□ -0.5
TRAPPC6A-203ENST00000587818 LINC00310P59036 64 aa11.95□□□□□ -0.5
TRAPPC6A-203ENST00000587818 COX17Q14061 63 aa11.95□□□□□ -0.5
TRAPPC6A-203ENST00000587818 SERF1AO75920 110 aa11.93□□□□□ -0.5
TRAPPC6A-203ENST00000587818 COLCA2A8K830 154 aa11.92□□□□□ -0.5
TRAPPC6A-203ENST00000587818 ANAPC11Q9NYG5 84 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms