RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 UBE2D4Q9Y2X8 147 aa2.9□□□□□ -1.95
BRIP1-202ENST00000577598 COL24A1Q17RW2 1714 aa2.9□□□□□ -1.95
BRIP1-202ENST00000577598 LRRC37A3O60309 1634 aa2.9□□□□□ -1.95
BRIP1-202ENST00000577598 LTBP4Q8N2S1 1624 aa2.9□□□□□ -1.95
BRIP1-202ENST00000577598 SLIT3O75094 1523 aa2.9□□□□□ -1.95
BRIP1-202ENST00000577598 H0Y9P7 68 aa2.9□□□□□ -1.95
BRIP1-202ENST00000577598 MEGF6O75095 1541 aa2.9□□□□□ -1.95
BRIP1-202ENST00000577598 CAV3P56539 151 aa2.89□□□□□ -1.95
BRIP1-202ENST00000577598 UBL5Q9BZL1 73 aa2.89□□□□□ -1.95
BRIP1-202ENST00000577598 SPINK14Q6IE38 97 aa2.89□□□□□ -1.95
BRIP1-202ENST00000577598 CSPG4Q6UVK1 2322 aa2.89□□□□□ -1.95
BRIP1-202ENST00000577598 NRXN3Q9Y4C0 1643 aa2.89□□□□□ -1.95
BRIP1-202ENST00000577598 BDP1A6H8Y1 2624 aa2.89□□□□□ -1.95
BRIP1-202ENST00000577598 ZNF831Q5JPB2 1677 aa2.88□□□□□ -1.95
BRIP1-202ENST00000577598 COL27A1Q8IZC6 1860 aaPredicted RBP2.88□□□□□ -1.95
BRIP1-202ENST00000577598 C10orf55Q5SWW7 151 aa2.88□□□□□ -1.95
BRIP1-202ENST00000577598 KRTAP9-4Q9BYQ2 154 aa2.88□□□□□ -1.95
BRIP1-202ENST00000577598 PSORS1C2Q9UIG4 136 aa2.88□□□□□ -1.95
BRIP1-202ENST00000577598 FMN2Q9NZ56 1722 aa2.88□□□□□ -1.95
BRIP1-202ENST00000577598 SMIM4Q8WVI0 70 aa2.87□□□□□ -1.95
BRIP1-202ENST00000577598 ZNF292O60281 2723 aa2.87□□□□□ -1.95
BRIP1-202ENST00000577598 A0A087WSZ3 146 aa2.87□□□□□ -1.95
BRIP1-202ENST00000577598 STRCQ7RTU9 1775 aa2.87□□□□□ -1.95
BRIP1-202ENST00000577598 GLI3P10071 1580 aa2.86□□□□□ -1.95
BRIP1-202ENST00000577598 ZNF563Q8TA94 476 aa2.86□□□□□ -1.95
BRIP1-202ENST00000577598 LAMB1P07942 1786 aa2.86□□□□□ -1.95
BRIP1-202ENST00000577598 HELZ2Q9BYK8 2649 aaKnown RBP2.86□□□□□ -1.95
BRIP1-202ENST00000577598 DDX60Q8IY21 1712 aaKnown RBP2.85□□□□□ -1.95
BRIP1-202ENST00000577598 MUC6Q6W4X9 2439 aa2.85□□□□□ -1.95
BRIP1-202ENST00000577598 HIVEP2P31629 2446 aa2.85□□□□□ -1.95
BRIP1-202ENST00000577598 NDUFA11Q86Y39 141 aa2.85□□□□□ -1.95
BRIP1-202ENST00000577598 LMO7Q8WWI1 1683 aa2.85□□□□□ -1.95
BRIP1-202ENST00000577598 KRTAP9-6A0A140TA67 174 aa2.85□□□□□ -1.95
BRIP1-202ENST00000577598 KRTAP9-7A8MTY7 169 aa2.85□□□□□ -1.95
BRIP1-202ENST00000577598 WFDC6Q9BQY6 131 aa2.85□□□□□ -1.95
BRIP1-202ENST00000577598 M0R1W7 72 aa2.84□□□□□ -1.95
BRIP1-202ENST00000577598 Q96NJ1 140 aa2.84□□□□□ -1.95
BRIP1-202ENST00000577598 PSME4Q14997 1843 aa2.84□□□□□ -1.95
BRIP1-202ENST00000577598 PARP4Q9UKK3 1724 aaKnown RBP2.84□□□□□ -1.95
BRIP1-202ENST00000577598 PLCH1Q4KWH8 1693 aa2.84□□□□□ -1.95
BRIP1-202ENST00000577598 ATRQ13535 2644 aa2.84□□□□□ -1.96
BRIP1-202ENST00000577598 KDM3BQ7LBC6 1761 aa2.83□□□□□ -1.96
BRIP1-202ENST00000577598 PARP14Q460N5 1801 aa2.83□□□□□ -1.96
BRIP1-202ENST00000577598 DOCK2Q92608 1830 aa2.83□□□□□ -1.96
BRIP1-202ENST00000577598 SIPA1L3O60292 1781 aaPredicted RBP2.83□□□□□ -1.96
BRIP1-202ENST00000577598 SCN4AP35499 1836 aa2.83□□□□□ -1.96
BRIP1-202ENST00000577598 ALS2Q96Q42 1657 aa2.83□□□□□ -1.96
BRIP1-202ENST00000577598 Q6ZRN7 208 aaPredicted RBP2.83□□□□□ -1.96
BRIP1-202ENST00000577598 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.83□□□□□ -1.96
BRIP1-202ENST00000577598 AHDC1Q5TGY3 1603 aaPredicted RBP2.83□□□□□ -1.96
BRIP1-202ENST00000577598 ABCA3Q99758 1704 aa2.83□□□□□ -1.96
BRIP1-202ENST00000577598 FAM186AA6NE01 2351 aa2.83□□□□□ -1.96
BRIP1-202ENST00000577598 KIAA1551Q9HCM1 1747 aa2.82□□□□□ -1.96
BRIP1-202ENST00000577598 RREB1Q92766 1687 aa2.82□□□□□ -1.96
BRIP1-202ENST00000577598 TMEM263Q8WUH6 116 aaKnown RBP2.82□□□□□ -1.96
BRIP1-202ENST00000577598 LAMA4Q16363 1823 aa2.81□□□□□ -1.96
BRIP1-202ENST00000577598 CELSR2Q9HCU4 2923 aa2.81□□□□□ -1.96
BRIP1-202ENST00000577598 LRP6O75581 1613 aa2.81□□□□□ -1.96
BRIP1-202ENST00000577598 PIK3C2AO00443 1686 aa2.81□□□□□ -1.96
BRIP1-202ENST00000577598 LTBP2Q14767 1821 aa2.81□□□□□ -1.96
BRIP1-202ENST00000577598 SLX4Q8IY92 1834 aa2.81□□□□□ -1.96
BRIP1-202ENST00000577598 Q6ZRX8 168 aa2.81□□□□□ -1.96
BRIP1-202ENST00000577598 CCDC168Q8NDH2 2452 aa2.81□□□□□ -1.96
BRIP1-202ENST00000577598 QSER1Q2KHR3 1735 aa2.81□□□□□ -1.96
BRIP1-202ENST00000577598 PAPPAQ13219 1627 aa2.81□□□□□ -1.96
BRIP1-202ENST00000577598 NHSL1Q5SYE7 1610 aa2.81□□□□□ -1.96
BRIP1-202ENST00000577598 KIAA1549LQ6ZVL6 1849 aa2.81□□□□□ -1.96
BRIP1-202ENST00000577598 RGPD3A6NKT7 1758 aaPredicted RBP2.8□□□□□ -1.96
BRIP1-202ENST00000577598 RGPD4Q7Z3J3 1758 aa2.8□□□□□ -1.96
BRIP1-202ENST00000577598 PRR34Q9NV39 138 aa2.8□□□□□ -1.96
BRIP1-202ENST00000577598 NWD2Q9ULI1 1742 aa2.8□□□□□ -1.96
BRIP1-202ENST00000577598 A0A087WTM6 91 aa2.8□□□□□ -1.96
BRIP1-202ENST00000577598 LCE5AQ5TCM9 118 aa2.8□□□□□ -1.96
BRIP1-202ENST00000577598 LINC00846Q9NV44 126 aa2.8□□□□□ -1.96
BRIP1-202ENST00000577598 UBE2DNLQ8IWF7 75 aa2.8□□□□□ -1.96
BRIP1-202ENST00000577598 ATP5EP2Q5VTU8 51 aa2.79□□□□□ -1.96
BRIP1-202ENST00000577598 ABRACLQ9P1F3 81 aa2.79□□□□□ -1.96
BRIP1-202ENST00000577598 COL4A2P08572 1712 aa2.79□□□□□ -1.96
BRIP1-202ENST00000577598 RGPD8O14715 1765 aaPredicted RBP2.79□□□□□ -1.96
BRIP1-202ENST00000577598 PDCD11Q14690 1871 aaKnown RBP2.79□□□□□ -1.96
BRIP1-202ENST00000577598 POLQO75417 2590 aa2.79□□□□□ -1.96
BRIP1-202ENST00000577598 PTPN13Q12923 2485 aa2.78□□□□□ -1.96
BRIP1-202ENST00000577598 COL14A1Q05707 1796 aaKnown RBP2.78□□□□□ -1.96
BRIP1-202ENST00000577598 MUC22E2RYF6 1773 aaPredicted RBP2.78□□□□□ -1.96
BRIP1-202ENST00000577598 NDUFA4O00483 81 aa2.78□□□□□ -1.96
BRIP1-202ENST00000577598 BCE1O60756 84 aa2.78□□□□□ -1.96
BRIP1-202ENST00000577598 NDUFB1O75438 58 aa2.78□□□□□ -1.96
BRIP1-202ENST00000577598 LTN1O94822 1766 aa2.77□□□□□ -1.97
BRIP1-202ENST00000577598 FXYD6P3P58550 94 aa2.77□□□□□ -1.97
BRIP1-202ENST00000577598 LCE3CQ5T5A8 94 aa2.77□□□□□ -1.97
BRIP1-202ENST00000577598 LRRK2Q5S007 2527 aa2.77□□□□□ -1.97
BRIP1-202ENST00000577598 RGPD2P0DJD1 1756 aa2.76□□□□□ -1.97
BRIP1-202ENST00000577598 C4AP0C0L4 1744 aa2.76□□□□□ -1.97
BRIP1-202ENST00000577598 C4BP0C0L5 1744 aa2.76□□□□□ -1.97
BRIP1-202ENST00000577598 DMBT1Q9UGM3 2413 aaPredicted RBP2.76□□□□□ -1.97
BRIP1-202ENST00000577598 MYO16Q9Y6X6 1858 aa2.76□□□□□ -1.97
BRIP1-202ENST00000577598 DUOX1Q9NRD9 1551 aa2.76□□□□□ -1.97
BRIP1-202ENST00000577598 SNRPGP15A8MWD9 76 aa2.76□□□□□ -1.97
BRIP1-202ENST00000577598 PKD1L3Q7Z443 1732 aa2.76□□□□□ -1.97
BRIP1-202ENST00000577598 C5P01031 1676 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms