RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 C10orf25Q5T742 122 aa8.39□□□□□ -1.07
CNOT1-217ENST00000569263 UNQ6190/PRO20217Q6UXQ8 127 aa8.39□□□□□ -1.07
CNOT1-217ENST00000569263 Q6ZSA8 131 aa8.39□□□□□ -1.07
CNOT1-217ENST00000569263 PMCHL2Q9BQD1 86 aa8.39□□□□□ -1.07
CNOT1-217ENST00000569263 FAM30AQ9NZY2 134 aa8.39□□□□□ -1.07
CNOT1-217ENST00000569263 IGKV2-24A0A0C4DH68 120 aa8.38□□□□□ -1.07
CNOT1-217ENST00000569263 TRBV30A0A0K0K1B3 111 aa8.38□□□□□ -1.07
CNOT1-217ENST00000569263 HAMPP81172 84 aa8.38□□□□□ -1.07
CNOT1-217ENST00000569263 RPL18AQ02543 176 aaKnown RBP8.38□□□□□ -1.07
CNOT1-217ENST00000569263 C6orf48Q9UBA6 75 aa8.38□□□□□ -1.07
CNOT1-217ENST00000569263 IGLV5-39A0A0G2JS06 123 aa8.37□□□□□ -1.07
CNOT1-217ENST00000569263 TMEM223A0PJW6 202 aa8.37□□□□□ -1.07
CNOT1-217ENST00000569263 IGKCP01834 107 aa8.37□□□□□ -1.07
CNOT1-217ENST00000569263 KRTDAPP60985 99 aa8.37□□□□□ -1.07
CNOT1-217ENST00000569263 PET117Q6UWS5 81 aa8.37□□□□□ -1.07
CNOT1-217ENST00000569263 A0A096LNI7 61 aa8.36□□□□□ -1.07
CNOT1-217ENST00000569263 C3orf79P0CE67 100 aa8.36□□□□□ -1.07
CNOT1-217ENST00000569263 CHTF8P0CG12 524 aa8.36□□□□□ -1.07
CNOT1-217ENST00000569263 XGP55808 180 aa8.36□□□□□ -1.07
CNOT1-217ENST00000569263 HIST3H2BBQ8N257 126 aa8.36□□□□□ -1.07
CNOT1-217ENST00000569263 DPH3Q96FX2 82 aa8.36□□□□□ -1.07
CNOT1-217ENST00000569263 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.36□□□□□ -1.07
CNOT1-217ENST00000569263 HERVK_113P61574 105 aa8.35□□□□□ -1.07
CNOT1-217ENST00000569263 GAGE2BQ13066 116 aa8.35□□□□□ -1.07
CNOT1-217ENST00000569263 MAJINQ3KP22 176 aa8.35□□□□□ -1.07
CNOT1-217ENST00000569263 SCXQ7RTU7 201 aa8.35□□□□□ -1.07
CNOT1-217ENST00000569263 LINC00474Q9P2X8 69 aa8.35□□□□□ -1.07
CNOT1-217ENST00000569263 C20orf202A1L168 122 aa8.34□□□□□ -1.07
CNOT1-217ENST00000569263 PANO1I0J062 215 aa8.34□□□□□ -1.07
CNOT1-217ENST00000569263 SNRPEP62304 92 aaKnown RBP8.34□□□□□ -1.07
CNOT1-217ENST00000569263 LINC01545Q5VT33 79 aa8.34□□□□□ -1.07
CNOT1-217ENST00000569263 SPACA4Q8TDM5 124 aa8.34□□□□□ -1.07
CNOT1-217ENST00000569263 APOBP04114 4563 aaKnown RBP8.33□□□□□ -1.08
CNOT1-217ENST00000569263 TLX1NBP0CAT3 122 aa8.33□□□□□ -1.08
CNOT1-217ENST00000569263 PTTG1IPP53801 180 aa8.33□□□□□ -1.08
CNOT1-217ENST00000569263 CIRBPQ14011 172 aaKnown RBP8.33□□□□□ -1.08
CNOT1-217ENST00000569263 KIAA1109Q2LD37 5005 aa8.33□□□□□ -1.08
CNOT1-217ENST00000569263 C9orf116Q5BN46 136 aaPredicted RBP8.33□□□□□ -1.08
CNOT1-217ENST00000569263 SFTA2Q6UW10 78 aa8.33□□□□□ -1.08
CNOT1-217ENST00000569263 CIRBP-AS1Q8TBR5 109 aa8.33□□□□□ -1.08
CNOT1-217ENST00000569263 HIST1H2BLQ99880 126 aa8.33□□□□□ -1.08
CNOT1-217ENST00000569263 RYR1P21817 5038 aa8.32□□□□□ -1.08
CNOT1-217ENST00000569263 DNAH8Q96JB1 4490 aa8.32□□□□□ -1.08
CNOT1-217ENST00000569263 NDUFC2-KCTD14E9PQ53 114 aa8.32□□□□□ -1.08
CNOT1-217ENST00000569263 GAGE2EQ4V326 116 aa8.31□□□□□ -1.08
CNOT1-217ENST00000569263 Q6ZRP5 223 aa8.31□□□□□ -1.08
CNOT1-217ENST00000569263 STPG4Q8N801 248 aa8.31□□□□□ -1.08
CNOT1-217ENST00000569263 GAGE2DQ9UEU5 116 aa8.31□□□□□ -1.08
CNOT1-217ENST00000569263 A0A087WYN8 130 aa8.3□□□□□ -1.08
CNOT1-217ENST00000569263 C5orf52A6NGY3 159 aa8.3□□□□□ -1.08
CNOT1-217ENST00000569263 LEPROTO15243 131 aa8.3□□□□□ -1.08
CNOT1-217ENST00000569263 PLEKHB2Q96CS7 222 aa8.3□□□□□ -1.08
CNOT1-217ENST00000569263 SMR3BP02814 79 aaPredicted RBP8.29□□□□□ -1.08
CNOT1-217ENST00000569263 ZNF625Q96I27 306 aaPredicted RBP8.29□□□□□ -1.08
CNOT1-217ENST00000569263 J3QQQ9 107 aa8.28□□□□□ -1.08
CNOT1-217ENST00000569263 LGALS3P17931 250 aaKnown RBP8.28□□□□□ -1.08
CNOT1-217ENST00000569263 AKR1D1P51857 326 aa8.28□□□□□ -1.08
CNOT1-217ENST00000569263 PLAC8Q9NZF1 115 aa8.28□□□□□ -1.08
CNOT1-217ENST00000569263 NDUFA12Q9UI09 145 aa8.28□□□□□ -1.08
CNOT1-217ENST00000569263 ERG28Q9UKR5 140 aa8.28□□□□□ -1.08
CNOT1-217ENST00000569263 MYMXA0A1B0GTQ4 84 aa8.27□□□□□ -1.09
CNOT1-217ENST00000569263 PFN2P35080 140 aa8.27□□□□□ -1.09
CNOT1-217ENST00000569263 TMA7Q9Y2S6 64 aaKnown RBP8.27□□□□□ -1.09
CNOT1-217ENST00000569263 E9PLD3 99 aa8.26□□□□□ -1.09
CNOT1-217ENST00000569263 TSPEAR-AS2P59090 65 aa8.26□□□□□ -1.09
CNOT1-217ENST00000569263 HERV-K104P63124 156 aa8.26□□□□□ -1.09
CNOT1-217ENST00000569263 MEIG1Q5JSS6 88 aa8.26□□□□□ -1.09
CNOT1-217ENST00000569263 LINC00528Q8N1L1 170 aa8.26□□□□□ -1.09
CNOT1-217ENST00000569263 Q8N1X5 172 aa8.26□□□□□ -1.09
CNOT1-217ENST00000569263 HSPG2P98160 4391 aa8.25□□□□□ -1.09
CNOT1-217ENST00000569263 FAM229AH3BQW9 127 aa8.25□□□□□ -1.09
CNOT1-217ENST00000569263 NMUP48645 174 aa8.25□□□□□ -1.09
CNOT1-217ENST00000569263 COX17Q14061 63 aa8.25□□□□□ -1.09
CNOT1-217ENST00000569263 ATOH7Q8N100 152 aa8.25□□□□□ -1.09
CNOT1-217ENST00000569263 XAGE1AQ9HD64 81 aa8.25□□□□□ -1.09
CNOT1-217ENST00000569263 HERC2O95714 4834 aa8.25□□□□□ -1.09
CNOT1-217ENST00000569263 A0A1W2PNN7 141 aa8.24□□□□□ -1.09
CNOT1-217ENST00000569263 C9orf129Q5T035 196 aaKnown RBP8.24□□□□□ -1.09
CNOT1-217ENST00000569263 Q5VSD8 79 aa8.24□□□□□ -1.09
CNOT1-217ENST00000569263 FAM19A5Q7Z5A7 132 aaPredicted RBP8.24□□□□□ -1.09
CNOT1-217ENST00000569263 FAM168BA1KXE4 195 aa8.23□□□□□ -1.09
CNOT1-217ENST00000569263 EPM2AB3EWF7 344 aa8.23□□□□□ -1.09
CNOT1-217ENST00000569263 LINC00158P58513 81 aa8.23□□□□□ -1.09
CNOT1-217ENST00000569263 C7orf33Q8WU49 177 aa8.23□□□□□ -1.09
CNOT1-217ENST00000569263 A0A0U1RRA0 63 aa8.22□□□□□ -1.09
CNOT1-217ENST00000569263 LINC00587B1AMM8 73 aa8.22□□□□□ -1.09
CNOT1-217ENST00000569263 SCGB1D1O95968 90 aa8.22□□□□□ -1.09
CNOT1-217ENST00000569263 PLA2G1BP04054 148 aaKnown RBP8.21□□□□□ -1.1
CNOT1-217ENST00000569263 SMIM13P0DJ93 91 aa8.21□□□□□ -1.1
CNOT1-217ENST00000569263 HSBP1L1C9JCN9 74 aa8.2□□□□□ -1.1
CNOT1-217ENST00000569263 M0QXV9 152 aa8.2□□□□□ -1.1
CNOT1-217ENST00000569263 RPL37AP61513 92 aaKnown RBP8.2□□□□□ -1.1
CNOT1-217ENST00000569263 SND1-IT1Q9HBX3 110 aa8.2□□□□□ -1.1
CNOT1-217ENST00000569263 IGKV2D-26A0A0A0MRZ7 120 aa8.19□□□□□ -1.1
CNOT1-217ENST00000569263 ZNF815PA8K554 130 aa8.19□□□□□ -1.1
CNOT1-217ENST00000569263 ANKRD39Q53RE8 183 aa8.19□□□□□ -1.1
CNOT1-217ENST00000569263 SERTAD4-AS1Q5TG53 156 aa8.19□□□□□ -1.1
CNOT1-217ENST00000569263 KRTAP17-1Q9BYP8 105 aa8.19□□□□□ -1.1
CNOT1-217ENST00000569263 PHF5AQ7RTV0 110 aaKnown RBP8.18□□□□□ -1.1
CNOT1-217ENST00000569263 MIR7-3HGQ8N6C7 128 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms