RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 PMVKQ15126 192 aa7.96□□□□□ -1.14
SMARCE1-218ENST00000582955 RNF151Q2KHN1 245 aa7.96□□□□□ -1.14
SMARCE1-218ENST00000582955 C10orf25Q5T742 122 aa7.96□□□□□ -1.14
SMARCE1-218ENST00000582955 LINC00469Q8N7U9 141 aa7.96□□□□□ -1.14
SMARCE1-218ENST00000582955 C7orf33Q8WU49 177 aa7.96□□□□□ -1.14
SMARCE1-218ENST00000582955 CST9LQ9H4G1 147 aa7.96□□□□□ -1.14
SMARCE1-218ENST00000582955 TINCRA0A1B0GVN0 87 aa7.95□□□□□ -1.14
SMARCE1-218ENST00000582955 NDUFA6P56556 154 aa7.95□□□□□ -1.14
SMARCE1-218ENST00000582955 KRTAP10-4P60372 401 aaPredicted RBP7.95□□□□□ -1.14
SMARCE1-218ENST00000582955 C2orf82Q6UX34 121 aa7.95□□□□□ -1.14
SMARCE1-218ENST00000582955 C6orf48Q9UBA6 75 aa7.95□□□□□ -1.14
SMARCE1-218ENST00000582955 CKS1BP61024 79 aa7.94□□□□□ -1.14
SMARCE1-218ENST00000582955 C4orf48Q5BLP8 95 aa7.94□□□□□ -1.14
SMARCE1-218ENST00000582955 C6orf226Q5I0X4 101 aa7.94□□□□□ -1.14
SMARCE1-218ENST00000582955 FLG2Q5D862 2391 aaPredicted RBP7.94□□□□□ -1.14
SMARCE1-218ENST00000582955 Q8IZM0 81 aa7.93□□□□□ -1.14
SMARCE1-218ENST00000582955 TRBV30A0A0K0K1B3 111 aa7.92□□□□□ -1.14
SMARCE1-218ENST00000582955 ATP5LO75964 103 aa7.92□□□□□ -1.14
SMARCE1-218ENST00000582955 TRGC2P03986 189 aa7.92□□□□□ -1.14
SMARCE1-218ENST00000582955 PDZD11Q5EBL8 140 aa7.92□□□□□ -1.14
SMARCE1-218ENST00000582955 CHCHD1Q96BP2 118 aaKnown RBP7.92□□□□□ -1.14
SMARCE1-218ENST00000582955 IGLV5-45A0A087WSX0 123 aa7.91□□□□□ -1.14
SMARCE1-218ENST00000582955 SMIM1B2RUZ4 78 aa7.91□□□□□ -1.14
SMARCE1-218ENST00000582955 TLX1NBP0CAT3 122 aa7.91□□□□□ -1.14
SMARCE1-218ENST00000582955 GAGE2EQ4V326 116 aa7.91□□□□□ -1.14
SMARCE1-218ENST00000582955 C9orf116Q5BN46 136 aaPredicted RBP7.91□□□□□ -1.14
SMARCE1-218ENST00000582955 Q6ZRP5 223 aa7.91□□□□□ -1.14
SMARCE1-218ENST00000582955 BAGE3Q86Y29 109 aa7.91□□□□□ -1.14
SMARCE1-218ENST00000582955 GAGE2DQ9UEU5 116 aa7.91□□□□□ -1.14
SMARCE1-218ENST00000582955 MYCBP2O75592 4640 aa7.91□□□□□ -1.14
SMARCE1-218ENST00000582955 A0A1W2PNN7 141 aa7.9□□□□□ -1.14
SMARCE1-218ENST00000582955 H3BRM9 83 aa7.9□□□□□ -1.14
SMARCE1-218ENST00000582955 SPINK8P0C7L1 97 aa7.9□□□□□ -1.14
SMARCE1-218ENST00000582955 HSBP1O75506 76 aa7.89□□□□□ -1.15
SMARCE1-218ENST00000582955 IGLC3P0DOY3 106 aa7.89□□□□□ -1.15
SMARCE1-218ENST00000582955 HNRNPA3P51991 378 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-218ENST00000582955 COX7B2Q8TF08 81 aa7.89□□□□□ -1.15
SMARCE1-218ENST00000582955 COLCA2A8K830 154 aa7.88□□□□□ -1.15
SMARCE1-218ENST00000582955 NDUFC2-KCTD14E9PQ53 114 aa7.88□□□□□ -1.15
SMARCE1-218ENST00000582955 F8VRH5 84 aa7.88□□□□□ -1.15
SMARCE1-218ENST00000582955 CXCL5P42830 114 aa7.88□□□□□ -1.15
SMARCE1-218ENST00000582955 KRTAP4-12Q9BQ66 201 aa7.88□□□□□ -1.15
SMARCE1-218ENST00000582955 PRR3P79522 188 aaKnown RBP7.87□□□□□ -1.15
SMARCE1-218ENST00000582955 FAM19A2Q8N3H0 131 aa7.87□□□□□ -1.15
SMARCE1-218ENST00000582955 IFI27L1Q96BM0 104 aa7.87□□□□□ -1.15
SMARCE1-218ENST00000582955 FAM168BA1KXE4 195 aa7.86□□□□□ -1.15
SMARCE1-218ENST00000582955 SCO1O75880 301 aa7.86□□□□□ -1.15
SMARCE1-218ENST00000582955 ZNF22P17026 224 aaPredicted RBP7.86□□□□□ -1.15
SMARCE1-218ENST00000582955 PHF5AQ7RTV0 110 aaKnown RBP7.86□□□□□ -1.15
SMARCE1-218ENST00000582955 FAM19A5Q7Z5A7 132 aaPredicted RBP7.86□□□□□ -1.15
SMARCE1-218ENST00000582955 CHTOPQ9Y3Y2 248 aaKnown RBP7.86□□□□□ -1.15
SMARCE1-218ENST00000582955 SERF1AO75920 110 aa7.85□□□□□ -1.15
SMARCE1-218ENST00000582955 TMEM170BQ5T4T1 132 aa7.85□□□□□ -1.15
SMARCE1-218ENST00000582955 DMBT1Q9UGM3 2413 aaPredicted RBP7.84□□□□□ -1.15
SMARCE1-218ENST00000582955 PKHD1L1Q86WI1 4243 aa7.84□□□□□ -1.15
SMARCE1-218ENST00000582955 C11orf86A6NJI1 115 aa7.84□□□□□ -1.15
SMARCE1-218ENST00000582955 KRTAP29-1A8MX34 341 aaPredicted RBP7.84□□□□□ -1.15
SMARCE1-218ENST00000582955 TRAV12-1A0A0B4J245 112 aa7.83□□□□□ -1.16
SMARCE1-218ENST00000582955 LINC00310P59036 64 aa7.83□□□□□ -1.16
SMARCE1-218ENST00000582955 C9orf129Q5T035 196 aaKnown RBP7.83□□□□□ -1.16
SMARCE1-218ENST00000582955 XAGE1AQ9HD64 81 aa7.83□□□□□ -1.16
SMARCE1-218ENST00000582955 IGLV5-39A0A0G2JS06 123 aa7.82□□□□□ -1.16
SMARCE1-218ENST00000582955 H0Y8G0 127 aa7.82□□□□□ -1.16
SMARCE1-218ENST00000582955 M0QXV9 152 aa7.82□□□□□ -1.16
SMARCE1-218ENST00000582955 LEPROTL1O95214 131 aa7.82□□□□□ -1.16
SMARCE1-218ENST00000582955 OXTP01178 125 aa7.81□□□□□ -1.16
SMARCE1-218ENST00000582955 PSORS1C2Q9UIG4 136 aa7.81□□□□□ -1.16
SMARCE1-218ENST00000582955 NUPR1O60356 82 aa7.8□□□□□ -1.16
SMARCE1-218ENST00000582955 UBE2BP63146 152 aa7.8□□□□□ -1.16
SMARCE1-218ENST00000582955 KRTAP7-1Q8IUC3 87 aa7.8□□□□□ -1.16
SMARCE1-218ENST00000582955 KRTAP9-9Q9BYP9 154 aa7.8□□□□□ -1.16
SMARCE1-218ENST00000582955 KRTAP9-4Q9BYQ2 154 aa7.8□□□□□ -1.16
SMARCE1-218ENST00000582955 LRP1Q07954 4544 aaKnown RBP7.79□□□□□ -1.16
SMARCE1-218ENST00000582955 FABP4P15090 132 aa7.79□□□□□ -1.16
SMARCE1-218ENST00000582955 C1orf137Q5JT78 98 aa7.79□□□□□ -1.16
SMARCE1-218ENST00000582955 SERTAD4-AS1Q5TG53 156 aa7.79□□□□□ -1.16
SMARCE1-218ENST00000582955 HSPB8Q9UJY1 196 aa7.79□□□□□ -1.16
SMARCE1-218ENST00000582955 PFN2P35080 140 aa7.78□□□□□ -1.16
SMARCE1-218ENST00000582955 FAT3Q8TDW7 4589 aa7.78□□□□□ -1.16
SMARCE1-218ENST00000582955 TMEM223A0PJW6 202 aa7.77□□□□□ -1.17
SMARCE1-218ENST00000582955 ODF1Q14990 250 aa7.77□□□□□ -1.17
SMARCE1-218ENST00000582955 SPINK6Q6UWN8 80 aa7.77□□□□□ -1.17
SMARCE1-218ENST00000582955 ZNF625Q96I27 306 aaPredicted RBP7.77□□□□□ -1.17
SMARCE1-218ENST00000582955 HERC1Q15751 4861 aa7.77□□□□□ -1.17
SMARCE1-218ENST00000582955 HIST1H2BKO60814 126 aa7.76□□□□□ -1.17
SMARCE1-218ENST00000582955 HIST1H2BJP06899 126 aa7.76□□□□□ -1.17
SMARCE1-218ENST00000582955 HIST1H2BOP23527 126 aa7.76□□□□□ -1.17
SMARCE1-218ENST00000582955 HIST1H2BBP33778 126 aa7.76□□□□□ -1.17
SMARCE1-218ENST00000582955 HIST1H2BDP58876 126 aa7.76□□□□□ -1.17
SMARCE1-218ENST00000582955 HIST1H2BCP62807 126 aa7.76□□□□□ -1.17
SMARCE1-218ENST00000582955 HIST2H2BEQ16778 126 aa7.76□□□□□ -1.17
SMARCE1-218ENST00000582955 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.76□□□□□ -1.17
SMARCE1-218ENST00000582955 SFTA2Q6UW10 78 aa7.76□□□□□ -1.17
SMARCE1-218ENST00000582955 KRTAP11-1Q8IUC1 163 aa7.76□□□□□ -1.17
SMARCE1-218ENST00000582955 HIST1H2BHQ93079 126 aa7.76□□□□□ -1.17
SMARCE1-218ENST00000582955 HIST1H2BNQ99877 126 aa7.76□□□□□ -1.17
SMARCE1-218ENST00000582955 HIST1H2BMQ99879 126 aa7.76□□□□□ -1.17
SMARCE1-218ENST00000582955 ERG28Q9UKR5 140 aa7.76□□□□□ -1.17
SMARCE1-218ENST00000582955 C22orf24Q9Y442 160 aa7.76□□□□□ -1.17
SMARCE1-218ENST00000582955 KRTAP4-8A0A0G2JLE6 195 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms