RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 ANKRD29Q8N6D5 301 aa8.72□□□□□ -1.01
SMARCA4-208ENST00000585799 SPAG11BQ08648 103 aa8.71□□□□□ -1.01
SMARCA4-208ENST00000585799 SIGMAR1Q99720 223 aa8.71□□□□□ -1.01
SMARCA4-208ENST00000585799 KPRPQ5T749 579 aaPredicted RBP8.71□□□□□ -1.02
SMARCA4-208ENST00000585799 Q6ZTC4 211 aa8.71□□□□□ -1.02
SMARCA4-208ENST00000585799 C11orf45Q8TAV5 145 aa8.71□□□□□ -1.02
SMARCA4-208ENST00000585799 A0A0J9YWU9 116 aa8.71□□□□□ -1.02
SMARCA4-208ENST00000585799 PPDPFLQ8WWR9 84 aa8.71□□□□□ -1.02
SMARCA4-208ENST00000585799 DEFB131BA0A096LNP1 70 aa8.7□□□□□ -1.02
SMARCA4-208ENST00000585799 H7C423 109 aa8.69□□□□□ -1.02
SMARCA4-208ENST00000585799 EIF4EBP3O60516 100 aaPredicted RBP8.69□□□□□ -1.02
SMARCA4-208ENST00000585799 C9orf116Q5BN46 136 aaPredicted RBP8.69□□□□□ -1.02
SMARCA4-208ENST00000585799 RNF183Q96D59 192 aa8.69□□□□□ -1.02
SMARCA4-208ENST00000585799 CSDC2Q9Y534 153 aaKnown RBP8.69□□□□□ -1.02
SMARCA4-208ENST00000585799 TENM1Q9UKZ4 2725 aa8.69□□□□□ -1.02
SMARCA4-208ENST00000585799 IL17DQ8TAD2 202 aa8.69□□□□□ -1.02
SMARCA4-208ENST00000585799 TRAV13-2A0A0B4J235 113 aa8.68□□□□□ -1.02
SMARCA4-208ENST00000585799 TRAV8-4A0A0B4J246 113 aa8.68□□□□□ -1.02
SMARCA4-208ENST00000585799 SVIPQ8NHG7 77 aa8.68□□□□□ -1.02
SMARCA4-208ENST00000585799 SPANXDQ9BXN6 97 aa8.68□□□□□ -1.02
SMARCA4-208ENST00000585799 SPANXCQ9NY87 97 aa8.68□□□□□ -1.02
SMARCA4-208ENST00000585799 NCR3O14931 201 aa8.67□□□□□ -1.02
SMARCA4-208ENST00000585799 TEN1Q86WV5 123 aa8.67□□□□□ -1.02
SMARCA4-208ENST00000585799 GAGE2EQ4V326 116 aa8.67□□□□□ -1.02
SMARCA4-208ENST00000585799 C1orf43Q9BWL3 253 aa8.67□□□□□ -1.02
SMARCA4-208ENST00000585799 GAGE2DQ9UEU5 116 aa8.67□□□□□ -1.02
SMARCA4-208ENST00000585799 VWFP04275 2813 aa8.67□□□□□ -1.02
SMARCA4-208ENST00000585799 FOXI1Q12951 378 aa8.67□□□□□ -1.02
SMARCA4-208ENST00000585799 PRR3P79522 188 aaKnown RBP8.66□□□□□ -1.02
SMARCA4-208ENST00000585799 FAM104AQ969W3 186 aa8.66□□□□□ -1.02
SMARCA4-208ENST00000585799 CAMK2N2Q96S95 79 aa8.66□□□□□ -1.02
SMARCA4-208ENST00000585799 XAGE1AQ9HD64 81 aa8.66□□□□□ -1.02
SMARCA4-208ENST00000585799 UBE2DNLQ8IWF7 75 aa8.66□□□□□ -1.02
SMARCA4-208ENST00000585799 SBSPONQ8IVN8 264 aa8.65□□□□□ -1.02
SMARCA4-208ENST00000585799 BAALC-AS2P0C853 105 aa8.65□□□□□ -1.03
SMARCA4-208ENST00000585799 CCL18P55774 89 aa8.65□□□□□ -1.03
SMARCA4-208ENST00000585799 Q8NAQ8 132 aa8.65□□□□□ -1.03
SMARCA4-208ENST00000585799 A0A087WZ39 114 aa8.64□□□□□ -1.03
SMARCA4-208ENST00000585799 IGHV3OR16-9A0A0B4J2B5 98 aa8.64□□□□□ -1.03
SMARCA4-208ENST00000585799 TEX49A0A1B0GTD5 131 aa8.64□□□□□ -1.03
SMARCA4-208ENST00000585799 LELP1Q5T871 98 aa8.64□□□□□ -1.03
SMARCA4-208ENST00000585799 IGLV5-39A0A0G2JS06 123 aa8.64□□□□□ -1.03
SMARCA4-208ENST00000585799 CD164L2Q6UWJ8 174 aa8.64□□□□□ -1.03
SMARCA4-208ENST00000585799 WFDC10BQ8IUB3 73 aa8.64□□□□□ -1.03
SMARCA4-208ENST00000585799 C6orf223Q8N319 242 aa8.64□□□□□ -1.03
SMARCA4-208ENST00000585799 SOSTDC1Q6X4U4 206 aa8.63□□□□□ -1.03
SMARCA4-208ENST00000585799 WFDC9Q8NEX5 89 aa8.63□□□□□ -1.03
SMARCA4-208ENST00000585799 LECT2O14960 151 aa8.63□□□□□ -1.03
SMARCA4-208ENST00000585799 TIMM17BO60830 172 aa8.63□□□□□ -1.03
SMARCA4-208ENST00000585799 UNQ6190/PRO20217Q6UXQ8 127 aa8.63□□□□□ -1.03
SMARCA4-208ENST00000585799 KRTAP10-11P60412 298 aa8.62□□□□□ -1.03
SMARCA4-208ENST00000585799 TRBV30A0A0K0K1B3 111 aa8.62□□□□□ -1.03
SMARCA4-208ENST00000585799 TRBV10-2A0A0K0K1G8 114 aa8.62□□□□□ -1.03
SMARCA4-208ENST00000585799 IBA57-AS1B1ANH7 110 aa8.62□□□□□ -1.03
SMARCA4-208ENST00000585799 GAGE2AQ6NT46 116 aa8.62□□□□□ -1.03
SMARCA4-208ENST00000585799 SLPIP03973 132 aa8.62□□□□□ -1.03
SMARCA4-208ENST00000585799 DPH3Q96FX2 82 aa8.62□□□□□ -1.03
SMARCA4-208ENST00000585799 IGLV5-45A0A087WSX0 123 aa8.61□□□□□ -1.03
SMARCA4-208ENST00000585799 LITAFQ99732 161 aa8.61□□□□□ -1.03
SMARCA4-208ENST00000585799 RPL18AQ02543 176 aaKnown RBP8.61□□□□□ -1.03
SMARCA4-208ENST00000585799 PSCAO43653 123 aa8.6□□□□□ -1.03
SMARCA4-208ENST00000585799 LYPD5Q6UWN5 251 aa8.59□□□□□ -1.03
SMARCA4-208ENST00000585799 A0A1B0GUV1 79 aa8.59□□□□□ -1.03
SMARCA4-208ENST00000585799 SMCPP49901 116 aaPredicted RBP8.59□□□□□ -1.03
SMARCA4-208ENST00000585799 C15orf53Q8NAA6 179 aa8.59□□□□□ -1.03
SMARCA4-208ENST00000585799 LAMTOR3Q9UHA4 124 aa8.58□□□□□ -1.04
SMARCA4-208ENST00000585799 TTC32Q5I0X7 151 aa8.58□□□□□ -1.04
SMARCA4-208ENST00000585799 SMIM11BQ8TCY0 68 aa8.58□□□□□ -1.04
SMARCA4-208ENST00000585799 SPATA25Q9BR10 227 aa8.57□□□□□ -1.04
SMARCA4-208ENST00000585799 Q8IZM0 81 aa8.57□□□□□ -1.04
SMARCA4-208ENST00000585799 LINC00337Q8N6G1 96 aa8.57□□□□□ -1.04
SMARCA4-208ENST00000585799 ZNF469Q96JG9 3925 aaPredicted RBP8.56□□□□□ -1.04
SMARCA4-208ENST00000585799 CXCL5P42830 114 aa8.56□□□□□ -1.04
SMARCA4-208ENST00000585799 LST1O00453 97 aa8.56□□□□□ -1.04
SMARCA4-208ENST00000585799 GAGE2BQ13066 116 aa8.55□□□□□ -1.04
SMARCA4-208ENST00000585799 PRO0461Q9UI25 63 aa8.55□□□□□ -1.04
SMARCA4-208ENST00000585799 H3BT86 120 aa8.54□□□□□ -1.04
SMARCA4-208ENST00000585799 ESRGQ1W209 222 aa8.54□□□□□ -1.04
SMARCA4-208ENST00000585799 C10orf25Q5T742 122 aa8.54□□□□□ -1.04
SMARCA4-208ENST00000585799 MT-ATP8P03928 68 aa8.53□□□□□ -1.04
SMARCA4-208ENST00000585799 C6orf99Q4VX62 202 aa8.53□□□□□ -1.04
SMARCA4-208ENST00000585799 NKAPP1Q8N9T2 125 aa8.53□□□□□ -1.04
SMARCA4-208ENST00000585799 TMEM126AQ9H061 195 aa8.53□□□□□ -1.04
SMARCA4-208ENST00000585799 LINC00612Q8N6U2 182 aa8.53□□□□□ -1.04
SMARCA4-208ENST00000585799 H0YGX0 51 aa8.52□□□□□ -1.04
SMARCA4-208ENST00000585799 TRAV10A0A0B4J240 114 aa8.51□□□□□ -1.05
SMARCA4-208ENST00000585799 C14orf132Q9NPU4 83 aa8.51□□□□□ -1.05
SMARCA4-208ENST00000585799 ORMDL1Q9P0S3 153 aa8.5□□□□□ -1.05
SMARCA4-208ENST00000585799 A0A087WYN8 130 aa8.49□□□□□ -1.05
SMARCA4-208ENST00000585799 DEFB105AQ8NG35 78 aa8.49□□□□□ -1.05
SMARCA4-208ENST00000585799 INAFM2P0DMQ5 153 aa8.49□□□□□ -1.05
SMARCA4-208ENST00000585799 ENHOQ6UWT2 76 aa8.48□□□□□ -1.05
SMARCA4-208ENST00000585799 ANAPC13Q9BS18 74 aa8.48□□□□□ -1.05
SMARCA4-208ENST00000585799 FAM218AQ96MZ4 157 aa8.48□□□□□ -1.05
SMARCA4-208ENST00000585799 FBN1P35555 2871 aaKnown RBP8.47□□□□□ -1.05
SMARCA4-208ENST00000585799 IGKV2-24A0A0C4DH68 120 aa8.47□□□□□ -1.05
SMARCA4-208ENST00000585799 XGP55808 180 aa8.47□□□□□ -1.05
SMARCA4-208ENST00000585799 IGKV2-28A0A075B6P5 120 aa8.47□□□□□ -1.05
SMARCA4-208ENST00000585799 IGKV2D-28P01615 120 aa8.47□□□□□ -1.05
SMARCA4-208ENST00000585799 SYCNQ0VAF6 134 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms