RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 PMCHL1Q16048 86 aa8.36□□□□□ -1.07
SMARCA4-210ENST00000586892 TOMM7Q9P0U1 55 aa8.36□□□□□ -1.07
SMARCA4-210ENST00000586892 ATP5LO75964 103 aa8.35□□□□□ -1.07
SMARCA4-210ENST00000586892 CKS1BP61024 79 aa8.35□□□□□ -1.07
SMARCA4-210ENST00000586892 PDZD11Q5EBL8 140 aa8.35□□□□□ -1.07
SMARCA4-210ENST00000586892 C6orf226Q5I0X4 101 aa8.35□□□□□ -1.07
SMARCA4-210ENST00000586892 C2orf82Q6UX34 121 aa8.35□□□□□ -1.07
SMARCA4-210ENST00000586892 CHCHD1Q96BP2 118 aaKnown RBP8.35□□□□□ -1.07
SMARCA4-210ENST00000586892 SMIM1B2RUZ4 78 aa8.34□□□□□ -1.07
SMARCA4-210ENST00000586892 Q6ZRP5 223 aa8.34□□□□□ -1.07
SMARCA4-210ENST00000586892 NDUFC2-KCTD14E9PQ53 114 aa8.33□□□□□ -1.08
SMARCA4-210ENST00000586892 TRGC2P03986 189 aa8.33□□□□□ -1.08
SMARCA4-210ENST00000586892 CXCL5P42830 114 aa8.33□□□□□ -1.08
SMARCA4-210ENST00000586892 NDUFA6P56556 154 aa8.33□□□□□ -1.08
SMARCA4-210ENST00000586892 C9orf116Q5BN46 136 aaPredicted RBP8.33□□□□□ -1.08
SMARCA4-210ENST00000586892 HERC1Q15751 4861 aa8.32□□□□□ -1.08
SMARCA4-210ENST00000586892 A0A1W2PNN7 141 aa8.32□□□□□ -1.08
SMARCA4-210ENST00000586892 H3BRM9 83 aa8.32□□□□□ -1.08
SMARCA4-210ENST00000586892 IGLC3P0DOY3 106 aa8.32□□□□□ -1.08
SMARCA4-210ENST00000586892 LRP1Q07954 4544 aaKnown RBP8.32□□□□□ -1.08
SMARCA4-210ENST00000586892 F8VRH5 84 aa8.31□□□□□ -1.08
SMARCA4-210ENST00000586892 BAGE3Q86Y29 109 aa8.31□□□□□ -1.08
SMARCA4-210ENST00000586892 FAT3Q8TDW7 4589 aa8.3□□□□□ -1.08
SMARCA4-210ENST00000586892 COLCA2A8K830 154 aa8.3□□□□□ -1.08
SMARCA4-210ENST00000586892 KRTAP29-1A8MX34 341 aaPredicted RBP8.3□□□□□ -1.08
SMARCA4-210ENST00000586892 SPINK8P0C7L1 97 aa8.3□□□□□ -1.08
SMARCA4-210ENST00000586892 HNRNPA3P51991 378 aaKnown RBP8.3□□□□□ -1.08
SMARCA4-210ENST00000586892 PRR3P79522 188 aaKnown RBP8.3□□□□□ -1.08
SMARCA4-210ENST00000586892 GAGE2EQ4V326 116 aa8.3□□□□□ -1.08
SMARCA4-210ENST00000586892 COX7B2Q8TF08 81 aa8.3□□□□□ -1.08
SMARCA4-210ENST00000586892 GAGE2DQ9UEU5 116 aa8.3□□□□□ -1.08
SMARCA4-210ENST00000586892 HSBP1O75506 76 aa8.29□□□□□ -1.08
SMARCA4-210ENST00000586892 J3QL48 77 aa8.28□□□□□ -1.08
SMARCA4-210ENST00000586892 OXTP01178 125 aa8.28□□□□□ -1.08
SMARCA4-210ENST00000586892 ZNF22P17026 224 aaPredicted RBP8.28□□□□□ -1.08
SMARCA4-210ENST00000586892 IFI27L1Q96BM0 104 aa8.28□□□□□ -1.08
SMARCA4-210ENST00000586892 IGLV5-39A0A0G2JS06 123 aa8.27□□□□□ -1.09
SMARCA4-210ENST00000586892 SCO1O75880 301 aa8.27□□□□□ -1.09
SMARCA4-210ENST00000586892 TRAV12-1A0A0B4J245 112 aa8.26□□□□□ -1.09
SMARCA4-210ENST00000586892 FAM168BA1KXE4 195 aa8.26□□□□□ -1.09
SMARCA4-210ENST00000586892 PHF5AQ7RTV0 110 aaKnown RBP8.26□□□□□ -1.09
SMARCA4-210ENST00000586892 FAM19A5Q7Z5A7 132 aaPredicted RBP8.26□□□□□ -1.09
SMARCA4-210ENST00000586892 FAM19A2Q8N3H0 131 aa8.26□□□□□ -1.09
SMARCA4-210ENST00000586892 CHTOPQ9Y3Y2 248 aaKnown RBP8.26□□□□□ -1.09
SMARCA4-210ENST00000586892 C11orf86A6NJI1 115 aa8.25□□□□□ -1.09
SMARCA4-210ENST00000586892 SERF1AO75920 110 aa8.25□□□□□ -1.09
SMARCA4-210ENST00000586892 C9orf129Q5T035 196 aaKnown RBP8.25□□□□□ -1.09
SMARCA4-210ENST00000586892 TMEM170BQ5T4T1 132 aa8.25□□□□□ -1.09
SMARCA4-210ENST00000586892 M0QXV9 152 aa8.23□□□□□ -1.09
SMARCA4-210ENST00000586892 LEPROTL1O95214 131 aa8.23□□□□□ -1.09
SMARCA4-210ENST00000586892 LINC00310P59036 64 aa8.23□□□□□ -1.09
SMARCA4-210ENST00000586892 KRTAP7-1Q8IUC3 87 aa8.23□□□□□ -1.09
SMARCA4-210ENST00000586892 PSORS1C2Q9UIG4 136 aa8.23□□□□□ -1.09
SMARCA4-210ENST00000586892 SFTA2Q6UW10 78 aa8.22□□□□□ -1.09
SMARCA4-210ENST00000586892 XAGE1AQ9HD64 81 aa8.22□□□□□ -1.09
SMARCA4-210ENST00000586892 ODF1Q14990 250 aa8.21□□□□□ -1.1
SMARCA4-210ENST00000586892 SPINK6Q6UWN8 80 aa8.21□□□□□ -1.1
SMARCA4-210ENST00000586892 HSPB8Q9UJY1 196 aa8.21□□□□□ -1.1
SMARCA4-210ENST00000586892 TMEM223A0PJW6 202 aa8.19□□□□□ -1.1
SMARCA4-210ENST00000586892 NUPR1O60356 82 aa8.19□□□□□ -1.1
SMARCA4-210ENST00000586892 UBE2BP63146 152 aa8.19□□□□□ -1.1
SMARCA4-210ENST00000586892 SRSF9Q13242 221 aaKnown RBP eCLIP8.19□□□□□ -1.1
SMARCA4-210ENST00000586892 C1orf137Q5JT78 98 aa8.19□□□□□ -1.1
SMARCA4-210ENST00000586892 SERTAD4-AS1Q5TG53 156 aa8.19□□□□□ -1.1
SMARCA4-210ENST00000586892 H0Y8G0 127 aa8.18□□□□□ -1.1
SMARCA4-210ENST00000586892 COX17Q14061 63 aa8.18□□□□□ -1.1
SMARCA4-210ENST00000586892 TP73-AS1Q9UF72 201 aa8.18□□□□□ -1.1
SMARCA4-210ENST00000586892 C22orf24Q9Y442 160 aa8.18□□□□□ -1.1
SMARCA4-210ENST00000586892 HIST1H2BKO60814 126 aa8.17□□□□□ -1.1
SMARCA4-210ENST00000586892 HIST1H2BJP06899 126 aa8.17□□□□□ -1.1
SMARCA4-210ENST00000586892 FABP4P15090 132 aa8.17□□□□□ -1.1
SMARCA4-210ENST00000586892 HIST1H2BOP23527 126 aa8.17□□□□□ -1.1
SMARCA4-210ENST00000586892 HIST1H2BBP33778 126 aa8.17□□□□□ -1.1
SMARCA4-210ENST00000586892 PFN2P35080 140 aa8.17□□□□□ -1.1
SMARCA4-210ENST00000586892 HIST1H2BDP58876 126 aa8.17□□□□□ -1.1
SMARCA4-210ENST00000586892 HIST1H2BCP62807 126 aa8.17□□□□□ -1.1
SMARCA4-210ENST00000586892 HIST2H2BEQ16778 126 aa8.17□□□□□ -1.1
SMARCA4-210ENST00000586892 LBHQ53QV2 105 aaPredicted RBP8.17□□□□□ -1.1
SMARCA4-210ENST00000586892 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.17□□□□□ -1.1
SMARCA4-210ENST00000586892 KRTAP11-1Q8IUC1 163 aa8.17□□□□□ -1.1
SMARCA4-210ENST00000586892 HIST1H2BHQ93079 126 aa8.17□□□□□ -1.1
SMARCA4-210ENST00000586892 ZNF625Q96I27 306 aaPredicted RBP8.17□□□□□ -1.1
SMARCA4-210ENST00000586892 HIST1H2BNQ99877 126 aa8.17□□□□□ -1.1
SMARCA4-210ENST00000586892 HIST1H2BMQ99879 126 aa8.17□□□□□ -1.1
SMARCA4-210ENST00000586892 ERG28Q9UKR5 140 aa8.17□□□□□ -1.1
SMARCA4-210ENST00000586892 PLA2G2DQ9UNK4 145 aa8.17□□□□□ -1.1
SMARCA4-210ENST00000586892 PLNP26678 52 aa8.16□□□□□ -1.1
SMARCA4-210ENST00000586892 REG3GQ6UW15 175 aa8.16□□□□□ -1.1
SMARCA4-210ENST00000586892 TNXBP22105 4242 aa8.16□□□□□ -1.1
SMARCA4-210ENST00000586892 IGLV7-43P04211 117 aa8.15□□□□□ -1.1
SMARCA4-210ENST00000586892 MRPL55Q7Z7F7 128 aaKnown RBP8.15□□□□□ -1.1
SMARCA4-210ENST00000586892 IGLV5-37A0A075B6J1 123 aa8.14□□□□□ -1.11
SMARCA4-210ENST00000586892 LINC01600Q96MT4 127 aa8.14□□□□□ -1.11
SMARCA4-210ENST00000586892 MAP1LC3CQ9BXW4 147 aa8.14□□□□□ -1.11
SMARCA4-210ENST00000586892 DPM2O94777 84 aa8.13□□□□□ -1.11
SMARCA4-210ENST00000586892 MT1HL1P0DM35 61 aa8.13□□□□□ -1.11
SMARCA4-210ENST00000586892 SND1-IT1Q9HBX3 110 aa8.13□□□□□ -1.11
SMARCA4-210ENST00000586892 HERV-K104P63124 156 aa8.12□□□□□ -1.11
SMARCA4-210ENST00000586892 NKAPP1Q8N9T2 125 aa8.12□□□□□ -1.11
SMARCA4-210ENST00000586892 DIRC1Q969H9 104 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms