RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 ASPMQ8IZT6 3477 aa2.09□□□□□ -2.08
SMCHD1-203ENST00000577880 RAI1Q7Z5J4 1906 aaPredicted RBP2.09□□□□□ -2.08
SMCHD1-203ENST00000577880 UNQ6190/PRO20217Q6UXQ8 127 aa2.09□□□□□ -2.08
SMCHD1-203ENST00000577880 RNASE8Q8TDE3 154 aaKnown RBP2.09□□□□□ -2.08
SMCHD1-203ENST00000577880 LRP4O75096 1905 aa2.08□□□□□ -2.08
SMCHD1-203ENST00000577880 PTPRSQ13332 1948 aa2.08□□□□□ -2.08
SMCHD1-203ENST00000577880 TEX49A0A1B0GTD5 131 aa2.08□□□□□ -2.08
SMCHD1-203ENST00000577880 ZNF73O43830 326 aaPredicted RBP2.08□□□□□ -2.08
SMCHD1-203ENST00000577880 CCKP06307 115 aa2.08□□□□□ -2.08
SMCHD1-203ENST00000577880 ACYP1P07311 99 aa2.08□□□□□ -2.08
SMCHD1-203ENST00000577880 MRPS36P82909 103 aaKnown RBP2.08□□□□□ -2.08
SMCHD1-203ENST00000577880 ESRGQ1W209 222 aa2.08□□□□□ -2.08
SMCHD1-203ENST00000577880 MRPL55Q7Z7F7 128 aaKnown RBP2.08□□□□□ -2.08
SMCHD1-203ENST00000577880 TRBV27A0A0K0K1C4 114 aa2.08□□□□□ -2.08
SMCHD1-203ENST00000577880 NDUFC2-KCTD14E9PQ53 114 aa2.08□□□□□ -2.08
SMCHD1-203ENST00000577880 BRWD1-AS2P59051 145 aa2.08□□□□□ -2.08
SMCHD1-203ENST00000577880 KIF25-AS1Q9Y6Z4 181 aa2.08□□□□□ -2.08
SMCHD1-203ENST00000577880 KIAA1549LQ6ZVL6 1849 aa2.08□□□□□ -2.08
SMCHD1-203ENST00000577880 TANC2Q9HCD6 1990 aa2.08□□□□□ -2.08
SMCHD1-203ENST00000577880 WDFY4Q6ZS81 3184 aa2.08□□□□□ -2.08
SMCHD1-203ENST00000577880 C5orf47Q569G3 176 aa2.08□□□□□ -2.08
SMCHD1-203ENST00000577880 SPACA4Q8TDM5 124 aa2.08□□□□□ -2.08
SMCHD1-203ENST00000577880 CDC42SE2Q9NRR3 84 aa2.08□□□□□ -2.08
SMCHD1-203ENST00000577880 CELA1Q9UNI1 258 aa2.08□□□□□ -2.08
SMCHD1-203ENST00000577880 ZNF106Q9H2Y7 1883 aaKnown RBP2.08□□□□□ -2.08
SMCHD1-203ENST00000577880 RNASE3P12724 160 aaKnown RBP2.08□□□□□ -2.08
SMCHD1-203ENST00000577880 A0A1B0GUV1 79 aa2.07□□□□□ -2.08
SMCHD1-203ENST00000577880 COLCA2A8K830 154 aa2.07□□□□□ -2.08
SMCHD1-203ENST00000577880 RNF185Q96GF1 192 aa2.07□□□□□ -2.08
SMCHD1-203ENST00000577880 X6R8D5 127 aa2.07□□□□□ -2.08
SMCHD1-203ENST00000577880 NUP210LQ5VU65 1888 aa2.07□□□□□ -2.08
SMCHD1-203ENST00000577880 A0A0J9YXY3 114 aa2.07□□□□□ -2.08
SMCHD1-203ENST00000577880 A0A1B0GXF2 115 aa2.07□□□□□ -2.08
SMCHD1-203ENST00000577880 Q6ZQY7 126 aa2.07□□□□□ -2.08
SMCHD1-203ENST00000577880 RELNP78509 3460 aa2.07□□□□□ -2.08
SMCHD1-203ENST00000577880 CHD7Q9P2D1 2997 aa2.07□□□□□ -2.08
SMCHD1-203ENST00000577880 Q8N9L7 120 aa2.07□□□□□ -2.08
SMCHD1-203ENST00000577880 NUPR1O60356 82 aa2.07□□□□□ -2.08
SMCHD1-203ENST00000577880 ZNF22P17026 224 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-203ENST00000577880 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-203ENST00000577880 ATP11AUNQ6ZP68 121 aa2.07□□□□□ -2.08
SMCHD1-203ENST00000577880 SMIM20Q8N5G0 67 aa2.07□□□□□ -2.08
SMCHD1-203ENST00000577880 Q9BRP9 147 aa2.07□□□□□ -2.08
SMCHD1-203ENST00000577880 DMXL1Q9Y485 3027 aa2.07□□□□□ -2.08
SMCHD1-203ENST00000577880 A0A0B4J2C4 111 aa2.06□□□□□ -2.08
SMCHD1-203ENST00000577880 LINC00308Q8TCZ7 52 aa2.06□□□□□ -2.08
SMCHD1-203ENST00000577880 F8W1H4 67 aa2.06□□□□□ -2.08
SMCHD1-203ENST00000577880 TSHBP01222 138 aa2.06□□□□□ -2.08
SMCHD1-203ENST00000577880 EIF4EBP1Q13541 118 aaPredicted RBP2.06□□□□□ -2.08
SMCHD1-203ENST00000577880 AKAP9Q99996 3911 aa2.06□□□□□ -2.08
SMCHD1-203ENST00000577880 C9orf118A6NHY6 69 aa2.06□□□□□ -2.08
SMCHD1-203ENST00000577880 WFDC13Q8IUB5 93 aa2.06□□□□□ -2.08
SMCHD1-203ENST00000577880 C3orf22Q8N5N4 141 aa2.06□□□□□ -2.08
SMCHD1-203ENST00000577880 C11orf1Q9H5F2 150 aa2.06□□□□□ -2.08
SMCHD1-203ENST00000577880 LINC00588Q9Y4M8 146 aa2.06□□□□□ -2.08
SMCHD1-203ENST00000577880 A0A0U1RQV1 116 aa2.06□□□□□ -2.08
SMCHD1-203ENST00000577880 SMR3BP02814 79 aaPredicted RBP2.06□□□□□ -2.08
SMCHD1-203ENST00000577880 ADCYAP1P18509 176 aa2.06□□□□□ -2.08
SMCHD1-203ENST00000577880 ETDBQ3ZM63 59 aa2.06□□□□□ -2.08
SMCHD1-203ENST00000577880 PRR9Q5T870 116 aa2.06□□□□□ -2.08
SMCHD1-203ENST00000577880 IGHV6-1A0A0B4J1U7 121 aa2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 H3BT86 120 aa2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 FAM19A3Q7Z5A8 133 aa2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 MUC22E2RYF6 1773 aaPredicted RBP2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 DNAH12Q6ZR08 3092 aa2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 NOTCH1P46531 2555 aa2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 AGRNO00468 2067 aa2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 IGLV4-60A0A075B6I1 120 aa2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 IGKV3D-7A0A0C4DH55 119 aa2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 TMEM223A0PJW6 202 aa2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 J3KT08 172 aa2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 POLR2KP53803 58 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 Q6ZRU5 148 aa2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 MRPL52Q86TS9 123 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 SMCR5Q8TEV8 140 aa2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 PTH2Q96A98 100 aa2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 PRR15LQ9BU68 103 aa2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 C22orf24Q9Y442 160 aa2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 NRACQ8N912 160 aa2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 NBEAQ8NFP9 2946 aa2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 TNRC6BQ9UPQ9 1833 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 K7ERJ3 54 aa2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 TIMM17BO60830 172 aa2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 PRLHP81277 87 aa2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 SPAG11AQ6PDA7 123 aa2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 LINC01561Q8N1V8 128 aa2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 CLEC2BQ92478 149 aa2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 CSDC2Q9Y534 153 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-203ENST00000577880 TRBV10-3A0A0K0K1G6 114 aa2.04□□□□□ -2.08
SMCHD1-203ENST00000577880 NDUFV3P56181 108 aaKnown RBP2.04□□□□□ -2.08
SMCHD1-203ENST00000577880 Q8NAQ8 132 aa2.04□□□□□ -2.08
SMCHD1-203ENST00000577880 HIGD1BQ9P298 99 aa2.04□□□□□ -2.08
SMCHD1-203ENST00000577880 GCN1Q92616 2671 aaKnown RBP2.04□□□□□ -2.08
SMCHD1-203ENST00000577880 WDR87Q6ZQQ6 2873 aa2.04□□□□□ -2.08
SMCHD1-203ENST00000577880 KRTAP10-11P60412 298 aa2.04□□□□□ -2.08
SMCHD1-203ENST00000577880 LINC00242Q5T6M2 205 aa2.04□□□□□ -2.08
SMCHD1-203ENST00000577880 Q6ZPA2 131 aa2.04□□□□□ -2.08
SMCHD1-203ENST00000577880 LINC00476Q8WZB0 136 aa2.04□□□□□ -2.08
SMCHD1-203ENST00000577880 TM2D3Q9BRN9 247 aa2.04□□□□□ -2.08
SMCHD1-203ENST00000577880 C19orf73Q9NVV2 129 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms