RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 IGKV2D-28P01615 120 aa6.99□□□□□ -1.29
CSNK1D-218ENST00000581655 TAGLN2P37802 199 aaKnown RBP6.99□□□□□ -1.29
CSNK1D-218ENST00000581655 XP32Q5T750 250 aa6.99□□□□□ -1.29
CSNK1D-218ENST00000581655 FAM104BQ5XKR9 115 aa6.99□□□□□ -1.29
CSNK1D-218ENST00000581655 DAND5Q8N907 189 aa6.99□□□□□ -1.29
CSNK1D-218ENST00000581655 PLEKHB2Q96CS7 222 aa6.99□□□□□ -1.29
CSNK1D-218ENST00000581655 TMEM141Q96I45 108 aa6.99□□□□□ -1.29
CSNK1D-218ENST00000581655 IGLV5-37A0A075B6J1 123 aa6.98□□□□□ -1.29
CSNK1D-218ENST00000581655 SCO1O75880 301 aa6.98□□□□□ -1.29
CSNK1D-218ENST00000581655 CKS2P33552 79 aa6.98□□□□□ -1.29
CSNK1D-218ENST00000581655 FAM19A1Q7Z5A9 133 aa6.98□□□□□ -1.29
CSNK1D-218ENST00000581655 NKAPP1Q8N9T2 125 aa6.98□□□□□ -1.29
CSNK1D-218ENST00000581655 ZC2HC1BQ5TFG8 222 aa6.97□□□□□ -1.29
CSNK1D-218ENST00000581655 TEX43Q6ZNM6 134 aa6.97□□□□□ -1.29
CSNK1D-218ENST00000581655 PYGO1Q9Y3Y4 419 aa6.97□□□□□ -1.29
CSNK1D-218ENST00000581655 Q8NBF4 154 aa6.96□□□□□ -1.3
CSNK1D-218ENST00000581655 C2orf88Q9BSF0 95 aa6.96□□□□□ -1.3
CSNK1D-218ENST00000581655 EIF5A2Q9GZV4 153 aaKnown RBP6.96□□□□□ -1.3
CSNK1D-218ENST00000581655 TMEM250H0YL14 139 aa6.95□□□□□ -1.3
CSNK1D-218ENST00000581655 NPYP01303 97 aa6.95□□□□□ -1.3
CSNK1D-218ENST00000581655 CEBPGP53567 150 aa6.95□□□□□ -1.3
CSNK1D-218ENST00000581655 TMEM126AQ9H061 195 aa6.95□□□□□ -1.3
CSNK1D-218ENST00000581655 OSTCQ9NRP0 149 aa6.95□□□□□ -1.3
CSNK1D-218ENST00000581655 TMEM238C9JI98 176 aa6.94□□□□□ -1.3
CSNK1D-218ENST00000581655 D6R8Y8 96 aa6.94□□□□□ -1.3
CSNK1D-218ENST00000581655 M0R2T5 61 aa6.94□□□□□ -1.3
CSNK1D-218ENST00000581655 RAB5AP20339 215 aa6.94□□□□□ -1.3
CSNK1D-218ENST00000581655 CBLN2Q8IUK8 224 aa6.94□□□□□ -1.3
CSNK1D-218ENST00000581655 NDUFA12Q9UI09 145 aa6.94□□□□□ -1.3
CSNK1D-218ENST00000581655 SPINK1P00995 79 aa6.93□□□□□ -1.3
CSNK1D-218ENST00000581655 CXCL5P42830 114 aa6.93□□□□□ -1.3
CSNK1D-218ENST00000581655 LINC01551Q86U37 167 aa6.93□□□□□ -1.3
CSNK1D-218ENST00000581655 HIGD2AQ9BW72 106 aa6.93□□□□□ -1.3
CSNK1D-218ENST00000581655 V9GYV3 84 aa6.93□□□□□ -1.3
CSNK1D-218ENST00000581655 SPRR4Q96PI1 79 aa6.92□□□□□ -1.3
CSNK1D-218ENST00000581655 GNB1LQ9BYB4 327 aa6.92□□□□□ -1.3
CSNK1D-218ENST00000581655 CDKN2A-AS1Q9UH64 79 aa6.92□□□□□ -1.3
CSNK1D-218ENST00000581655 IGLV8-61A0A075B6I0 122 aa6.91□□□□□ -1.3
CSNK1D-218ENST00000581655 M0R378 163 aa6.91□□□□□ -1.3
CSNK1D-218ENST00000581655 RAB5BP61020 215 aa6.91□□□□□ -1.3
CSNK1D-218ENST00000581655 AMELXQ99217 191 aa6.91□□□□□ -1.3
CSNK1D-218ENST00000581655 VCX2Q9H322 139 aa6.91□□□□□ -1.3
CSNK1D-218ENST00000581655 NAT8BQ9UHF3 227 aa6.91□□□□□ -1.3
CSNK1D-218ENST00000581655 SSPOA2VEC9 5147 aa6.91□□□□□ -1.3
CSNK1D-218ENST00000581655 PCOTHQ58A44 107 aa6.9□□□□□ -1.3
CSNK1D-218ENST00000581655 C2orf66Q6UXQ4 117 aa6.9□□□□□ -1.3
CSNK1D-218ENST00000581655 SMIM7Q9BQ49 75 aa6.9□□□□□ -1.3
CSNK1D-218ENST00000581655 FAM19A3Q7Z5A8 133 aa6.89□□□□□ -1.31
CSNK1D-218ENST00000581655 Q8N377 158 aa6.89□□□□□ -1.31
CSNK1D-218ENST00000581655 FAM19A2Q8N3H0 131 aa6.89□□□□□ -1.31
CSNK1D-218ENST00000581655 HERVK_113P63121 156 aa6.88□□□□□ -1.31
CSNK1D-218ENST00000581655 FAM74A3Q4VXF1 159 aa6.88□□□□□ -1.31
CSNK1D-218ENST00000581655 USH2AO75445 5202 aa6.87□□□□□ -1.31
CSNK1D-218ENST00000581655 FLGP20930 4061 aaPredicted RBP6.87□□□□□ -1.31
CSNK1D-218ENST00000581655 VPREB1P12018 145 aa6.87□□□□□ -1.31
CSNK1D-218ENST00000581655 SEC11AP67812 179 aa6.87□□□□□ -1.31
CSNK1D-218ENST00000581655 GEMIN7Q9H840 131 aaKnown RBP6.87□□□□□ -1.31
CSNK1D-218ENST00000581655 CYSLTR1Q9Y271 337 aa6.87□□□□□ -1.31
CSNK1D-218ENST00000581655 A0A1B0GW15 77 aa6.86□□□□□ -1.31
CSNK1D-218ENST00000581655 SMIM1B2RUZ4 78 aa6.86□□□□□ -1.31
CSNK1D-218ENST00000581655 PPBPP02775 128 aa6.86□□□□□ -1.31
CSNK1D-218ENST00000581655 COX7B2Q8TF08 81 aa6.86□□□□□ -1.31
CSNK1D-218ENST00000581655 ZNF706Q9Y5V0 76 aaPredicted RBP6.86□□□□□ -1.31
CSNK1D-218ENST00000581655 F8W036 122 aa6.85□□□□□ -1.31
CSNK1D-218ENST00000581655 LOC389332A0A1B0GUA5 103 aa6.84□□□□□ -1.31
CSNK1D-218ENST00000581655 SMIM27A0A1W2PRY6 76 aa6.84□□□□□ -1.31
CSNK1D-218ENST00000581655 SLC25A20O43772 301 aa6.84□□□□□ -1.31
CSNK1D-218ENST00000581655 RPS29P62273 56 aaKnown RBP6.84□□□□□ -1.31
CSNK1D-218ENST00000581655 MRPL54Q6P161 138 aaKnown RBP6.84□□□□□ -1.31
CSNK1D-218ENST00000581655 TMEM136Q6ZRR5 245 aa6.84□□□□□ -1.31
CSNK1D-218ENST00000581655 AKAP14Q86UN6 197 aa6.84□□□□□ -1.31
CSNK1D-218ENST00000581655 ORMDL3Q8N138 153 aa6.84□□□□□ -1.31
CSNK1D-218ENST00000581655 PRELID3AQ96N28 172 aa6.84□□□□□ -1.31
CSNK1D-218ENST00000581655 IGIPA6NJ69 53 aa6.83□□□□□ -1.32
CSNK1D-218ENST00000581655 PDZD11Q5EBL8 140 aa6.83□□□□□ -1.32
CSNK1D-218ENST00000581655 FCGBPQ9Y6R7 5405 aaPredicted RBP6.83□□□□□ -1.32
CSNK1D-218ENST00000581655 S100A8P05109 93 aa6.82□□□□□ -1.32
CSNK1D-218ENST00000581655 NPSP0C0P6 89 aa6.82□□□□□ -1.32
CSNK1D-218ENST00000581655 PFN2P35080 140 aa6.82□□□□□ -1.32
CSNK1D-218ENST00000581655 TCTE3Q8IZS6 198 aa6.82□□□□□ -1.32
CSNK1D-218ENST00000581655 A0A1B0GXF2 115 aa6.81□□□□□ -1.32
CSNK1D-218ENST00000581655 RPL24P83731 157 aaKnown RBP6.81□□□□□ -1.32
CSNK1D-218ENST00000581655 MOBPQ13875 183 aa6.81□□□□□ -1.32
CSNK1D-218ENST00000581655 COX6B2Q6YFQ2 88 aa6.81□□□□□ -1.32
CSNK1D-218ENST00000581655 SLC51BQ86UW2 128 aa6.81□□□□□ -1.32
CSNK1D-218ENST00000581655 Q8NDZ9 215 aa6.81□□□□□ -1.32
CSNK1D-218ENST00000581655 SND1-IT1Q9HBX3 110 aa6.81□□□□□ -1.32
CSNK1D-218ENST00000581655 PRSS47A8MTI9 375 aa6.8□□□□□ -1.32
CSNK1D-218ENST00000581655 RAB14P61106 215 aa6.8□□□□□ -1.32
CSNK1D-218ENST00000581655 RPL23P62829 140 aaKnown RBP6.8□□□□□ -1.32
CSNK1D-218ENST00000581655 MAP1LC3AQ9H492 121 aa6.8□□□□□ -1.32
CSNK1D-218ENST00000581655 IGLV9-49A0A0B4J1Y8 123 aa6.79□□□□□ -1.32
CSNK1D-218ENST00000581655 ATP5LO75964 103 aa6.79□□□□□ -1.32
CSNK1D-218ENST00000581655 SRP19P09132 144 aaKnown RBP6.79□□□□□ -1.32
CSNK1D-218ENST00000581655 SPINK8P0C7L1 97 aa6.79□□□□□ -1.32
CSNK1D-218ENST00000581655 PAPPA-AS1Q5QFB9 102 aa6.79□□□□□ -1.32
CSNK1D-218ENST00000581655 Q8N8P6 123 aa6.79□□□□□ -1.32
CSNK1D-218ENST00000581655 BLOC1S1P78537 153 aa6.78□□□□□ -1.32
CSNK1D-218ENST00000581655 ADIRFQ15847 76 aa6.78□□□□□ -1.32
CSNK1D-218ENST00000581655 ORMDL2Q53FV1 153 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms