RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 SPINK8P0C7L1 97 aa10.41□□□□□ -0.74
RNF43-206ENST00000582293 Q8IZM0 81 aa10.41□□□□□ -0.74
RNF43-206ENST00000582293 IGKV2-24A0A0C4DH68 120 aa10.4□□□□□ -0.74
RNF43-206ENST00000582293 PACRGQ96M98 296 aaPredicted RBP10.4□□□□□ -0.74
RNF43-206ENST00000582293 TOMM7Q9P0U1 55 aa10.4□□□□□ -0.74
RNF43-206ENST00000582293 CHTOPQ9Y3Y2 248 aaKnown RBP10.4□□□□□ -0.74
RNF43-206ENST00000582293 PCLOQ9Y6V0 5065 aa10.4□□□□□ -0.74
RNF43-206ENST00000582293 A0A087WYN8 130 aa10.39□□□□□ -0.75
RNF43-206ENST00000582293 FABP4P15090 132 aa10.39□□□□□ -0.75
RNF43-206ENST00000582293 COA6Q5JTJ3 125 aaKnown RBP10.39□□□□□ -0.75
RNF43-206ENST00000582293 VPS13BQ7Z7G8 4022 aa10.38□□□□□ -0.75
RNF43-206ENST00000582293 IGLV5-39A0A0G2JS06 123 aa10.38□□□□□ -0.75
RNF43-206ENST00000582293 LOC107984640A0A0U1RRK4 108 aa10.38□□□□□ -0.75
RNF43-206ENST00000582293 PTTG1IPP53801 180 aa10.38□□□□□ -0.75
RNF43-206ENST00000582293 ODF1Q14990 250 aa10.38□□□□□ -0.75
RNF43-206ENST00000582293 PLAC8Q9NZF1 115 aa10.38□□□□□ -0.75
RNF43-206ENST00000582293 F8VRH5 84 aa10.37□□□□□ -0.75
RNF43-206ENST00000582293 PRSS2P07478 247 aa10.37□□□□□ -0.75
RNF43-206ENST00000582293 MAJINQ3KP22 176 aa10.37□□□□□ -0.75
RNF43-206ENST00000582293 C9orf116Q5BN46 136 aaPredicted RBP10.37□□□□□ -0.75
RNF43-206ENST00000582293 Q5VSD8 79 aa10.37□□□□□ -0.75
RNF43-206ENST00000582293 COX7B2Q8TF08 81 aa10.37□□□□□ -0.75
RNF43-206ENST00000582293 TRBV30A0A0K0K1B3 111 aa10.36□□□□□ -0.75
RNF43-206ENST00000582293 TLX1NBP0CAT3 122 aa10.36□□□□□ -0.75
RNF43-206ENST00000582293 GAGE2BQ13066 116 aa10.36□□□□□ -0.75
RNF43-206ENST00000582293 C6orf226Q5I0X4 101 aa10.36□□□□□ -0.75
RNF43-206ENST00000582293 Q6ZRP5 223 aa10.36□□□□□ -0.75
RNF43-206ENST00000582293 LINC00528Q8N1L1 170 aa10.36□□□□□ -0.75
RNF43-206ENST00000582293 H3BRM9 83 aa10.35□□□□□ -0.75
RNF43-206ENST00000582293 KRTAP10-4P60372 401 aaPredicted RBP10.35□□□□□ -0.75
RNF43-206ENST00000582293 HSPB8Q9UJY1 196 aa10.35□□□□□ -0.75
RNF43-206ENST00000582293 EPM2AB3EWF7 344 aa10.34□□□□□ -0.75
RNF43-206ENST00000582293 H0Y8G0 127 aa10.34□□□□□ -0.75
RNF43-206ENST00000582293 CKS1BP61024 79 aa10.34□□□□□ -0.75
RNF43-206ENST00000582293 TMEM170BQ5T4T1 132 aa10.34□□□□□ -0.75
RNF43-206ENST00000582293 STPG4Q8N801 248 aa10.34□□□□□ -0.75
RNF43-206ENST00000582293 TMEM223A0PJW6 202 aa10.33□□□□□ -0.76
RNF43-206ENST00000582293 RPL18AQ02543 176 aaKnown RBP10.33□□□□□ -0.76
RNF43-206ENST00000582293 PKIGQ9Y2B9 76 aa10.33□□□□□ -0.76
RNF43-206ENST00000582293 A0A1W2PNN7 141 aa10.32□□□□□ -0.76
RNF43-206ENST00000582293 CXCL5P42830 114 aa10.32□□□□□ -0.76
RNF43-206ENST00000582293 LINC00474Q9P2X8 69 aa10.32□□□□□ -0.76
RNF43-206ENST00000582293 DPH3Q96FX2 82 aa10.31□□□□□ -0.76
RNF43-206ENST00000582293 PMCHL2Q9BQD1 86 aa10.31□□□□□ -0.76
RNF43-206ENST00000582293 NDUFC2-KCTD14E9PQ53 114 aa10.3□□□□□ -0.76
RNF43-206ENST00000582293 FAM229AH3BQW9 127 aa10.3□□□□□ -0.76
RNF43-206ENST00000582293 KRTAP7-1Q8IUC3 87 aa10.3□□□□□ -0.76
RNF43-206ENST00000582293 GAGE2EQ4V326 116 aa10.29□□□□□ -0.76
RNF43-206ENST00000582293 C9orf129Q5T035 196 aaKnown RBP10.29□□□□□ -0.76
RNF43-206ENST00000582293 GAGE2DQ9UEU5 116 aa10.29□□□□□ -0.76
RNF43-206ENST00000582293 FAM168BA1KXE4 195 aa10.28□□□□□ -0.76
RNF43-206ENST00000582293 SYS1-DBNDD2H3BUS1 97 aa10.28□□□□□ -0.76
RNF43-206ENST00000582293 MAP1LC3CQ9BXW4 147 aa10.28□□□□□ -0.76
RNF43-206ENST00000582293 SRRM2Q9UQ35 2752 aaKnown RBP10.28□□□□□ -0.76
RNF43-206ENST00000582293 ZNF625Q96I27 306 aaPredicted RBP10.27□□□□□ -0.77
RNF43-206ENST00000582293 DPM2O94777 84 aa10.26□□□□□ -0.77
RNF43-206ENST00000582293 PLNP26678 52 aa10.26□□□□□ -0.77
RNF43-206ENST00000582293 C3orf79P0CE67 100 aa10.25□□□□□ -0.77
RNF43-206ENST00000582293 IGKCP01834 107 aa10.24□□□□□ -0.77
RNF43-206ENST00000582293 TSPEAR-AS2P59090 65 aa10.24□□□□□ -0.77
RNF43-206ENST00000582293 LINC01545Q5VT33 79 aa10.24□□□□□ -0.77
RNF43-206ENST00000582293 PKHD1L1Q86WI1 4243 aa10.23□□□□□ -0.77
RNF43-206ENST00000582293 PLA2G1BP04054 148 aaKnown RBP10.23□□□□□ -0.77
RNF43-206ENST00000582293 RPL37AP61513 92 aaKnown RBP10.23□□□□□ -0.77
RNF43-206ENST00000582293 XAGE1AQ9HD64 81 aa10.23□□□□□ -0.77
RNF43-206ENST00000582293 HNRNPA3P51991 378 aaKnown RBP10.22□□□□□ -0.77
RNF43-206ENST00000582293 PET117Q6UWS5 81 aa10.22□□□□□ -0.77
RNF43-206ENST00000582293 PHF5AQ7RTV0 110 aaKnown RBP10.22□□□□□ -0.77
RNF43-206ENST00000582293 HIST3H2BBQ8N257 126 aa10.22□□□□□ -0.77
RNF43-206ENST00000582293 SERTAD4-AS1Q5TG53 156 aa10.21□□□□□ -0.77
RNF43-206ENST00000582293 FAM19A5Q7Z5A7 132 aaPredicted RBP10.21□□□□□ -0.77
RNF43-206ENST00000582293 KRTAP11-1Q8IUC1 163 aa10.21□□□□□ -0.77
RNF43-206ENST00000582293 ERG28Q9UKR5 140 aa10.21□□□□□ -0.77
RNF43-206ENST00000582293 INAFM2P0DMQ5 153 aa10.2□□□□□ -0.78
RNF43-206ENST00000582293 LEPROTO15243 131 aa10.19□□□□□ -0.78
RNF43-206ENST00000582293 PFN2P35080 140 aa10.19□□□□□ -0.78
RNF43-206ENST00000582293 KRTDAPP60985 99 aa10.19□□□□□ -0.78
RNF43-206ENST00000582293 C7orf33Q8WU49 177 aa10.19□□□□□ -0.78
RNF43-206ENST00000582293 HIST1H2BLQ99880 126 aa10.19□□□□□ -0.78
RNF43-206ENST00000582293 MYCBP2O75592 4640 aa10.18□□□□□ -0.78
RNF43-206ENST00000582293 PRR3P79522 188 aaKnown RBP10.17□□□□□ -0.78
RNF43-206ENST00000582293 SFTA2Q6UW10 78 aa10.17□□□□□ -0.78
RNF43-206ENST00000582293 NDUFA12Q9UI09 145 aa10.17□□□□□ -0.78
RNF43-206ENST00000582293 J3QQQ9 107 aa10.16□□□□□ -0.78
RNF43-206ENST00000582293 COX17Q14061 63 aa10.16□□□□□ -0.78
RNF43-206ENST00000582293 PLEKHB2Q96CS7 222 aa10.16□□□□□ -0.78
RNF43-206ENST00000582293 E9PLD3 99 aa10.15□□□□□ -0.78
RNF43-206ENST00000582293 M0QXV9 152 aa10.15□□□□□ -0.78
RNF43-206ENST00000582293 SNRPEP62304 92 aaKnown RBP10.15□□□□□ -0.78
RNF43-206ENST00000582293 Q8NDZ9 215 aa10.15□□□□□ -0.78
RNF43-206ENST00000582293 SND1-IT1Q9HBX3 110 aa10.15□□□□□ -0.78
RNF43-206ENST00000582293 PLA2G2DQ9UNK4 145 aa10.15□□□□□ -0.78
RNF43-206ENST00000582293 HERVK_113P61574 105 aa10.14□□□□□ -0.79
RNF43-206ENST00000582293 C22orf24Q9Y442 160 aa10.14□□□□□ -0.79
RNF43-206ENST00000582293 FAT3Q8TDW7 4589 aa10.14□□□□□ -0.79
RNF43-206ENST00000582293 LRP1Q07954 4544 aaKnown RBP10.14□□□□□ -0.79
RNF43-206ENST00000582293 IGKV2D-26A0A0A0MRZ7 120 aa10.13□□□□□ -0.79
RNF43-206ENST00000582293 A0A0U1RRA0 63 aa10.13□□□□□ -0.79
RNF43-206ENST00000582293 C5orf52A6NGY3 159 aa10.13□□□□□ -0.79
RNF43-206ENST00000582293 S100A6P06703 90 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms