RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 FABP9Q0Z7S8 132 aa13.19□□□□□ -0.3
PPP4R1-228ENST00000584074 COX19Q49B96 90 aa13.19□□□□□ -0.3
PPP4R1-228ENST00000584074 GEMIN7Q9H840 131 aaKnown RBP13.19□□□□□ -0.3
PPP4R1-228ENST00000584074 CKS1BP61024 79 aa13.18□□□□□ -0.3
PPP4R1-228ENST00000584074 C6orf226Q5I0X4 101 aa13.18□□□□□ -0.3
PPP4R1-228ENST00000584074 REG3GQ6UW15 175 aa13.18□□□□□ -0.3
PPP4R1-228ENST00000584074 KRTAP7-1Q8IUC3 87 aa13.18□□□□□ -0.3
PPP4R1-228ENST00000584074 C1orf137Q5JT78 98 aa13.17□□□□□ -0.3
PPP4R1-228ENST00000584074 KRTAP11-1Q8IUC1 163 aa13.17□□□□□ -0.3
PPP4R1-228ENST00000584074 Q8IZM0 81 aa13.17□□□□□ -0.3
PPP4R1-228ENST00000584074 C9orf129Q5T035 196 aaKnown RBP13.15□□□□□ -0.3
PPP4R1-228ENST00000584074 FA2HQ7L5A8 372 aa13.15□□□□□ -0.3
PPP4R1-228ENST00000584074 ODF1Q14990 250 aa13.14□□□□□ -0.31
PPP4R1-228ENST00000584074 LINC00469Q8N7U9 141 aa13.14□□□□□ -0.31
PPP4R1-228ENST00000584074 CST9LQ9H4G1 147 aa13.14□□□□□ -0.31
PPP4R1-228ENST00000584074 SMCO4Q9NRQ5 59 aa13.14□□□□□ -0.31
PPP4R1-228ENST00000584074 LINC01549A6NIU2 74 aa13.13□□□□□ -0.31
PPP4R1-228ENST00000584074 UBR4Q5T4S7 5183 aa13.12□□□□□ -0.31
PPP4R1-228ENST00000584074 TINCRA0A1B0GVN0 87 aa13.12□□□□□ -0.31
PPP4R1-228ENST00000584074 M0QXV9 152 aa13.12□□□□□ -0.31
PPP4R1-228ENST00000584074 KRTAP10-8P60410 259 aa13.12□□□□□ -0.31
PPP4R1-228ENST00000584074 SMIM1B2RUZ4 78 aa13.11□□□□□ -0.31
PPP4R1-228ENST00000584074 F8VRH5 84 aa13.1□□□□□ -0.31
PPP4R1-228ENST00000584074 APOC3P02656 99 aa13.1□□□□□ -0.31
PPP4R1-228ENST00000584074 IGLV7-43P04211 117 aa13.1□□□□□ -0.31
PPP4R1-228ENST00000584074 PMVKQ15126 192 aa13.1□□□□□ -0.31
PPP4R1-228ENST00000584074 IGLV5-45A0A087WSX0 123 aa13.09□□□□□ -0.31
PPP4R1-228ENST00000584074 TRAPPC1Q9Y5R8 145 aa13.09□□□□□ -0.31
PPP4R1-228ENST00000584074 XAGE1AQ9HD64 81 aa13.08□□□□□ -0.32
PPP4R1-228ENST00000584074 UBE2BP63146 152 aa13.07□□□□□ -0.32
PPP4R1-228ENST00000584074 PDZD11Q5EBL8 140 aa13.07□□□□□ -0.32
PPP4R1-228ENST00000584074 C18orf32Q8TCD1 76 aa13.07□□□□□ -0.32
PPP4R1-228ENST00000584074 URB1-AS1Q96HZ7 61 aa13.07□□□□□ -0.32
PPP4R1-228ENST00000584074 A0A096LNJ9 63 aa13.06□□□□□ -0.32
PPP4R1-228ENST00000584074 SPINK8P0C7L1 97 aa13.06□□□□□ -0.32
PPP4R1-228ENST00000584074 COX7B2Q8TF08 81 aa13.06□□□□□ -0.32
PPP4R1-228ENST00000584074 SNAPINO95295 136 aa13.05□□□□□ -0.32
PPP4R1-228ENST00000584074 CXCL5P42830 114 aa13.05□□□□□ -0.32
PPP4R1-228ENST00000584074 LINC00614P0C842 121 aa13.04□□□□□ -0.32
PPP4R1-228ENST00000584074 NDUFA5Q16718 116 aa13.04□□□□□ -0.32
PPP4R1-228ENST00000584074 SVBPQ8N300 66 aa13.04□□□□□ -0.32
PPP4R1-228ENST00000584074 DIRC1Q969H9 104 aa13.04□□□□□ -0.32
PPP4R1-228ENST00000584074 PMCHL1Q16048 86 aa13.03□□□□□ -0.32
PPP4R1-228ENST00000584074 C22orf24Q9Y442 160 aa13.03□□□□□ -0.32
PPP4R1-228ENST00000584074 NDUFA6P56556 154 aa13.02□□□□□ -0.33
PPP4R1-228ENST00000584074 H0Y9J4 135 aa13□□□□□ -0.33
PPP4R1-228ENST00000584074 H3BRM9 83 aa13□□□□□ -0.33
PPP4R1-228ENST00000584074 HBDP02042 147 aa13□□□□□ -0.33
PPP4R1-228ENST00000584074 IGLC3P0DOY3 106 aa13□□□□□ -0.33
PPP4R1-228ENST00000584074 RAB5BP61020 215 aa12.98□□□□□ -0.33
PPP4R1-228ENST00000584074 LBHQ53QV2 105 aaPredicted RBP12.97□□□□□ -0.33
PPP4R1-228ENST00000584074 YPEL4Q96NS1 127 aa12.97□□□□□ -0.33
PPP4R1-228ENST00000584074 ZNF22P17026 224 aaPredicted RBP12.96□□□□□ -0.33
PPP4R1-228ENST00000584074 PRR26Q8N8Z3 221 aa12.96□□□□□ -0.33
PPP4R1-228ENST00000584074 IGLV5-39A0A0G2JS06 123 aa12.95□□□□□ -0.34
PPP4R1-228ENST00000584074 MRPL55Q7Z7F7 128 aaKnown RBP12.95□□□□□ -0.34
PPP4R1-228ENST00000584074 ATP5LO75964 103 aa12.94□□□□□ -0.34
PPP4R1-228ENST00000584074 TP73-AS1Q9UF72 201 aa12.94□□□□□ -0.34
PPP4R1-228ENST00000584074 BAGE3Q86Y29 109 aa12.93□□□□□ -0.34
PPP4R1-228ENST00000584074 LRP2P98164 4655 aa12.92□□□□□ -0.34
PPP4R1-228ENST00000584074 KRTAP1-4P0C5Y4 121 aa12.92□□□□□ -0.34
PPP4R1-228ENST00000584074 C11orf86A6NJI1 115 aa12.91□□□□□ -0.34
PPP4R1-228ENST00000584074 NUPR1O60356 82 aa12.91□□□□□ -0.34
PPP4R1-228ENST00000584074 ZNF861PO60384 105 aa12.9□□□□□ -0.34
PPP4R1-228ENST00000584074 PFN2P35080 140 aa12.9□□□□□ -0.34
PPP4R1-228ENST00000584074 LINC00167Q96N53 147 aa12.9□□□□□ -0.34
PPP4R1-228ENST00000584074 RPL37AP8A6NKH3 93 aa12.89□□□□□ -0.35
PPP4R1-228ENST00000584074 GAGE10A6NGK3 116 aa12.88□□□□□ -0.35
PPP4R1-228ENST00000584074 TMEM170BQ5T4T1 132 aa12.88□□□□□ -0.35
PPP4R1-228ENST00000584074 CBLN2Q8IUK8 224 aa12.88□□□□□ -0.35
PPP4R1-228ENST00000584074 CHCHD1Q96BP2 118 aaKnown RBP12.87□□□□□ -0.35
PPP4R1-228ENST00000584074 CHTOPQ9Y3Y2 248 aaKnown RBP12.87□□□□□ -0.35
PPP4R1-228ENST00000584074 IGLV1-50A0A075B6I6 118 aa12.86□□□□□ -0.35
PPP4R1-228ENST00000584074 IGLV5-37A0A075B6J1 123 aa12.86□□□□□ -0.35
PPP4R1-228ENST00000584074 BCE1O60756 84 aa12.86□□□□□ -0.35
PPP4R1-228ENST00000584074 NKAPP1Q8N9T2 125 aa12.85□□□□□ -0.35
PPP4R1-228ENST00000584074 ZNF625Q96I27 306 aaPredicted RBP12.85□□□□□ -0.35
PPP4R1-228ENST00000584074 ERG28Q9UKR5 140 aa12.85□□□□□ -0.35
PPP4R1-228ENST00000584074 SCO1O75880 301 aa12.84□□□□□ -0.35
PPP4R1-228ENST00000584074 IFI27L1Q96BM0 104 aa12.83□□□□□ -0.36
PPP4R1-228ENST00000584074 SND1-IT1Q9HBX3 110 aa12.83□□□□□ -0.36
PPP4R1-228ENST00000584074 TRAV12-1A0A0B4J245 112 aa12.81□□□□□ -0.36
PPP4R1-228ENST00000584074 RPL28P46779 137 aaKnown RBP12.81□□□□□ -0.36
PPP4R1-228ENST00000584074 COX17Q14061 63 aa12.81□□□□□ -0.36
PPP4R1-228ENST00000584074 FAM19A2Q8N3H0 131 aa12.81□□□□□ -0.36
PPP4R1-228ENST00000584074 HSBP1O75506 76 aa12.79□□□□□ -0.36
PPP4R1-228ENST00000584074 TRGC2P03986 189 aa12.79□□□□□ -0.36
PPP4R1-228ENST00000584074 SLC7A5P1Q8MH63 180 aa12.79□□□□□ -0.36
PPP4R1-228ENST00000584074 IGKV2-28A0A075B6P5 120 aa12.78□□□□□ -0.36
PPP4R1-228ENST00000584074 TMEM223A0PJW6 202 aa12.78□□□□□ -0.36
PPP4R1-228ENST00000584074 IGKV2D-28P01615 120 aa12.78□□□□□ -0.36
PPP4R1-228ENST00000584074 VPREB1P12018 145 aa12.78□□□□□ -0.36
PPP4R1-228ENST00000584074 RPL13AP40429 203 aaKnown RBP12.78□□□□□ -0.36
PPP4R1-228ENST00000584074 SFTA2Q6UW10 78 aa12.78□□□□□ -0.36
PPP4R1-228ENST00000584074 RNF213Q63HN8 5207 aa12.77□□□□□ -0.37
PPP4R1-228ENST00000584074 Q8NDZ9 215 aa12.76□□□□□ -0.37
PPP4R1-228ENST00000584074 KRTAP13-1Q8IUC0 172 aa12.75□□□□□ -0.37
PPP4R1-228ENST00000584074 UBE2AP49459 152 aa12.74□□□□□ -0.37
PPP4R1-228ENST00000584074 LINC00158P58513 81 aa12.74□□□□□ -0.37
PPP4R1-228ENST00000584074 RPL24P83731 157 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms