RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 CST9LQ9H4G1 147 aa7.66□□□□□ -1.18
SMARCD2-209ENST00000581832 TINCRA0A1B0GVN0 87 aa7.65□□□□□ -1.18
SMARCD2-209ENST00000581832 FAM168BA1KXE4 195 aa7.65□□□□□ -1.18
SMARCD2-209ENST00000581832 LINC00614P0C842 121 aa7.65□□□□□ -1.18
SMARCD2-209ENST00000581832 NDUFA5Q16718 116 aa7.65□□□□□ -1.18
SMARCD2-209ENST00000581832 PHF5AQ7RTV0 110 aaKnown RBP7.65□□□□□ -1.18
SMARCD2-209ENST00000581832 SMIM1B2RUZ4 78 aa7.64□□□□□ -1.19
SMARCD2-209ENST00000581832 C9orf129Q5T035 196 aaKnown RBP7.64□□□□□ -1.19
SMARCD2-209ENST00000581832 KRTAP11-1Q8IUC1 163 aa7.64□□□□□ -1.19
SMARCD2-209ENST00000581832 GEMIN7Q9H840 131 aaKnown RBP7.64□□□□□ -1.19
SMARCD2-209ENST00000581832 NDUFC2-KCTD14E9PQ53 114 aa7.63□□□□□ -1.19
SMARCD2-209ENST00000581832 PMVKQ15126 192 aa7.63□□□□□ -1.19
SMARCD2-209ENST00000581832 GAGE2EQ4V326 116 aa7.63□□□□□ -1.19
SMARCD2-209ENST00000581832 PDZD11Q5EBL8 140 aa7.63□□□□□ -1.19
SMARCD2-209ENST00000581832 C6orf226Q5I0X4 101 aa7.63□□□□□ -1.19
SMARCD2-209ENST00000581832 SMCO4Q9NRQ5 59 aa7.63□□□□□ -1.19
SMARCD2-209ENST00000581832 TOMM7Q9P0U1 55 aa7.63□□□□□ -1.19
SMARCD2-209ENST00000581832 GAGE2DQ9UEU5 116 aa7.63□□□□□ -1.19
SMARCD2-209ENST00000581832 HMCN2Q8NDA2 5059 aa7.62□□□□□ -1.19
SMARCD2-209ENST00000581832 SPINK6Q6UWN8 80 aa7.62□□□□□ -1.19
SMARCD2-209ENST00000581832 LINC00469Q8N7U9 141 aa7.62□□□□□ -1.19
SMARCD2-209ENST00000581832 PACRGQ96M98 296 aaPredicted RBP7.62□□□□□ -1.19
SMARCD2-209ENST00000581832 PSORS1C2Q9UIG4 136 aa7.62□□□□□ -1.19
SMARCD2-209ENST00000581832 PRSS2P07478 247 aa7.61□□□□□ -1.19
SMARCD2-209ENST00000581832 PMCHL1Q16048 86 aa7.61□□□□□ -1.19
SMARCD2-209ENST00000581832 F8VRH5 84 aa7.6□□□□□ -1.19
SMARCD2-209ENST00000581832 HBDP02042 147 aa7.6□□□□□ -1.19
SMARCD2-209ENST00000581832 IGLC3P0DOY3 106 aa7.6□□□□□ -1.19
SMARCD2-209ENST00000581832 CKS1BP61024 79 aa7.6□□□□□ -1.19
SMARCD2-209ENST00000581832 CBLN2Q8IUK8 224 aa7.6□□□□□ -1.19
SMARCD2-209ENST00000581832 SLC7A5P1Q8MH63 180 aa7.6□□□□□ -1.19
SMARCD2-209ENST00000581832 LINC01600Q96MT4 127 aa7.6□□□□□ -1.19
SMARCD2-209ENST00000581832 SPINK8P0C7L1 97 aa7.59□□□□□ -1.19
SMARCD2-209ENST00000581832 FAM19A5Q7Z5A7 132 aaPredicted RBP7.59□□□□□ -1.19
SMARCD2-209ENST00000581832 COX7B2Q8TF08 81 aa7.59□□□□□ -1.19
SMARCD2-209ENST00000581832 IGLV5-39A0A0G2JS06 123 aa7.58□□□□□ -1.2
SMARCD2-209ENST00000581832 CXCL5P42830 114 aa7.58□□□□□ -1.2
SMARCD2-209ENST00000581832 RAB5BP61020 215 aa7.58□□□□□ -1.2
SMARCD2-209ENST00000581832 ZNF22P17026 224 aaPredicted RBP7.57□□□□□ -1.2
SMARCD2-209ENST00000581832 SERTAD4-AS1Q5TG53 156 aa7.57□□□□□ -1.2
SMARCD2-209ENST00000581832 M0QXV9 152 aa7.56□□□□□ -1.2
SMARCD2-209ENST00000581832 ATP5LO75964 103 aa7.56□□□□□ -1.2
SMARCD2-209ENST00000581832 KRTAP10-8P60410 259 aa7.56□□□□□ -1.2
SMARCD2-209ENST00000581832 ODF1Q14990 250 aa7.56□□□□□ -1.2
SMARCD2-209ENST00000581832 C1orf137Q5JT78 98 aa7.56□□□□□ -1.2
SMARCD2-209ENST00000581832 CHCHD1Q96BP2 118 aaKnown RBP7.56□□□□□ -1.2
SMARCD2-209ENST00000581832 XAGE1AQ9HD64 81 aa7.56□□□□□ -1.2
SMARCD2-209ENST00000581832 IGLV7-43P04211 117 aa7.55□□□□□ -1.2
SMARCD2-209ENST00000581832 C11orf86A6NJI1 115 aa7.54□□□□□ -1.2
SMARCD2-209ENST00000581832 H3BRM9 83 aa7.54□□□□□ -1.2
SMARCD2-209ENST00000581832 TRGC2P03986 189 aa7.54□□□□□ -1.2
SMARCD2-209ENST00000581832 NDUFA6P56556 154 aa7.54□□□□□ -1.2
SMARCD2-209ENST00000581832 LINC00310P59036 64 aa7.54□□□□□ -1.2
SMARCD2-209ENST00000581832 BAGE3Q86Y29 109 aa7.54□□□□□ -1.2
SMARCD2-209ENST00000581832 C22orf24Q9Y442 160 aa7.53□□□□□ -1.2
SMARCD2-209ENST00000581832 TRAV12-1A0A0B4J245 112 aa7.52□□□□□ -1.21
SMARCD2-209ENST00000581832 COLCA2A8K830 154 aa7.52□□□□□ -1.21
SMARCD2-209ENST00000581832 REG3GQ6UW15 175 aa7.52□□□□□ -1.21
SMARCD2-209ENST00000581832 PLA2G2DQ9UNK4 145 aa7.52□□□□□ -1.21
SMARCD2-209ENST00000581832 FAM19A2Q8N3H0 131 aa7.51□□□□□ -1.21
SMARCD2-209ENST00000581832 IFI27L1Q96BM0 104 aa7.51□□□□□ -1.21
SMARCD2-209ENST00000581832 TP73-AS1Q9UF72 201 aa7.51□□□□□ -1.21
SMARCD2-209ENST00000581832 UBE2BP63146 152 aa7.5□□□□□ -1.21
SMARCD2-209ENST00000581832 CHTOPQ9Y3Y2 248 aaKnown RBP7.5□□□□□ -1.21
SMARCD2-209ENST00000581832 IGLV5-37A0A075B6J1 123 aa7.49□□□□□ -1.21
SMARCD2-209ENST00000581832 NUPR1O60356 82 aa7.49□□□□□ -1.21
SMARCD2-209ENST00000581832 TMEM170BQ5T4T1 132 aa7.49□□□□□ -1.21
SMARCD2-209ENST00000581832 ZNF625Q96I27 306 aaPredicted RBP7.49□□□□□ -1.21
SMARCD2-209ENST00000581832 TMEM223A0PJW6 202 aa7.48□□□□□ -1.21
SMARCD2-209ENST00000581832 H0Y9J4 135 aa7.48□□□□□ -1.21
SMARCD2-209ENST00000581832 KRTAP1-4P0C5Y4 121 aa7.48□□□□□ -1.21
SMARCD2-209ENST00000581832 MRPL55Q7Z7F7 128 aaKnown RBP7.48□□□□□ -1.21
SMARCD2-209ENST00000581832 HSBP1O75506 76 aa7.47□□□□□ -1.21
SMARCD2-209ENST00000581832 SERF1AO75920 110 aa7.47□□□□□ -1.21
SMARCD2-209ENST00000581832 LBHQ53QV2 105 aaPredicted RBP7.47□□□□□ -1.21
SMARCD2-209ENST00000581832 DIRC1Q969H9 104 aa7.47□□□□□ -1.21
SMARCD2-209ENST00000581832 LINC00167Q96N53 147 aa7.47□□□□□ -1.21
SMARCD2-209ENST00000581832 ERG28Q9UKR5 140 aa7.47□□□□□ -1.21
SMARCD2-209ENST00000581832 PFN2P35080 140 aa7.46□□□□□ -1.22
SMARCD2-209ENST00000581832 COX17Q14061 63 aa7.46□□□□□ -1.22
SMARCD2-209ENST00000581832 LRP2P98164 4655 aa7.46□□□□□ -1.22
SMARCD2-209ENST00000581832 UBR4Q5T4S7 5183 aa7.46□□□□□ -1.22
SMARCD2-209ENST00000581832 ZNF861PO60384 105 aa7.45□□□□□ -1.22
SMARCD2-209ENST00000581832 Q8NDZ9 215 aa7.45□□□□□ -1.22
SMARCD2-209ENST00000581832 SND1-IT1Q9HBX3 110 aa7.45□□□□□ -1.22
SMARCD2-209ENST00000581832 LEPROTL1O95214 131 aa7.44□□□□□ -1.22
SMARCD2-209ENST00000581832 VPREB1P12018 145 aa7.44□□□□□ -1.22
SMARCD2-209ENST00000581832 RPL37AP8A6NKH3 93 aa7.43□□□□□ -1.22
SMARCD2-209ENST00000581832 SCO1O75880 301 aa7.43□□□□□ -1.22
SMARCD2-209ENST00000581832 SFTA2Q6UW10 78 aa7.43□□□□□ -1.22
SMARCD2-209ENST00000581832 PRR26Q8N8Z3 221 aa7.43□□□□□ -1.22
SMARCD2-209ENST00000581832 GAGE10A6NGK3 116 aa7.42□□□□□ -1.22
SMARCD2-209ENST00000581832 BCE1O60756 84 aa7.42□□□□□ -1.22
SMARCD2-209ENST00000581832 KRTAP13-1Q8IUC0 172 aa7.42□□□□□ -1.22
SMARCD2-209ENST00000581832 IGLV1-50A0A075B6I6 118 aa7.4□□□□□ -1.22
SMARCD2-209ENST00000581832 NKAPP1Q8N9T2 125 aa7.4□□□□□ -1.22
SMARCD2-209ENST00000581832 H0Y8G0 127 aa7.39□□□□□ -1.23
SMARCD2-209ENST00000581832 HIST1H2BKO60814 126 aa7.39□□□□□ -1.23
SMARCD2-209ENST00000581832 HIST1H2BJP06899 126 aa7.39□□□□□ -1.23
SMARCD2-209ENST00000581832 FABP4P15090 132 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms