RNA–Protein interactions for RNA: ENST00000578649.1

UBB-207, Transcript of ubiquitin B, humanhuman

TSL 5

Gene UBB, Length 477 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-207ENST00000578649 C14orf177Q52M58 125 aa8.34□□□□□ -1.07
UBB-207ENST00000578649 TMEM170BQ5T4T1 132 aa8.34□□□□□ -1.07
UBB-207ENST00000578649 CLPSL2Q6UWE3 100 aa8.34□□□□□ -1.07
UBB-207ENST00000578649 LINC00269Q8N2A0 174 aa8.34□□□□□ -1.07
UBB-207ENST00000578649 OPRPNQ99935 248 aaPredicted RBP8.34□□□□□ -1.07
UBB-207ENST00000578649 PRR34Q9NV39 138 aa8.34□□□□□ -1.07
UBB-207ENST00000578649 DLEU1O43261 78 aa8.33□□□□□ -1.08
UBB-207ENST00000578649 ANKRD39Q53RE8 183 aa8.33□□□□□ -1.08
UBB-207ENST00000578649 KRTAP26-1Q6PEX3 210 aa8.33□□□□□ -1.08
UBB-207ENST00000578649 Q6ZUT4 128 aa8.33□□□□□ -1.08
UBB-207ENST00000578649 GEMIN7Q9H840 131 aaKnown RBP8.33□□□□□ -1.08
UBB-207ENST00000578649 IGLV4-69A0A075B6H9 119 aa8.32□□□□□ -1.08
UBB-207ENST00000578649 TINCRA0A1B0GVN0 87 aa8.32□□□□□ -1.08
UBB-207ENST00000578649 H3BRM9 83 aa8.32□□□□□ -1.08
UBB-207ENST00000578649 CDC42SE2Q9NRR3 84 aa8.32□□□□□ -1.08
UBB-207ENST00000578649 A0A0J9YXV3 536 aa8.31□□□□□ -1.08
UBB-207ENST00000578649 KRTAP29-1A8MX34 341 aaPredicted RBP8.31□□□□□ -1.08
UBB-207ENST00000578649 E9PLD3 99 aa8.31□□□□□ -1.08
UBB-207ENST00000578649 HERVK_113P63121 156 aa8.31□□□□□ -1.08
UBB-207ENST00000578649 A0A1B0GUV1 79 aa8.3□□□□□ -1.08
UBB-207ENST00000578649 LINC00587B1AMM8 73 aa8.3□□□□□ -1.08
UBB-207ENST00000578649 UBE2D1P51668 147 aa8.3□□□□□ -1.08
UBB-207ENST00000578649 RNASE13Q5GAN3 156 aaKnown RBP8.3□□□□□ -1.08
UBB-207ENST00000578649 BOD1L2Q8IYS8 172 aa8.3□□□□□ -1.08
UBB-207ENST00000578649 PLEKHB2Q96CS7 222 aa8.3□□□□□ -1.08
UBB-207ENST00000578649 LRP1Q07954 4544 aaKnown RBP8.29□□□□□ -1.08
UBB-207ENST00000578649 IGLV4-60A0A075B6I1 120 aa8.29□□□□□ -1.08
UBB-207ENST00000578649 IGLV10-54A0A075B6I4 117 aa8.29□□□□□ -1.08
UBB-207ENST00000578649 CCL25O15444 150 aa8.29□□□□□ -1.08
UBB-207ENST00000578649 REG3AQ06141 175 aa8.29□□□□□ -1.08
UBB-207ENST00000578649 FAM19A3Q7Z5A8 133 aa8.29□□□□□ -1.08
UBB-207ENST00000578649 M0R143 59 aa8.28□□□□□ -1.08
UBB-207ENST00000578649 ZNF22P17026 224 aaPredicted RBP8.28□□□□□ -1.08
UBB-207ENST00000578649 LGALS3P17931 250 aaKnown RBP8.28□□□□□ -1.08
UBB-207ENST00000578649 LINC00469Q8N7U9 141 aa8.28□□□□□ -1.08
UBB-207ENST00000578649 C9orf163Q8N9P6 203 aa8.28□□□□□ -1.08
UBB-207ENST00000578649 FAM104AQ969W3 186 aa8.28□□□□□ -1.08
UBB-207ENST00000578649 TRAV13-1A0A0B4J241 112 aa8.27□□□□□ -1.09
UBB-207ENST00000578649 TMEM223A0PJW6 202 aa8.27□□□□□ -1.09
UBB-207ENST00000578649 PANO1I0J062 215 aa8.27□□□□□ -1.09
UBB-207ENST00000578649 LEPROTO15243 131 aa8.27□□□□□ -1.09
UBB-207ENST00000578649 SS18Q15532 418 aa8.27□□□□□ -1.09
UBB-207ENST00000578649 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.27□□□□□ -1.09
UBB-207ENST00000578649 IGKV2D-26A0A0A0MRZ7 120 aa8.26□□□□□ -1.09
UBB-207ENST00000578649 SDIM1Q6ZPB5 146 aa8.26□□□□□ -1.09
UBB-207ENST00000578649 PCP2Q8IVA1 136 aa8.26□□□□□ -1.09
UBB-207ENST00000578649 HIGD1BQ9P298 99 aa8.26□□□□□ -1.09
UBB-207ENST00000578649 IGLV5-45A0A087WSX0 123 aa8.25□□□□□ -1.09
UBB-207ENST00000578649 TRAV8-4A0A0B4J246 113 aa8.25□□□□□ -1.09
UBB-207ENST00000578649 MYMXA0A1B0GTQ4 84 aa8.25□□□□□ -1.09
UBB-207ENST00000578649 LBHQ53QV2 105 aaPredicted RBP8.25□□□□□ -1.09
UBB-207ENST00000578649 LINC00242Q5T6M2 205 aa8.25□□□□□ -1.09
UBB-207ENST00000578649 FAT3Q8TDW7 4589 aa8.25□□□□□ -1.09
UBB-207ENST00000578649 IGHV1-58A0A0C4DH39 117 aa8.24□□□□□ -1.09
UBB-207ENST00000578649 IGKV3OR2-268A0A0C4DH90 116 aa8.24□□□□□ -1.09
UBB-207ENST00000578649 ZNF815PA8K554 130 aa8.24□□□□□ -1.09
UBB-207ENST00000578649 J3QQQ9 107 aa8.24□□□□□ -1.09
UBB-207ENST00000578649 SLPIP03973 132 aa8.23□□□□□ -1.09
UBB-207ENST00000578649 RPL37AP61513 92 aaKnown RBP8.23□□□□□ -1.09
UBB-207ENST00000578649 CNBPP62633 177 aaKnown RBP8.23□□□□□ -1.09
UBB-207ENST00000578649 SCGB1D4Q6XE38 83 aa8.23□□□□□ -1.09
UBB-207ENST00000578649 HMCN2Q8NDA2 5059 aa8.22□□□□□ -1.09
UBB-207ENST00000578649 LINC00959A0A1B0GUT2 108 aa8.22□□□□□ -1.09
UBB-207ENST00000578649 HSD52Q0P140 79 aa8.22□□□□□ -1.09
UBB-207ENST00000578649 CDKN2A-AS1Q9UH64 79 aa8.22□□□□□ -1.09
UBB-207ENST00000578649 PKHD1L1Q86WI1 4243 aa8.22□□□□□ -1.09
UBB-207ENST00000578649 OXTP01178 125 aa8.21□□□□□ -1.1
UBB-207ENST00000578649 SPINK8P0C7L1 97 aa8.21□□□□□ -1.1
UBB-207ENST00000578649 TAL2Q16559 108 aa8.21□□□□□ -1.1
UBB-207ENST00000578649 XP32Q5T750 250 aa8.21□□□□□ -1.1
UBB-207ENST00000578649 C2orf91Q6ZV80 131 aa8.21□□□□□ -1.1
UBB-207ENST00000578649 IGHV3-64A0A075B6Q5 118 aa8.2□□□□□ -1.1
UBB-207ENST00000578649 CIRBPQ14011 172 aaKnown RBP8.2□□□□□ -1.1
UBB-207ENST00000578649 BATFQ16520 125 aa8.2□□□□□ -1.1
UBB-207ENST00000578649 LINC01561Q8N1V8 128 aa8.2□□□□□ -1.1
UBB-207ENST00000578649 GAGE12HA6NDE8 117 aa8.19□□□□□ -1.1
UBB-207ENST00000578649 HINT1P49773 126 aaPredicted RBP8.19□□□□□ -1.1
UBB-207ENST00000578649 COX6A2Q02221 97 aa8.19□□□□□ -1.1
UBB-207ENST00000578649 C15orf56Q8N910 161 aa8.19□□□□□ -1.1
UBB-207ENST00000578649 SNHG12Q9BXW3 62 aa8.19□□□□□ -1.1
UBB-207ENST00000578649 TTTY13Q9BZ97 58 aa8.19□□□□□ -1.1
UBB-207ENST00000578649 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.18□□□□□ -1.1
UBB-207ENST00000578649 CHTF8P0CG12 524 aa8.18□□□□□ -1.1
UBB-207ENST00000578649 HIST1H4GQ99525 98 aa8.18□□□□□ -1.1
UBB-207ENST00000578649 NDUFA12Q9UI09 145 aa8.18□□□□□ -1.1
UBB-207ENST00000578649 A0A087WZ39 114 aa8.17□□□□□ -1.1
UBB-207ENST00000578649 IGLV5-39A0A0G2JS06 123 aa8.17□□□□□ -1.1
UBB-207ENST00000578649 A6NDN8 102 aa8.17□□□□□ -1.1
UBB-207ENST00000578649 SMIM1B2RUZ4 78 aa8.17□□□□□ -1.1
UBB-207ENST00000578649 TMEM238C9JI98 176 aa8.17□□□□□ -1.1
UBB-207ENST00000578649 SRSF9Q13242 221 aaKnown RBP eCLIP8.17□□□□□ -1.1
UBB-207ENST00000578649 COL5A1-AS1Q5SY13 56 aa8.17□□□□□ -1.1
UBB-207ENST00000578649 SERTAD4-AS1Q5TG53 156 aa8.17□□□□□ -1.1
UBB-207ENST00000578649 SFTA2Q6UW10 78 aa8.17□□□□□ -1.1
UBB-207ENST00000578649 CD164L2Q6UWJ8 174 aa8.17□□□□□ -1.1
UBB-207ENST00000578649 CHCHD10Q8WYQ3 142 aaPredicted RBP8.17□□□□□ -1.1
UBB-207ENST00000578649 DPH3Q96FX2 82 aa8.17□□□□□ -1.1
UBB-207ENST00000578649 TP73-AS1Q9UF72 201 aa8.17□□□□□ -1.1
UBB-207ENST00000578649 A0A087WYN8 130 aa8.16□□□□□ -1.1
UBB-207ENST00000578649 IGHV3OR16-9A0A0B4J2B5 98 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms