RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 Q6ZRP5 223 aa17■□□□□ 0.31
SMARCD2-210ENST00000584400 IGLV5-45A0A087WSX0 123 aa16.99■□□□□ 0.31
SMARCD2-210ENST00000584400 CXCL5P42830 114 aa16.99■□□□□ 0.31
SMARCD2-210ENST00000584400 SLC7A5P1Q8MH63 180 aa16.99■□□□□ 0.31
SMARCD2-210ENST00000584400 A0A096LNJ9 63 aa16.98■□□□□ 0.31
SMARCD2-210ENST00000584400 NDUFC2-KCTD14E9PQ53 114 aa16.98■□□□□ 0.31
SMARCD2-210ENST00000584400 ATP5LO75964 103 aa16.98■□□□□ 0.31
SMARCD2-210ENST00000584400 HNRNPA3P51991 378 aaKnown RBP16.98■□□□□ 0.31
SMARCD2-210ENST00000584400 PRR3P79522 188 aaKnown RBP16.98■□□□□ 0.31
SMARCD2-210ENST00000584400 PDZD11Q5EBL8 140 aa16.98■□□□□ 0.31
SMARCD2-210ENST00000584400 CBLN2Q8IUK8 224 aa16.98■□□□□ 0.31
SMARCD2-210ENST00000584400 H3BRM9 83 aa16.97■□□□□ 0.31
SMARCD2-210ENST00000584400 NDUFA6P56556 154 aa16.97■□□□□ 0.31
SMARCD2-210ENST00000584400 GAGE2EQ4V326 116 aa16.97■□□□□ 0.31
SMARCD2-210ENST00000584400 GAGE2DQ9UEU5 116 aa16.97■□□□□ 0.31
SMARCD2-210ENST00000584400 CHCHD1Q96BP2 118 aaKnown RBP16.96■□□□□ 0.31
SMARCD2-210ENST00000584400 SMIM1B2RUZ4 78 aa16.95■□□□□ 0.3
SMARCD2-210ENST00000584400 MYCBP2O75592 4640 aa16.94■□□□□ 0.3
SMARCD2-210ENST00000584400 F8VRH5 84 aa16.94■□□□□ 0.3
SMARCD2-210ENST00000584400 PMCHL1Q16048 86 aa16.94■□□□□ 0.3
SMARCD2-210ENST00000584400 IGLC3P0DOY3 106 aa16.92■□□□□ 0.3
SMARCD2-210ENST00000584400 COX7B2Q8TF08 81 aa16.92■□□□□ 0.3
SMARCD2-210ENST00000584400 DMBT1Q9UGM3 2413 aaPredicted RBP16.9■□□□□ 0.3
SMARCD2-210ENST00000584400 SPINK8P0C7L1 97 aa16.89■□□□□ 0.29
SMARCD2-210ENST00000584400 BAGE3Q86Y29 109 aa16.88■□□□□ 0.29
SMARCD2-210ENST00000584400 PHF5AQ7RTV0 110 aaKnown RBP16.87■□□□□ 0.29
SMARCD2-210ENST00000584400 HSBP1O75506 76 aa16.86■□□□□ 0.29
SMARCD2-210ENST00000584400 TRGC2P03986 189 aa16.86■□□□□ 0.29
SMARCD2-210ENST00000584400 FAM19A5Q7Z5A7 132 aaPredicted RBP16.86■□□□□ 0.29
SMARCD2-210ENST00000584400 FAM168BA1KXE4 195 aa16.85■□□□□ 0.29
SMARCD2-210ENST00000584400 SPINK6Q6UWN8 80 aa16.85■□□□□ 0.29
SMARCD2-210ENST00000584400 C9orf129Q5T035 196 aaKnown RBP16.83■□□□□ 0.28
SMARCD2-210ENST00000584400 ZNF22P17026 224 aaPredicted RBP16.82■□□□□ 0.28
SMARCD2-210ENST00000584400 PSORS1C2Q9UIG4 136 aa16.82■□□□□ 0.28
SMARCD2-210ENST00000584400 M0QXV9 152 aa16.81■□□□□ 0.28
SMARCD2-210ENST00000584400 IFI27L1Q96BM0 104 aa16.81■□□□□ 0.28
SMARCD2-210ENST00000584400 CHTOPQ9Y3Y2 248 aaKnown RBP16.81■□□□□ 0.28
SMARCD2-210ENST00000584400 TRAV12-1A0A0B4J245 112 aa16.79■□□□□ 0.28
SMARCD2-210ENST00000584400 IGLV5-39A0A0G2JS06 123 aa16.79■□□□□ 0.28
SMARCD2-210ENST00000584400 TMEM170BQ5T4T1 132 aa16.79■□□□□ 0.28
SMARCD2-210ENST00000584400 C1orf137Q5JT78 98 aa16.78■□□□□ 0.28
SMARCD2-210ENST00000584400 COLCA2A8K830 154 aa16.77■□□□□ 0.28
SMARCD2-210ENST00000584400 UBE2BP63146 152 aa16.77■□□□□ 0.28
SMARCD2-210ENST00000584400 SRSF9Q13242 221 aaKnown RBP eCLIP16.77■□□□□ 0.28
SMARCD2-210ENST00000584400 REG3GQ6UW15 175 aa16.77■□□□□ 0.28
SMARCD2-210ENST00000584400 XAGE1AQ9HD64 81 aa16.77■□□□□ 0.28
SMARCD2-210ENST00000584400 C11orf86A6NJI1 115 aa16.76■□□□□ 0.27
SMARCD2-210ENST00000584400 SFTA2Q6UW10 78 aa16.76■□□□□ 0.27
SMARCD2-210ENST00000584400 KRTAP7-1Q8IUC3 87 aa16.75■□□□□ 0.27
SMARCD2-210ENST00000584400 ODF1Q14990 250 aa16.74■□□□□ 0.27
SMARCD2-210ENST00000584400 FAM19A2Q8N3H0 131 aa16.74■□□□□ 0.27
SMARCD2-210ENST00000584400 LBHQ53QV2 105 aaPredicted RBP16.73■□□□□ 0.27
SMARCD2-210ENST00000584400 SERF1AO75920 110 aa16.71■□□□□ 0.27
SMARCD2-210ENST00000584400 LEPROTL1O95214 131 aa16.71■□□□□ 0.27
SMARCD2-210ENST00000584400 C22orf24Q9Y442 160 aa16.71■□□□□ 0.27
SMARCD2-210ENST00000584400 SERTAD4-AS1Q5TG53 156 aa16.7■□□□□ 0.26
SMARCD2-210ENST00000584400 PKHD1L1Q86WI1 4243 aa16.69■□□□□ 0.26
SMARCD2-210ENST00000584400 HERC1Q15751 4861 aa16.69■□□□□ 0.26
SMARCD2-210ENST00000584400 LRP1Q07954 4544 aaKnown RBP16.69■□□□□ 0.26
SMARCD2-210ENST00000584400 TP73-AS1Q9UF72 201 aa16.69■□□□□ 0.26
SMARCD2-210ENST00000584400 IGLV7-43P04211 117 aa16.68■□□□□ 0.26
SMARCD2-210ENST00000584400 LINC01600Q96MT4 127 aa16.68■□□□□ 0.26
SMARCD2-210ENST00000584400 COX17Q14061 63 aa16.67■□□□□ 0.26
SMARCD2-210ENST00000584400 HSPB8Q9UJY1 196 aa16.67■□□□□ 0.26
SMARCD2-210ENST00000584400 PLA2G2DQ9UNK4 145 aa16.67■□□□□ 0.26
SMARCD2-210ENST00000584400 TMEM223A0PJW6 202 aa16.65■□□□□ 0.26
SMARCD2-210ENST00000584400 PFN2P35080 140 aa16.65■□□□□ 0.26
SMARCD2-210ENST00000584400 MRPL55Q7Z7F7 128 aaKnown RBP16.65■□□□□ 0.26
SMARCD2-210ENST00000584400 ERG28Q9UKR5 140 aa16.65■□□□□ 0.26
SMARCD2-210ENST00000584400 FAT3Q8TDW7 4589 aa16.64■□□□□ 0.25
SMARCD2-210ENST00000584400 MT1HL1P0DM35 61 aa16.64■□□□□ 0.25
SMARCD2-210ENST00000584400 KRTAP11-1Q8IUC1 163 aa16.64■□□□□ 0.25
SMARCD2-210ENST00000584400 DIRC1Q969H9 104 aa16.64■□□□□ 0.25
SMARCD2-210ENST00000584400 LINC00310P59036 64 aa16.63■□□□□ 0.25
SMARCD2-210ENST00000584400 H0Y8G0 127 aa16.62■□□□□ 0.25
SMARCD2-210ENST00000584400 NUPR1O60356 82 aa16.62■□□□□ 0.25
SMARCD2-210ENST00000584400 NKAPP1Q8N9T2 125 aa16.6■□□□□ 0.25
SMARCD2-210ENST00000584400 ZNF625Q96I27 306 aaPredicted RBP16.6■□□□□ 0.25
SMARCD2-210ENST00000584400 IGLV5-37A0A075B6J1 123 aa16.58■□□□□ 0.24
SMARCD2-210ENST00000584400 SCO1O75880 301 aa16.58■□□□□ 0.24
SMARCD2-210ENST00000584400 FABP4P15090 132 aa16.58■□□□□ 0.24
SMARCD2-210ENST00000584400 PLNP26678 52 aa16.57■□□□□ 0.24
SMARCD2-210ENST00000584400 SND1-IT1Q9HBX3 110 aa16.56■□□□□ 0.24
SMARCD2-210ENST00000584400 RPL24P83731 157 aaKnown RBP16.55■□□□□ 0.24
SMARCD2-210ENST00000584400 H0Y9J4 135 aa16.54■□□□□ 0.24
SMARCD2-210ENST00000584400 LINC00167Q96N53 147 aa16.54■□□□□ 0.24
SMARCD2-210ENST00000584400 MAP1LC3CQ9BXW4 147 aa16.54■□□□□ 0.24
SMARCD2-210ENST00000584400 LINC00587B1AMM8 73 aa16.53■□□□□ 0.24
SMARCD2-210ENST00000584400 LINC00158P58513 81 aa16.53■□□□□ 0.24
SMARCD2-210ENST00000584400 HERV-K104P63124 156 aa16.53■□□□□ 0.24
SMARCD2-210ENST00000584400 HIST1H2BKO60814 126 aa16.52■□□□□ 0.24
SMARCD2-210ENST00000584400 HIST1H2BJP06899 126 aa16.52■□□□□ 0.24
SMARCD2-210ENST00000584400 HIST1H2BOP23527 126 aa16.52■□□□□ 0.24
SMARCD2-210ENST00000584400 HIST1H2BBP33778 126 aa16.52■□□□□ 0.24
SMARCD2-210ENST00000584400 HIST1H2BDP58876 126 aa16.52■□□□□ 0.24
SMARCD2-210ENST00000584400 HIST1H2BCP62807 126 aa16.52■□□□□ 0.24
SMARCD2-210ENST00000584400 HIST2H2BEQ16778 126 aa16.52■□□□□ 0.24
SMARCD2-210ENST00000584400 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.52■□□□□ 0.24
SMARCD2-210ENST00000584400 HIST1H2BHQ93079 126 aa16.52■□□□□ 0.24
SMARCD2-210ENST00000584400 HIST1H2BNQ99877 126 aa16.52■□□□□ 0.24
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