RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 TRGC2P03986 189 aa13□□□□□ -0.33
HCFC1R1-208ENST00000575214 TLX1NBP0CAT3 122 aa13□□□□□ -0.33
HCFC1R1-208ENST00000575214 PDZD11Q5EBL8 140 aa13□□□□□ -0.33
HCFC1R1-208ENST00000575214 CHCHD1Q96BP2 118 aaKnown RBP13□□□□□ -0.33
HCFC1R1-208ENST00000575214 MYCBP2O75592 4640 aa13□□□□□ -0.33
HCFC1R1-208ENST00000575214 IGLV5-45A0A087WSX0 123 aa12.99□□□□□ -0.33
HCFC1R1-208ENST00000575214 SMIM1B2RUZ4 78 aa12.99□□□□□ -0.33
HCFC1R1-208ENST00000575214 ATP5LO75964 103 aa12.99□□□□□ -0.33
HCFC1R1-208ENST00000575214 Q6ZRP5 223 aa12.99□□□□□ -0.33
HCFC1R1-208ENST00000575214 A0A1W2PNN7 141 aa12.98□□□□□ -0.33
HCFC1R1-208ENST00000575214 C9orf116Q5BN46 136 aaPredicted RBP12.98□□□□□ -0.33
HCFC1R1-208ENST00000575214 GAGE2EQ4V326 116 aa12.97□□□□□ -0.33
HCFC1R1-208ENST00000575214 BAGE3Q86Y29 109 aa12.97□□□□□ -0.33
HCFC1R1-208ENST00000575214 GAGE2DQ9UEU5 116 aa12.97□□□□□ -0.33
HCFC1R1-208ENST00000575214 SPINK8P0C7L1 97 aa12.96□□□□□ -0.33
HCFC1R1-208ENST00000575214 HNRNPA3P51991 378 aaKnown RBP12.96□□□□□ -0.33
HCFC1R1-208ENST00000575214 H3BRM9 83 aa12.95□□□□□ -0.34
HCFC1R1-208ENST00000575214 IGLC3P0DOY3 106 aa12.95□□□□□ -0.34
HCFC1R1-208ENST00000575214 NDUFC2-KCTD14E9PQ53 114 aa12.94□□□□□ -0.34
HCFC1R1-208ENST00000575214 CXCL5P42830 114 aa12.94□□□□□ -0.34
HCFC1R1-208ENST00000575214 COX7B2Q8TF08 81 aa12.94□□□□□ -0.34
HCFC1R1-208ENST00000575214 COLCA2A8K830 154 aa12.94□□□□□ -0.34
HCFC1R1-208ENST00000575214 F8VRH5 84 aa12.94□□□□□ -0.34
HCFC1R1-208ENST00000575214 HSBP1O75506 76 aa12.94□□□□□ -0.34
HCFC1R1-208ENST00000575214 PKHD1L1Q86WI1 4243 aa12.93□□□□□ -0.34
HCFC1R1-208ENST00000575214 J3QL48 77 aa12.92□□□□□ -0.34
HCFC1R1-208ENST00000575214 PRR3P79522 188 aaKnown RBP12.92□□□□□ -0.34
HCFC1R1-208ENST00000575214 HERC1Q15751 4861 aa12.92□□□□□ -0.34
HCFC1R1-208ENST00000575214 ZNF22P17026 224 aaPredicted RBP12.91□□□□□ -0.34
HCFC1R1-208ENST00000575214 FAM19A2Q8N3H0 131 aa12.91□□□□□ -0.34
HCFC1R1-208ENST00000575214 IFI27L1Q96BM0 104 aa12.91□□□□□ -0.34
HCFC1R1-208ENST00000575214 FAM168BA1KXE4 195 aa12.9□□□□□ -0.34
HCFC1R1-208ENST00000575214 FAM19A5Q7Z5A7 132 aaPredicted RBP12.9□□□□□ -0.34
HCFC1R1-208ENST00000575214 KRTAP29-1A8MX34 341 aaPredicted RBP12.89□□□□□ -0.35
HCFC1R1-208ENST00000575214 SCO1O75880 301 aa12.89□□□□□ -0.35
HCFC1R1-208ENST00000575214 PHF5AQ7RTV0 110 aaKnown RBP12.89□□□□□ -0.35
HCFC1R1-208ENST00000575214 CHTOPQ9Y3Y2 248 aaKnown RBP12.89□□□□□ -0.35
HCFC1R1-208ENST00000575214 C11orf86A6NJI1 115 aa12.88□□□□□ -0.35
HCFC1R1-208ENST00000575214 SERF1AO75920 110 aa12.88□□□□□ -0.35
HCFC1R1-208ENST00000575214 TMEM170BQ5T4T1 132 aa12.87□□□□□ -0.35
HCFC1R1-208ENST00000575214 C9orf129Q5T035 196 aaKnown RBP12.86□□□□□ -0.35
HCFC1R1-208ENST00000575214 TRAV12-1A0A0B4J245 112 aa12.85□□□□□ -0.35
HCFC1R1-208ENST00000575214 IGLV5-39A0A0G2JS06 123 aa12.85□□□□□ -0.35
HCFC1R1-208ENST00000575214 OXTP01178 125 aa12.85□□□□□ -0.35
HCFC1R1-208ENST00000575214 LINC00310P59036 64 aa12.85□□□□□ -0.35
HCFC1R1-208ENST00000575214 XAGE1AQ9HD64 81 aa12.84□□□□□ -0.35
HCFC1R1-208ENST00000575214 M0QXV9 152 aa12.83□□□□□ -0.36
HCFC1R1-208ENST00000575214 LEPROTL1O95214 131 aa12.82□□□□□ -0.36
HCFC1R1-208ENST00000575214 KRTAP7-1Q8IUC3 87 aa12.82□□□□□ -0.36
HCFC1R1-208ENST00000575214 LRP1Q07954 4544 aaKnown RBP12.82□□□□□ -0.36
HCFC1R1-208ENST00000575214 H0Y8G0 127 aa12.81□□□□□ -0.36
HCFC1R1-208ENST00000575214 PSORS1C2Q9UIG4 136 aa12.81□□□□□ -0.36
HCFC1R1-208ENST00000575214 FAT3Q8TDW7 4589 aa12.81□□□□□ -0.36
HCFC1R1-208ENST00000575214 NUPR1O60356 82 aa12.81□□□□□ -0.36
HCFC1R1-208ENST00000575214 UBE2BP63146 152 aa12.79□□□□□ -0.36
HCFC1R1-208ENST00000575214 FABP4P15090 132 aa12.78□□□□□ -0.36
HCFC1R1-208ENST00000575214 C1orf137Q5JT78 98 aa12.78□□□□□ -0.36
HCFC1R1-208ENST00000575214 SERTAD4-AS1Q5TG53 156 aa12.78□□□□□ -0.36
HCFC1R1-208ENST00000575214 HSPB8Q9UJY1 196 aa12.78□□□□□ -0.36
HCFC1R1-208ENST00000575214 TMEM223A0PJW6 202 aa12.76□□□□□ -0.37
HCFC1R1-208ENST00000575214 ODF1Q14990 250 aa12.76□□□□□ -0.37
HCFC1R1-208ENST00000575214 SPINK6Q6UWN8 80 aa12.76□□□□□ -0.37
HCFC1R1-208ENST00000575214 HIST1H2BKO60814 126 aa12.75□□□□□ -0.37
HCFC1R1-208ENST00000575214 HIST1H2BJP06899 126 aa12.75□□□□□ -0.37
HCFC1R1-208ENST00000575214 HIST1H2BOP23527 126 aa12.75□□□□□ -0.37
HCFC1R1-208ENST00000575214 HIST1H2BBP33778 126 aa12.75□□□□□ -0.37
HCFC1R1-208ENST00000575214 PFN2P35080 140 aa12.75□□□□□ -0.37
HCFC1R1-208ENST00000575214 HIST1H2BDP58876 126 aa12.75□□□□□ -0.37
HCFC1R1-208ENST00000575214 HIST1H2BCP62807 126 aa12.75□□□□□ -0.37
HCFC1R1-208ENST00000575214 HIST2H2BEQ16778 126 aa12.75□□□□□ -0.37
HCFC1R1-208ENST00000575214 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.75□□□□□ -0.37
HCFC1R1-208ENST00000575214 KRTAP11-1Q8IUC1 163 aa12.75□□□□□ -0.37
HCFC1R1-208ENST00000575214 HIST1H2BHQ93079 126 aa12.75□□□□□ -0.37
HCFC1R1-208ENST00000575214 ZNF625Q96I27 306 aaPredicted RBP12.75□□□□□ -0.37
HCFC1R1-208ENST00000575214 HIST1H2BNQ99877 126 aa12.75□□□□□ -0.37
HCFC1R1-208ENST00000575214 HIST1H2BMQ99879 126 aa12.75□□□□□ -0.37
HCFC1R1-208ENST00000575214 SFTA2Q6UW10 78 aa12.74□□□□□ -0.37
HCFC1R1-208ENST00000575214 ERG28Q9UKR5 140 aa12.74□□□□□ -0.37
HCFC1R1-208ENST00000575214 C22orf24Q9Y442 160 aa12.74□□□□□ -0.37
HCFC1R1-208ENST00000575214 SRSF9Q13242 221 aaKnown RBP eCLIP12.73□□□□□ -0.37
HCFC1R1-208ENST00000575214 LBHQ53QV2 105 aaPredicted RBP12.71□□□□□ -0.37
HCFC1R1-208ENST00000575214 IGLV7-43P04211 117 aa12.69□□□□□ -0.38
HCFC1R1-208ENST00000575214 PLNP26678 52 aa12.69□□□□□ -0.38
HCFC1R1-208ENST00000575214 COX17Q14061 63 aa12.69□□□□□ -0.38
HCFC1R1-208ENST00000575214 REG3GQ6UW15 175 aa12.69□□□□□ -0.38
HCFC1R1-208ENST00000575214 MRPL55Q7Z7F7 128 aaKnown RBP12.69□□□□□ -0.38
HCFC1R1-208ENST00000575214 TP73-AS1Q9UF72 201 aa12.69□□□□□ -0.38
HCFC1R1-208ENST00000575214 PMCHL2Q9BQD1 86 aa12.69□□□□□ -0.38
HCFC1R1-208ENST00000575214 MAP1LC3CQ9BXW4 147 aa12.69□□□□□ -0.38
HCFC1R1-208ENST00000575214 PLA2G2DQ9UNK4 145 aa12.69□□□□□ -0.38
HCFC1R1-208ENST00000575214 DPM2O94777 84 aa12.67□□□□□ -0.38
HCFC1R1-208ENST00000575214 NKAPP1Q8N9T2 125 aa12.67□□□□□ -0.38
HCFC1R1-208ENST00000575214 SND1-IT1Q9HBX3 110 aa12.67□□□□□ -0.38
HCFC1R1-208ENST00000575214 MT1HL1P0DM35 61 aa12.66□□□□□ -0.38
HCFC1R1-208ENST00000575214 IGKCP01834 107 aa12.65□□□□□ -0.38
HCFC1R1-208ENST00000575214 LINC00158P58513 81 aa12.65□□□□□ -0.38
HCFC1R1-208ENST00000575214 IGLV5-37A0A075B6J1 123 aa12.64□□□□□ -0.39
HCFC1R1-208ENST00000575214 GAGE10A6NGK3 116 aa12.64□□□□□ -0.39
HCFC1R1-208ENST00000575214 LINC01600Q96MT4 127 aa12.64□□□□□ -0.39
HCFC1R1-208ENST00000575214 LINC00167Q96N53 147 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms