RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 BORCS7Q96B45 105 aa7.6□□□□□ -1.19
SMG1-213ENST00000567737 PPP1R17O96001 155 aa7.59□□□□□ -1.19
SMG1-213ENST00000567737 SPINK1P00995 79 aa7.59□□□□□ -1.19
SMG1-213ENST00000567737 RPL39P62891 51 aaKnown RBP7.59□□□□□ -1.19
SMG1-213ENST00000567737 MRPS36P82909 103 aaKnown RBP7.59□□□□□ -1.19
SMG1-213ENST00000567737 TMEM191AQ9H0A3 160 aa7.59□□□□□ -1.19
SMG1-213ENST00000567737 SPANXA1Q9NS26 97 aa7.59□□□□□ -1.19
SMG1-213ENST00000567737 MED9Q9NWA0 146 aa7.59□□□□□ -1.19
SMG1-213ENST00000567737 SMKR1H3BMG3 65 aa7.58□□□□□ -1.2
SMG1-213ENST00000567737 FAM19A2Q8N3H0 131 aa7.58□□□□□ -1.2
SMG1-213ENST00000567737 TOMM7Q9P0U1 55 aa7.58□□□□□ -1.2
SMG1-213ENST00000567737 PPP1R2P9O14990 202 aa7.57□□□□□ -1.2
SMG1-213ENST00000567737 GIPP09681 153 aaPredicted RBP7.57□□□□□ -1.2
SMG1-213ENST00000567737 PCOTHQ58A44 107 aa7.57□□□□□ -1.2
SMG1-213ENST00000567737 C6orf226Q5I0X4 101 aa7.57□□□□□ -1.2
SMG1-213ENST00000567737 LINC00299Q6ZSB3 139 aa7.57□□□□□ -1.2
SMG1-213ENST00000567737 FAM19A1Q7Z5A9 133 aa7.57□□□□□ -1.2
SMG1-213ENST00000567737 AMN1Q8IY45 258 aa7.57□□□□□ -1.2
SMG1-213ENST00000567737 Q8NBF4 154 aa7.57□□□□□ -1.2
SMG1-213ENST00000567737 PLEKHB2Q96CS7 222 aa7.57□□□□□ -1.2
SMG1-213ENST00000567737 USH2AO75445 5202 aa7.57□□□□□ -1.2
SMG1-213ENST00000567737 PDE6DO43924 150 aa7.56□□□□□ -1.2
SMG1-213ENST00000567737 LINC01561Q8N1V8 128 aa7.56□□□□□ -1.2
SMG1-213ENST00000567737 NKAPP1Q8N9T2 125 aa7.56□□□□□ -1.2
SMG1-213ENST00000567737 IGKV2-28A0A075B6P5 120 aa7.55□□□□□ -1.2
SMG1-213ENST00000567737 A8MWL6 223 aa7.55□□□□□ -1.2
SMG1-213ENST00000567737 TCAPO15273 167 aa7.55□□□□□ -1.2
SMG1-213ENST00000567737 IGKV2D-28P01615 120 aa7.55□□□□□ -1.2
SMG1-213ENST00000567737 COX6B2Q6YFQ2 88 aa7.55□□□□□ -1.2
SMG1-213ENST00000567737 NRACQ8N912 160 aa7.55□□□□□ -1.2
SMG1-213ENST00000567737 SYNE2Q8WXH0 6885 aaKnown RBP7.55□□□□□ -1.2
SMG1-213ENST00000567737 FCGBPQ9Y6R7 5405 aaPredicted RBP7.54□□□□□ -1.2
SMG1-213ENST00000567737 K7EN84 100 aa7.54□□□□□ -1.2
SMG1-213ENST00000567737 GATCO43716 136 aaKnown RBP7.54□□□□□ -1.2
SMG1-213ENST00000567737 NPSP0C0P6 89 aa7.54□□□□□ -1.2
SMG1-213ENST00000567737 Q6ZN92 141 aa7.54□□□□□ -1.2
SMG1-213ENST00000567737 IGLV5-37A0A075B6J1 123 aa7.53□□□□□ -1.2
SMG1-213ENST00000567737 A0A1B0GUT8 65 aa7.53□□□□□ -1.2
SMG1-213ENST00000567737 ARPC5O15511 151 aa7.53□□□□□ -1.2
SMG1-213ENST00000567737 CBLN2Q8IUK8 224 aa7.53□□□□□ -1.2
SMG1-213ENST00000567737 Q8IZM0 81 aa7.53□□□□□ -1.2
SMG1-213ENST00000567737 ALKBH7Q9BT30 221 aaPredicted RBP7.53□□□□□ -1.2
SMG1-213ENST00000567737 GNB1LQ9BYB4 327 aa7.53□□□□□ -1.2
SMG1-213ENST00000567737 F8VRH5 84 aa7.52□□□□□ -1.21
SMG1-213ENST00000567737 OCC1Q8TAD7 63 aa7.52□□□□□ -1.21
SMG1-213ENST00000567737 KRTAP4-11Q9BYQ6 195 aa7.52□□□□□ -1.21
SMG1-213ENST00000567737 PRYO14603 147 aa7.51□□□□□ -1.21
SMG1-213ENST00000567737 IFI27P40305 119 aaPredicted RBP7.51□□□□□ -1.21
SMG1-213ENST00000567737 PCP4P48539 62 aa7.51□□□□□ -1.21
SMG1-213ENST00000567737 TMEM126AQ9H061 195 aa7.51□□□□□ -1.21
SMG1-213ENST00000567737 Q8N377 158 aa7.5□□□□□ -1.21
SMG1-213ENST00000567737 SPRR4Q96PI1 79 aa7.5□□□□□ -1.21
SMG1-213ENST00000567737 HIGD2AQ9BW72 106 aa7.5□□□□□ -1.21
SMG1-213ENST00000567737 TEX46H3BTG2 121 aa7.49□□□□□ -1.21
SMG1-213ENST00000567737 SLC25A20O43772 301 aa7.49□□□□□ -1.21
SMG1-213ENST00000567737 C20orf78Q9BR46 151 aa7.49□□□□□ -1.21
SMG1-213ENST00000567737 FLGP20930 4061 aaPredicted RBP7.48□□□□□ -1.21
SMG1-213ENST00000567737 MACF1Q9UPN3 7388 aaKnown RBP7.48□□□□□ -1.21
SMG1-213ENST00000567737 HIGD1CA8MV81 97 aa7.48□□□□□ -1.21
SMG1-213ENST00000567737 TMEM238C9JI98 176 aa7.48□□□□□ -1.21
SMG1-213ENST00000567737 KRTAP4-16G5E9R7 235 aaPredicted RBP7.48□□□□□ -1.21
SMG1-213ENST00000567737 SCO1O75880 301 aa7.48□□□□□ -1.21
SMG1-213ENST00000567737 RPS29P62273 56 aaKnown RBP7.48□□□□□ -1.21
SMG1-213ENST00000567737 FAM231DQ6ZW35 169 aa7.48□□□□□ -1.21
SMG1-213ENST00000567737 ZNF706Q9Y5V0 76 aaPredicted RBP7.48□□□□□ -1.21
SMG1-213ENST00000567737 IGLV4-3A0A075B6K6 122 aa7.47□□□□□ -1.21
SMG1-213ENST00000567737 CXCL5P42830 114 aa7.47□□□□□ -1.21
SMG1-213ENST00000567737 TEX43Q6ZNM6 134 aa7.47□□□□□ -1.21
SMG1-213ENST00000567737 TMEM141Q96I45 108 aa7.47□□□□□ -1.21
SMG1-213ENST00000567737 C2orf88Q9BSF0 95 aa7.47□□□□□ -1.21
SMG1-213ENST00000567737 CFC1P0CG37 223 aa7.46□□□□□ -1.22
SMG1-213ENST00000567737 SMIM2Q9BVW6 85 aa7.46□□□□□ -1.22
SMG1-213ENST00000567737 M0R378 163 aa7.45□□□□□ -1.22
SMG1-213ENST00000567737 RIGQ13278 110 aa7.45□□□□□ -1.22
SMG1-213ENST00000567737 KRTAP15-1Q3LI76 137 aa7.45□□□□□ -1.22
SMG1-213ENST00000567737 PYGO1Q9Y3Y4 419 aa7.45□□□□□ -1.22
SMG1-213ENST00000567737 TRBV24-1A0A075B6N3 115 aa7.44□□□□□ -1.22
SMG1-213ENST00000567737 LINC00862A6NCI5 91 aa7.44□□□□□ -1.22
SMG1-213ENST00000567737 MRPL51Q4U2R6 128 aaKnown RBP7.44□□□□□ -1.22
SMG1-213ENST00000567737 CKS2P33552 79 aa7.43□□□□□ -1.22
SMG1-213ENST00000567737 EIF5A2Q9GZV4 153 aaKnown RBP7.43□□□□□ -1.22
SMG1-213ENST00000567737 ZNF345Q14585 488 aa7.42□□□□□ -1.22
SMG1-213ENST00000567737 KRTAP4-2Q9BYR5 136 aa7.42□□□□□ -1.22
SMG1-213ENST00000567737 GEMIN7Q9H840 131 aaKnown RBP7.42□□□□□ -1.22
SMG1-213ENST00000567737 KANTRA0A1W2PQU2 76 aa7.41□□□□□ -1.22
SMG1-213ENST00000567737 RAB5AP20339 215 aa7.41□□□□□ -1.22
SMG1-213ENST00000567737 RAB5BP61020 215 aa7.41□□□□□ -1.22
SMG1-213ENST00000567737 FAM104BQ5XKR9 115 aa7.41□□□□□ -1.22
SMG1-213ENST00000567737 LINC01551Q86U37 167 aa7.41□□□□□ -1.22
SMG1-213ENST00000567737 RGS21Q2M5E4 152 aa7.4□□□□□ -1.22
SMG1-213ENST00000567737 TAGLN2P37802 199 aaKnown RBP7.39□□□□□ -1.23
SMG1-213ENST00000567737 ZC2HC1BQ5TFG8 222 aa7.39□□□□□ -1.23
SMG1-213ENST00000567737 HERVK_113P63121 156 aa7.38□□□□□ -1.23
SMG1-213ENST00000567737 MOBPQ13875 183 aa7.38□□□□□ -1.23
SMG1-213ENST00000567737 VCX2Q9H322 139 aa7.38□□□□□ -1.23
SMG1-213ENST00000567737 CDKN2A-AS1Q9UH64 79 aa7.38□□□□□ -1.23
SMG1-213ENST00000567737 C9orf92A6NGG3 77 aa7.37□□□□□ -1.23
SMG1-213ENST00000567737 VPREB1P12018 145 aa7.37□□□□□ -1.23
SMG1-213ENST00000567737 SEC11AP67812 179 aa7.37□□□□□ -1.23
SMG1-213ENST00000567737 SSBP3-AS1Q7Z2R9 100 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms