RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 CAMK2N2Q96S95 79 aa11.13□□□□□ -0.63
HMG20B-215ENST00000585741 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.12□□□□□ -0.63
HMG20B-215ENST00000585741 LRCOL1A6NCL2 159 aa11.12□□□□□ -0.63
HMG20B-215ENST00000585741 J3QQQ9 107 aa11.12□□□□□ -0.63
HMG20B-215ENST00000585741 NDUFA1O15239 70 aa11.12□□□□□ -0.63
HMG20B-215ENST00000585741 TNP2Q05952 138 aa11.12□□□□□ -0.63
HMG20B-215ENST00000585741 LINC00526Q96FQ7 95 aa11.12□□□□□ -0.63
HMG20B-215ENST00000585741 C2orf48Q96LS8 159 aa11.12□□□□□ -0.63
HMG20B-215ENST00000585741 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.11□□□□□ -0.63
HMG20B-215ENST00000585741 F8WDY8 70 aa11.11□□□□□ -0.63
HMG20B-215ENST00000585741 WFDC2Q14508 124 aa11.11□□□□□ -0.63
HMG20B-215ENST00000585741 SFTA2Q6UW10 78 aa11.11□□□□□ -0.63
HMG20B-215ENST00000585741 Q8N814 137 aa11.11□□□□□ -0.63
HMG20B-215ENST00000585741 KRTAP4-5Q9BYR2 181 aa11.11□□□□□ -0.63
HMG20B-215ENST00000585741 LRP1BQ9NZR2 4599 aa11.1□□□□□ -0.63
HMG20B-215ENST00000585741 MAJINQ3KP22 176 aa11.1□□□□□ -0.63
HMG20B-215ENST00000585741 PAM16Q9Y3D7 125 aa11.1□□□□□ -0.63
HMG20B-215ENST00000585741 MYMXA0A1B0GTQ4 84 aa11.09□□□□□ -0.63
HMG20B-215ENST00000585741 SMIM6P0DI80 62 aa11.09□□□□□ -0.63
HMG20B-215ENST00000585741 SYCNQ0VAF6 134 aa11.09□□□□□ -0.63
HMG20B-215ENST00000585741 SPATA45Q537H7 98 aa11.09□□□□□ -0.63
HMG20B-215ENST00000585741 ANKRD39Q53RE8 183 aa11.09□□□□□ -0.63
HMG20B-215ENST00000585741 NTN5Q8WTR8 489 aaPredicted RBP11.09□□□□□ -0.63
HMG20B-215ENST00000585741 NDUFA12Q9UI09 145 aa11.09□□□□□ -0.63
HMG20B-215ENST00000585741 KIAA0087Q14695 138 aa11.08□□□□□ -0.64
HMG20B-215ENST00000585741 CARD19Q96LW7 228 aa11.08□□□□□ -0.64
HMG20B-215ENST00000585741 C2orf82Q6UX34 121 aa11.07□□□□□ -0.64
HMG20B-215ENST00000585741 IGKV2D-26A0A0A0MRZ7 120 aa11.05□□□□□ -0.64
HMG20B-215ENST00000585741 ZNF815PA8K554 130 aa11.05□□□□□ -0.64
HMG20B-215ENST00000585741 TSPEAR-AS2P59090 65 aa11.05□□□□□ -0.64
HMG20B-215ENST00000585741 HERV-K104P63124 156 aa11.05□□□□□ -0.64
HMG20B-215ENST00000585741 UNQ6190/PRO20217Q6UXQ8 127 aa11.05□□□□□ -0.64
HMG20B-215ENST00000585741 IGLV5-52A0A0A0MRZ9 124 aa11.04□□□□□ -0.64
HMG20B-215ENST00000585741 TRBV30A0A0K0K1B3 111 aa11.04□□□□□ -0.64
HMG20B-215ENST00000585741 MEIG1Q5JSS6 88 aa11.04□□□□□ -0.64
HMG20B-215ENST00000585741 Q6ZRU5 148 aa11.04□□□□□ -0.64
HMG20B-215ENST00000585741 ZNF625Q96I27 306 aaPredicted RBP11.04□□□□□ -0.64
HMG20B-215ENST00000585741 LINC00587B1AMM8 73 aa11.03□□□□□ -0.64
HMG20B-215ENST00000585741 CNBPP62633 177 aaKnown RBP11.03□□□□□ -0.64
HMG20B-215ENST00000585741 CDPF1Q6NVV7 123 aa11.03□□□□□ -0.64
HMG20B-215ENST00000585741 SCGB1D4Q6XE38 83 aa11.03□□□□□ -0.64
HMG20B-215ENST00000585741 PKIGQ9Y2B9 76 aa11.03□□□□□ -0.64
HMG20B-215ENST00000585741 APOBP04114 4563 aaKnown RBP11.02□□□□□ -0.64
HMG20B-215ENST00000585741 DNAH5Q8TE73 4624 aa11.01□□□□□ -0.65
HMG20B-215ENST00000585741 CIRBPQ14011 172 aaKnown RBP11.01□□□□□ -0.65
HMG20B-215ENST00000585741 C10orf25Q5T742 122 aa11.01□□□□□ -0.65
HMG20B-215ENST00000585741 PCP2Q8IVA1 136 aa11.01□□□□□ -0.65
HMG20B-215ENST00000585741 PGPEP1Q9NXJ5 209 aa11.01□□□□□ -0.65
HMG20B-215ENST00000585741 RNF151Q2KHN1 245 aa11□□□□□ -0.65
HMG20B-215ENST00000585741 C12orf57Q99622 126 aa11□□□□□ -0.65
HMG20B-215ENST00000585741 TTTY13Q9BZ97 58 aa11□□□□□ -0.65
HMG20B-215ENST00000585741 C6orf48Q9UBA6 75 aa11□□□□□ -0.65
HMG20B-215ENST00000585741 SLPIP03973 132 aa10.99□□□□□ -0.65
HMG20B-215ENST00000585741 COX8AP10176 69 aa10.99□□□□□ -0.65
HMG20B-215ENST00000585741 PFN2P35080 140 aa10.99□□□□□ -0.65
HMG20B-215ENST00000585741 LINC00158P58513 81 aa10.99□□□□□ -0.65
HMG20B-215ENST00000585741 C14orf144Q96I85 54 aa10.99□□□□□ -0.65
HMG20B-215ENST00000585741 ERG28Q9UKR5 140 aa10.99□□□□□ -0.65
HMG20B-215ENST00000585741 RPL18AQ02543 176 aaKnown RBP10.98□□□□□ -0.65
HMG20B-215ENST00000585741 SLC25A34Q6PIV7 304 aa10.98□□□□□ -0.65
HMG20B-215ENST00000585741 A0A0U1RRA0 63 aa10.97□□□□□ -0.65
HMG20B-215ENST00000585741 LOC107984640A0A0U1RRK4 108 aa10.97□□□□□ -0.65
HMG20B-215ENST00000585741 COX17Q14061 63 aa10.97□□□□□ -0.65
HMG20B-215ENST00000585741 C9orf116Q5BN46 136 aaPredicted RBP10.97□□□□□ -0.65
HMG20B-215ENST00000585741 C9orf163Q8N9P6 203 aa10.97□□□□□ -0.65
HMG20B-215ENST00000585741 A0A0J9YXY3 114 aa10.96□□□□□ -0.65
HMG20B-215ENST00000585741 SMIM13P0DJ93 91 aa10.95□□□□□ -0.66
HMG20B-215ENST00000585741 FUSP35637 526 aaKnown RBP eCLIP10.95□□□□□ -0.66
HMG20B-215ENST00000585741 KRTAP10-2P60368 255 aa10.95□□□□□ -0.66
HMG20B-215ENST00000585741 BOD1L2Q8IYS8 172 aa10.95□□□□□ -0.66
HMG20B-215ENST00000585741 TMEM238C9JI98 176 aa10.94□□□□□ -0.66
HMG20B-215ENST00000585741 NDUFC2-KCTD14E9PQ53 114 aa10.94□□□□□ -0.66
HMG20B-215ENST00000585741 GAGE2BQ13066 116 aa10.94□□□□□ -0.66
HMG20B-215ENST00000585741 DLEU1O43261 78 aa10.93□□□□□ -0.66
HMG20B-215ENST00000585741 GCSHP23434 173 aa10.93□□□□□ -0.66
HMG20B-215ENST00000585741 GAGE2EQ4V326 116 aa10.93□□□□□ -0.66
HMG20B-215ENST00000585741 GAGE2DQ9UEU5 116 aa10.93□□□□□ -0.66
HMG20B-215ENST00000585741 LINC01620Q4KN68 170 aa10.92□□□□□ -0.66
HMG20B-215ENST00000585741 LINC00518Q8N0U6 118 aa10.92□□□□□ -0.66
HMG20B-215ENST00000585741 UQCR10Q9UDW1 63 aa10.92□□□□□ -0.66
HMG20B-215ENST00000585741 TSTD3H0UI37 97 aa10.91□□□□□ -0.66
HMG20B-215ENST00000585741 TIMM17BO60830 172 aa10.91□□□□□ -0.66
HMG20B-215ENST00000585741 CDK2AP2O75956 126 aa10.91□□□□□ -0.66
HMG20B-215ENST00000585741 TLX1NBP0CAT3 122 aa10.91□□□□□ -0.66
HMG20B-215ENST00000585741 DPH3Q96FX2 82 aa10.91□□□□□ -0.66
HMG20B-215ENST00000585741 MIEN1Q9BRT3 115 aa10.91□□□□□ -0.66
HMG20B-215ENST00000585741 PRO1933Q9H354 126 aa10.91□□□□□ -0.66
HMG20B-215ENST00000585741 IGKV2-24A0A0C4DH68 120 aa10.9□□□□□ -0.66
HMG20B-215ENST00000585741 SRSF9Q13242 221 aaKnown RBP eCLIP10.9□□□□□ -0.66
HMG20B-215ENST00000585741 MIR7-3HGQ8N6C7 128 aa10.9□□□□□ -0.66
HMG20B-215ENST00000585741 HERC1Q15751 4861 aa10.89□□□□□ -0.67
HMG20B-215ENST00000585741 C16orf90A8MZG2 172 aa10.89□□□□□ -0.67
HMG20B-215ENST00000585741 COPS9Q8WXC6 57 aa10.89□□□□□ -0.67
HMG20B-215ENST00000585741 LINC00474Q9P2X8 69 aa10.89□□□□□ -0.67
HMG20B-215ENST00000585741 SDIM1Q6ZPB5 146 aa10.88□□□□□ -0.67
HMG20B-215ENST00000585741 Q6ZRP5 223 aa10.88□□□□□ -0.67
HMG20B-215ENST00000585741 DAND5Q8N907 189 aa10.88□□□□□ -0.67
HMG20B-215ENST00000585741 PTTG1IPP53801 180 aa10.87□□□□□ -0.67
HMG20B-215ENST00000585741 XAGE1AQ9HD64 81 aa10.87□□□□□ -0.67
HMG20B-215ENST00000585741 TP73-AS1Q9UF72 201 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms