RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 KIAA0087Q14695 138 aa5.56□□□□□ -1.52
NPLOC4-210ENST00000572824 C9orf129Q5T035 196 aaKnown RBP5.56□□□□□ -1.52
NPLOC4-210ENST00000572824 LCE1AQ5T7P2 110 aa5.56□□□□□ -1.52
NPLOC4-210ENST00000572824 LINC00173Q6ZV60 143 aa5.56□□□□□ -1.52
NPLOC4-210ENST00000572824 LINC00862A6NCI5 91 aa5.55□□□□□ -1.52
NPLOC4-210ENST00000572824 PPP1R2P9O14990 202 aa5.55□□□□□ -1.52
NPLOC4-210ENST00000572824 IGLV7-43P04211 117 aa5.55□□□□□ -1.52
NPLOC4-210ENST00000572824 RPL32P62910 135 aaKnown RBP5.55□□□□□ -1.52
NPLOC4-210ENST00000572824 HBBP68871 147 aa5.55□□□□□ -1.52
NPLOC4-210ENST00000572824 LINC00242Q5T6M2 205 aa5.55□□□□□ -1.52
NPLOC4-210ENST00000572824 C20orf78Q9BR46 151 aa5.55□□□□□ -1.52
NPLOC4-210ENST00000572824 MRPL35Q9NZE8 188 aaKnown RBP5.55□□□□□ -1.52
NPLOC4-210ENST00000572824 A0A087WZ39 114 aa5.54□□□□□ -1.52
NPLOC4-210ENST00000572824 LOC389332A0A1B0GUA5 103 aa5.54□□□□□ -1.52
NPLOC4-210ENST00000572824 NDUFA1O15239 70 aa5.54□□□□□ -1.52
NPLOC4-210ENST00000572824 OR10D4PQ8NGN7 298 aa5.54□□□□□ -1.52
NPLOC4-210ENST00000572824 SMDT1Q9H4I9 107 aa5.54□□□□□ -1.52
NPLOC4-210ENST00000572824 SPANXA1Q9NS26 97 aa5.54□□□□□ -1.52
NPLOC4-210ENST00000572824 M0QXV9 152 aa5.53□□□□□ -1.52
NPLOC4-210ENST00000572824 S100A6P06703 90 aa5.53□□□□□ -1.52
NPLOC4-210ENST00000572824 MRPS36P82909 103 aaKnown RBP5.53□□□□□ -1.52
NPLOC4-210ENST00000572824 LINC00518Q8N0U6 118 aa5.53□□□□□ -1.52
NPLOC4-210ENST00000572824 PRELID3AQ96N28 172 aa5.53□□□□□ -1.52
NPLOC4-210ENST00000572824 PKIGQ9Y2B9 76 aa5.53□□□□□ -1.52
NPLOC4-210ENST00000572824 H0Y9J4 135 aa5.52□□□□□ -1.53
NPLOC4-210ENST00000572824 PPP1R17O96001 155 aa5.52□□□□□ -1.53
NPLOC4-210ENST00000572824 TGIF2-C20orf24A0A0A6YYL0 155 aa5.51□□□□□ -1.53
NPLOC4-210ENST00000572824 TLX1NBP0CAT3 122 aa5.51□□□□□ -1.53
NPLOC4-210ENST00000572824 UBE2D1P51668 147 aa5.51□□□□□ -1.53
NPLOC4-210ENST00000572824 TMEM136Q6ZRR5 245 aa5.51□□□□□ -1.53
NPLOC4-210ENST00000572824 ORMDL3Q8N138 153 aa5.51□□□□□ -1.53
NPLOC4-210ENST00000572824 A0A1B0GW15 77 aa5.5□□□□□ -1.53
NPLOC4-210ENST00000572824 IFI27P40305 119 aaPredicted RBP5.5□□□□□ -1.53
NPLOC4-210ENST00000572824 UBE2BP63146 152 aa5.5□□□□□ -1.53
NPLOC4-210ENST00000572824 PEA15Q15121 130 aa5.5□□□□□ -1.53
NPLOC4-210ENST00000572824 TMEM141Q96I45 108 aa5.5□□□□□ -1.53
NPLOC4-210ENST00000572824 XAGE1AQ9HD64 81 aa5.5□□□□□ -1.53
NPLOC4-210ENST00000572824 TOMM7Q9P0U1 55 aa5.5□□□□□ -1.53
NPLOC4-210ENST00000572824 SNAPINO95295 136 aa5.49□□□□□ -1.53
NPLOC4-210ENST00000572824 SMAGPQ0VAQ4 97 aa5.49□□□□□ -1.53
NPLOC4-210ENST00000572824 C2orf66Q6UXQ4 117 aa5.49□□□□□ -1.53
NPLOC4-210ENST00000572824 DIRC1Q969H9 104 aa5.49□□□□□ -1.53
NPLOC4-210ENST00000572824 IMMP2LQ96T52 175 aa5.49□□□□□ -1.53
NPLOC4-210ENST00000572824 F8W036 122 aa5.48□□□□□ -1.53
NPLOC4-210ENST00000572824 KIAA1644Q3SXP7 199 aa5.48□□□□□ -1.53
NPLOC4-210ENST00000572824 AMELXQ99217 191 aa5.48□□□□□ -1.53
NPLOC4-210ENST00000572824 PYGO1Q9Y3Y4 419 aa5.48□□□□□ -1.53
NPLOC4-210ENST00000572824 A0A087X002 238 aa5.47□□□□□ -1.53
NPLOC4-210ENST00000572824 TRBV30A0A0K0K1B3 111 aa5.47□□□□□ -1.53
NPLOC4-210ENST00000572824 IGIPA6NJ69 53 aa5.47□□□□□ -1.53
NPLOC4-210ENST00000572824 NDUFC2-KCTD14E9PQ53 114 aa5.47□□□□□ -1.53
NPLOC4-210ENST00000572824 SCO1O75880 301 aa5.47□□□□□ -1.53
NPLOC4-210ENST00000572824 PPBPP02775 128 aa5.47□□□□□ -1.53
NPLOC4-210ENST00000572824 RAB5AP20339 215 aa5.47□□□□□ -1.53
NPLOC4-210ENST00000572824 TEX43Q6ZNM6 134 aa5.47□□□□□ -1.53
NPLOC4-210ENST00000572824 Q8N8P6 123 aa5.47□□□□□ -1.53
NPLOC4-210ENST00000572824 MAP1LC3AQ9H492 121 aa5.47□□□□□ -1.53
NPLOC4-210ENST00000572824 ANAPC11Q9NYG5 84 aa5.47□□□□□ -1.53
NPLOC4-210ENST00000572824 CDKN2A-AS1Q9UH64 79 aa5.47□□□□□ -1.53
NPLOC4-210ENST00000572824 MUC17Q685J3 4493 aa5.46□□□□□ -1.53
NPLOC4-210ENST00000572824 S100A8P05109 93 aa5.46□□□□□ -1.54
NPLOC4-210ENST00000572824 ADCYAP1P18509 176 aa5.46□□□□□ -1.54
NPLOC4-210ENST00000572824 CLLU1Q5K131 121 aa5.46□□□□□ -1.54
NPLOC4-210ENST00000572824 ATP5L2Q7Z4Y8 100 aa5.46□□□□□ -1.54
NPLOC4-210ENST00000572824 CYSLTR1Q9Y271 337 aa5.46□□□□□ -1.54
NPLOC4-210ENST00000572824 TSPAN13O95857 204 aa5.45□□□□□ -1.54
NPLOC4-210ENST00000572824 Q75L30 129 aa5.45□□□□□ -1.54
NPLOC4-210ENST00000572824 C22orf24Q9Y442 160 aa5.45□□□□□ -1.54
NPLOC4-210ENST00000572824 FAT4Q6V0I7 4981 aa5.45□□□□□ -1.54
NPLOC4-210ENST00000572824 F8WDY8 70 aa5.44□□□□□ -1.54
NPLOC4-210ENST00000572824 PRR4Q16378 134 aa5.44□□□□□ -1.54
NPLOC4-210ENST00000572824 PACRGQ96M98 296 aaPredicted RBP5.44□□□□□ -1.54
NPLOC4-210ENST00000572824 IGLV1-50A0A075B6I6 118 aa5.43□□□□□ -1.54
NPLOC4-210ENST00000572824 RPL37AP8A6NKH3 93 aa5.43□□□□□ -1.54
NPLOC4-210ENST00000572824 SMIM1B2RUZ4 78 aa5.43□□□□□ -1.54
NPLOC4-210ENST00000572824 UBE2V1Q13404 147 aa5.43□□□□□ -1.54
NPLOC4-210ENST00000572824 FAM19A3Q7Z5A8 133 aa5.43□□□□□ -1.54
NPLOC4-210ENST00000572824 Q8IZM0 81 aa5.43□□□□□ -1.54
NPLOC4-210ENST00000572824 C2orf88Q9BSF0 95 aa5.43□□□□□ -1.54
NPLOC4-210ENST00000572824 VCX2Q9H322 139 aa5.43□□□□□ -1.54
NPLOC4-210ENST00000572824 ZNF861PO60384 105 aa5.42□□□□□ -1.54
NPLOC4-210ENST00000572824 SPINK8P0C7L1 97 aa5.42□□□□□ -1.54
NPLOC4-210ENST00000572824 KRTAP13-2Q52LG2 175 aa5.42□□□□□ -1.54
NPLOC4-210ENST00000572824 Q6ZN92 141 aa5.42□□□□□ -1.54
NPLOC4-210ENST00000572824 RETNLBQ9BQ08 111 aa5.42□□□□□ -1.54
NPLOC4-210ENST00000572824 ALKBH7Q9BT30 221 aaPredicted RBP5.42□□□□□ -1.54
NPLOC4-210ENST00000572824 CKS1BP61024 79 aa5.41□□□□□ -1.54
NPLOC4-210ENST00000572824 ORMDL2Q53FV1 153 aa5.41□□□□□ -1.54
NPLOC4-210ENST00000572824 C6orf226Q5I0X4 101 aa5.41□□□□□ -1.54
NPLOC4-210ENST00000572824 LINC01561Q8N1V8 128 aa5.41□□□□□ -1.54
NPLOC4-210ENST00000572824 Q8NDZ9 215 aa5.41□□□□□ -1.54
NPLOC4-210ENST00000572824 TOMM6Q96B49 74 aa5.41□□□□□ -1.54
NPLOC4-210ENST00000572824 LINC00167Q96N53 147 aa5.41□□□□□ -1.54
NPLOC4-210ENST00000572824 LAMTOR2Q9Y2Q5 125 aa5.41□□□□□ -1.54
NPLOC4-210ENST00000572824 F8VRH5 84 aa5.4□□□□□ -1.54
NPLOC4-210ENST00000572824 RAB5BP61020 215 aa5.4□□□□□ -1.54
NPLOC4-210ENST00000572824 GAGE2AQ6NT46 116 aa5.4□□□□□ -1.54
NPLOC4-210ENST00000572824 MRPL55Q7Z7F7 128 aaKnown RBP5.4□□□□□ -1.54
NPLOC4-210ENST00000572824 MT-ND4LP03901 98 aa5.39□□□□□ -1.55
NPLOC4-210ENST00000572824 HERVK_113P63121 156 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms