RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 NTN5Q8WTR8 489 aaPredicted RBP7.27□□□□□ -1.25
CDK5RAP3-204ENST00000577664 CNBPP62633 177 aaKnown RBP7.26□□□□□ -1.25
CDK5RAP3-204ENST00000577664 PYY3Q5JQD4 70 aa7.26□□□□□ -1.25
CDK5RAP3-204ENST00000577664 LEPROTO15243 131 aa7.25□□□□□ -1.25
CDK5RAP3-204ENST00000577664 SCGB1D1O95968 90 aa7.25□□□□□ -1.25
CDK5RAP3-204ENST00000577664 SLPIP03973 132 aa7.25□□□□□ -1.25
CDK5RAP3-204ENST00000577664 SPINK8P0C7L1 97 aa7.25□□□□□ -1.25
CDK5RAP3-204ENST00000577664 CXCL5P42830 114 aa7.25□□□□□ -1.25
CDK5RAP3-204ENST00000577664 RNF151Q2KHN1 245 aa7.25□□□□□ -1.25
CDK5RAP3-204ENST00000577664 SFTA2Q6UW10 78 aa7.25□□□□□ -1.25
CDK5RAP3-204ENST00000577664 ORAOV1Q8WV07 137 aa7.25□□□□□ -1.25
CDK5RAP3-204ENST00000577664 J3QL48 77 aa7.24□□□□□ -1.25
CDK5RAP3-204ENST00000577664 ZNF561-AS1K7EIQ3 104 aa7.24□□□□□ -1.25
CDK5RAP3-204ENST00000577664 HERVK_113P61574 105 aa7.24□□□□□ -1.25
CDK5RAP3-204ENST00000577664 C6orf226Q5I0X4 101 aa7.24□□□□□ -1.25
CDK5RAP3-204ENST00000577664 STPG4Q8N801 248 aa7.24□□□□□ -1.25
CDK5RAP3-204ENST00000577664 COX7B2Q8TF08 81 aa7.24□□□□□ -1.25
CDK5RAP3-204ENST00000577664 PLEKHB2Q96CS7 222 aa7.24□□□□□ -1.25
CDK5RAP3-204ENST00000577664 PGPEP1Q9NXJ5 209 aa7.24□□□□□ -1.25
CDK5RAP3-204ENST00000577664 EREGO14944 169 aa7.23□□□□□ -1.25
CDK5RAP3-204ENST00000577664 SPAG11BQ08648 103 aa7.23□□□□□ -1.25
CDK5RAP3-204ENST00000577664 hDV102S1A0JD36 115 aa7.22□□□□□ -1.25
CDK5RAP3-204ENST00000577664 LECT2O14960 151 aa7.22□□□□□ -1.25
CDK5RAP3-204ENST00000577664 PRSS2P07478 247 aa7.22□□□□□ -1.25
CDK5RAP3-204ENST00000577664 NMUP48645 174 aa7.22□□□□□ -1.25
CDK5RAP3-204ENST00000577664 ZNF625Q96I27 306 aaPredicted RBP7.22□□□□□ -1.25
CDK5RAP3-204ENST00000577664 RNF213Q63HN8 5207 aa7.22□□□□□ -1.25
CDK5RAP3-204ENST00000577664 TRBV30A0A0K0K1B3 111 aa7.21□□□□□ -1.26
CDK5RAP3-204ENST00000577664 J3QQQ9 107 aa7.21□□□□□ -1.26
CDK5RAP3-204ENST00000577664 HIGD2BQ4VC39 106 aa7.21□□□□□ -1.26
CDK5RAP3-204ENST00000577664 ANKRD39Q53RE8 183 aa7.21□□□□□ -1.26
CDK5RAP3-204ENST00000577664 Q5VSD8 79 aa7.21□□□□□ -1.26
CDK5RAP3-204ENST00000577664 CDPF1Q6NVV7 123 aa7.21□□□□□ -1.26
CDK5RAP3-204ENST00000577664 ATOH7Q8N100 152 aa7.21□□□□□ -1.26
CDK5RAP3-204ENST00000577664 C9orf163Q8N9P6 203 aa7.21□□□□□ -1.26
CDK5RAP3-204ENST00000577664 IGKV2D-26A0A0A0MRZ7 120 aa7.2□□□□□ -1.26
CDK5RAP3-204ENST00000577664 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.2□□□□□ -1.26
CDK5RAP3-204ENST00000577664 NDUFA1O15239 70 aa7.2□□□□□ -1.26
CDK5RAP3-204ENST00000577664 CKS1BP61024 79 aa7.2□□□□□ -1.26
CDK5RAP3-204ENST00000577664 HERV-K104P63124 156 aa7.2□□□□□ -1.26
CDK5RAP3-204ENST00000577664 SYCNQ0VAF6 134 aa7.2□□□□□ -1.26
CDK5RAP3-204ENST00000577664 UNQ6190/PRO20217Q6UXQ8 127 aa7.2□□□□□ -1.26
CDK5RAP3-204ENST00000577664 HSBP1L1C9JCN9 74 aa7.19□□□□□ -1.26
CDK5RAP3-204ENST00000577664 TLX1NBP0CAT3 122 aa7.19□□□□□ -1.26
CDK5RAP3-204ENST00000577664 TSPEAR-AS2P59090 65 aa7.19□□□□□ -1.26
CDK5RAP3-204ENST00000577664 COX17Q14061 63 aa7.19□□□□□ -1.26
CDK5RAP3-204ENST00000577664 MAJINQ3KP22 176 aa7.19□□□□□ -1.26
CDK5RAP3-204ENST00000577664 Q6ZRU5 148 aa7.19□□□□□ -1.26
CDK5RAP3-204ENST00000577664 CAMK2N2Q96S95 79 aa7.19□□□□□ -1.26
CDK5RAP3-204ENST00000577664 TOMM7Q9P0U1 55 aa7.19□□□□□ -1.26
CDK5RAP3-204ENST00000577664 MYMXA0A1B0GTQ4 84 aa7.18□□□□□ -1.26
CDK5RAP3-204ENST00000577664 SMIM6P0DI80 62 aa7.18□□□□□ -1.26
CDK5RAP3-204ENST00000577664 C10orf25Q5T742 122 aa7.18□□□□□ -1.26
CDK5RAP3-204ENST00000577664 C2orf82Q6UX34 121 aa7.18□□□□□ -1.26
CDK5RAP3-204ENST00000577664 LINC00526Q96FQ7 95 aa7.18□□□□□ -1.26
CDK5RAP3-204ENST00000577664 C6orf48Q9UBA6 75 aa7.18□□□□□ -1.26
CDK5RAP3-204ENST00000577664 NDUFA12Q9UI09 145 aa7.18□□□□□ -1.26
CDK5RAP3-204ENST00000577664 PLA2G2DQ9UNK4 145 aa7.18□□□□□ -1.26
CDK5RAP3-204ENST00000577664 LINC00587B1AMM8 73 aa7.17□□□□□ -1.26
CDK5RAP3-204ENST00000577664 DLEU1O43261 78 aa7.17□□□□□ -1.26
CDK5RAP3-204ENST00000577664 LGALS3P17931 250 aaKnown RBP7.17□□□□□ -1.26
CDK5RAP3-204ENST00000577664 KRTAP10-2P60368 255 aa7.17□□□□□ -1.26
CDK5RAP3-204ENST00000577664 SDIM1Q6ZPB5 146 aa7.17□□□□□ -1.26
CDK5RAP3-204ENST00000577664 CARD19Q96LW7 228 aa7.17□□□□□ -1.26
CDK5RAP3-204ENST00000577664 KRTAP9-2Q9BYQ4 174 aa7.17□□□□□ -1.26
CDK5RAP3-204ENST00000577664 KRTAP9-6A0A140TA67 174 aa7.16□□□□□ -1.26
CDK5RAP3-204ENST00000577664 KRTAP29-1A8MX34 341 aaPredicted RBP7.16□□□□□ -1.26
CDK5RAP3-204ENST00000577664 VAMP8Q9BV40 100 aa7.16□□□□□ -1.26
CDK5RAP3-204ENST00000577664 PKIGQ9Y2B9 76 aa7.16□□□□□ -1.26
CDK5RAP3-204ENST00000577664 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.15□□□□□ -1.26
CDK5RAP3-204ENST00000577664 COX8AP10176 69 aa7.15□□□□□ -1.26
CDK5RAP3-204ENST00000577664 BOD1L2Q8IYS8 172 aa7.15□□□□□ -1.26
CDK5RAP3-204ENST00000577664 DNAH8Q96JB1 4490 aa7.15□□□□□ -1.27
CDK5RAP3-204ENST00000577664 IGLV5-52A0A0A0MRZ9 124 aa7.14□□□□□ -1.27
CDK5RAP3-204ENST00000577664 NDUFC2-KCTD14E9PQ53 114 aa7.14□□□□□ -1.27
CDK5RAP3-204ENST00000577664 TIMM17BO60830 172 aa7.14□□□□□ -1.27
CDK5RAP3-204ENST00000577664 SPATA45Q537H7 98 aa7.14□□□□□ -1.27
CDK5RAP3-204ENST00000577664 PCP2Q8IVA1 136 aa7.14□□□□□ -1.27
CDK5RAP3-204ENST00000577664 LOC107984156A0A0G2JMH3 177 aa7.13□□□□□ -1.27
CDK5RAP3-204ENST00000577664 A0A0J9YXY3 114 aa7.13□□□□□ -1.27
CDK5RAP3-204ENST00000577664 LOC107984640A0A0U1RRK4 108 aa7.13□□□□□ -1.27
CDK5RAP3-204ENST00000577664 ZNF815PA8K554 130 aa7.13□□□□□ -1.27
CDK5RAP3-204ENST00000577664 XGP55808 180 aa7.13□□□□□ -1.27
CDK5RAP3-204ENST00000577664 S100A12P80511 92 aa7.13□□□□□ -1.27
CDK5RAP3-204ENST00000577664 CIRBPQ14011 172 aaKnown RBP7.13□□□□□ -1.27
CDK5RAP3-204ENST00000577664 ARL17AQ8IVW1 177 aa7.13□□□□□ -1.27
CDK5RAP3-204ENST00000577664 ERG28Q9UKR5 140 aa7.13□□□□□ -1.27
CDK5RAP3-204ENST00000577664 PAM16Q9Y3D7 125 aa7.13□□□□□ -1.27
CDK5RAP3-204ENST00000577664 GCSHP23434 173 aa7.12□□□□□ -1.27
CDK5RAP3-204ENST00000577664 PTTG1IPP53801 180 aa7.12□□□□□ -1.27
CDK5RAP3-204ENST00000577664 C9orf116Q5BN46 136 aaPredicted RBP7.12□□□□□ -1.27
CDK5RAP3-204ENST00000577664 LITAFQ99732 161 aa7.12□□□□□ -1.27
CDK5RAP3-204ENST00000577664 TTTY13Q9BZ97 58 aa7.12□□□□□ -1.27
CDK5RAP3-204ENST00000577664 PPDPFQ9H3Y8 114 aa7.12□□□□□ -1.27
CDK5RAP3-204ENST00000577664 Q6ZRP5 223 aa7.11□□□□□ -1.27
CDK5RAP3-204ENST00000577664 Q6ZSA8 131 aa7.11□□□□□ -1.27
CDK5RAP3-204ENST00000577664 LINC00474Q9P2X8 69 aa7.11□□□□□ -1.27
CDK5RAP3-204ENST00000577664 Q6ZVH6 145 aa7.1□□□□□ -1.27
CDK5RAP3-204ENST00000577664 LINC00518Q8N0U6 118 aa7.1□□□□□ -1.27
CDK5RAP3-204ENST00000577664 HIGD1BQ9P298 99 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms