RNA–Protein interactions for RNA: ENST00000567355.1

PKD1-233, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-233ENST00000567355 GAGE2EQ4V326 116 aa10.17□□□□□ -0.78
PKD1-233ENST00000567355 C9orf129Q5T035 196 aaKnown RBP10.17□□□□□ -0.78
PKD1-233ENST00000567355 KRTAP11-1Q8IUC1 163 aa10.17□□□□□ -0.78
PKD1-233ENST00000567355 GAGE2DQ9UEU5 116 aa10.17□□□□□ -0.78
PKD1-233ENST00000567355 PACRGQ96M98 296 aaPredicted RBP10.16□□□□□ -0.78
PKD1-233ENST00000567355 TINCRA0A1B0GVN0 87 aa10.15□□□□□ -0.78
PKD1-233ENST00000567355 PRSS2P07478 247 aa10.15□□□□□ -0.78
PKD1-233ENST00000567355 KRTAP10-8P60410 259 aa10.15□□□□□ -0.78
PKD1-233ENST00000567355 C6orf226Q5I0X4 101 aa10.15□□□□□ -0.78
PKD1-233ENST00000567355 URB1-AS1Q96HZ7 61 aa10.15□□□□□ -0.78
PKD1-233ENST00000567355 CST9LQ9H4G1 147 aa10.15□□□□□ -0.78
PKD1-233ENST00000567355 GEMIN7Q9H840 131 aaKnown RBP10.15□□□□□ -0.78
PKD1-233ENST00000567355 PLA2G2DQ9UNK4 145 aa10.15□□□□□ -0.78
PKD1-233ENST00000567355 SMIM1B2RUZ4 78 aa10.14□□□□□ -0.79
PKD1-233ENST00000567355 CKS1BP61024 79 aa10.14□□□□□ -0.79
PKD1-233ENST00000567355 REG3GQ6UW15 175 aa10.14□□□□□ -0.79
PKD1-233ENST00000567355 FA2HQ7L5A8 372 aa10.14□□□□□ -0.79
PKD1-233ENST00000567355 FAM19A5Q7Z5A7 132 aaPredicted RBP10.14□□□□□ -0.79
PKD1-233ENST00000567355 TOMM7Q9P0U1 55 aa10.14□□□□□ -0.79
PKD1-233ENST00000567355 A0A096LNJ9 63 aa10.13□□□□□ -0.79
PKD1-233ENST00000567355 C1orf137Q5JT78 98 aa10.13□□□□□ -0.79
PKD1-233ENST00000567355 F8VRH5 84 aa10.12□□□□□ -0.79
PKD1-233ENST00000567355 APOC3P02656 99 aa10.12□□□□□ -0.79
PKD1-233ENST00000567355 PDZD11Q5EBL8 140 aa10.12□□□□□ -0.79
PKD1-233ENST00000567355 LINC00469Q8N7U9 141 aa10.12□□□□□ -0.79
PKD1-233ENST00000567355 C18orf32Q8TCD1 76 aa10.12□□□□□ -0.79
PKD1-233ENST00000567355 PMVKQ15126 192 aa10.11□□□□□ -0.79
PKD1-233ENST00000567355 SMCO4Q9NRQ5 59 aa10.11□□□□□ -0.79
PKD1-233ENST00000567355 TRAPPC1Q9Y5R8 145 aa10.11□□□□□ -0.79
PKD1-233ENST00000567355 M0QXV9 152 aa10.1□□□□□ -0.79
PKD1-233ENST00000567355 IGLV7-43P04211 117 aa10.1□□□□□ -0.79
PKD1-233ENST00000567355 CXCL5P42830 114 aa10.1□□□□□ -0.79
PKD1-233ENST00000567355 ODF1Q14990 250 aa10.1□□□□□ -0.79
PKD1-233ENST00000567355 SVBPQ8N300 66 aa10.1□□□□□ -0.79
PKD1-233ENST00000567355 YPEL4Q96NS1 127 aa10.1□□□□□ -0.79
PKD1-233ENST00000567355 LRP2P98164 4655 aa10.09□□□□□ -0.79
PKD1-233ENST00000567355 SNAPINO95295 136 aa10.09□□□□□ -0.79
PKD1-233ENST00000567355 LINC00614P0C842 121 aa10.09□□□□□ -0.79
PKD1-233ENST00000567355 COX7B2Q8TF08 81 aa10.08□□□□□ -0.8
PKD1-233ENST00000567355 IGLC3P0DOY3 106 aa10.07□□□□□ -0.8
PKD1-233ENST00000567355 HBDP02042 147 aa10.06□□□□□ -0.8
PKD1-233ENST00000567355 SPINK8P0C7L1 97 aa10.06□□□□□ -0.8
PKD1-233ENST00000567355 NDUFA5Q16718 116 aa10.06□□□□□ -0.8
PKD1-233ENST00000567355 XAGE1AQ9HD64 81 aa10.06□□□□□ -0.8
PKD1-233ENST00000567355 C22orf24Q9Y442 160 aa10.05□□□□□ -0.8
PKD1-233ENST00000567355 IGLV5-39A0A0G2JS06 123 aa10.04□□□□□ -0.8
PKD1-233ENST00000567355 H0Y9J4 135 aa10.04□□□□□ -0.8
PKD1-233ENST00000567355 UBE2BP63146 152 aa10.04□□□□□ -0.8
PKD1-233ENST00000567355 DIRC1Q969H9 104 aa10.04□□□□□ -0.8
PKD1-233ENST00000567355 PMCHL1Q16048 86 aa10.03□□□□□ -0.8
PKD1-233ENST00000567355 TP73-AS1Q9UF72 201 aa10.03□□□□□ -0.8
PKD1-233ENST00000567355 H3BRM9 83 aa10.02□□□□□ -0.81
PKD1-233ENST00000567355 ZNF22P17026 224 aaPredicted RBP10.02□□□□□ -0.81
PKD1-233ENST00000567355 RAB5BP61020 215 aa10.02□□□□□ -0.81
PKD1-233ENST00000567355 ATP5LO75964 103 aa10□□□□□ -0.81
PKD1-233ENST00000567355 KRTAP1-4P0C5Y4 121 aa10□□□□□ -0.81
PKD1-233ENST00000567355 LBHQ53QV2 105 aaPredicted RBP10□□□□□ -0.81
PKD1-233ENST00000567355 NDUFA6P56556 154 aa9.99□□□□□ -0.81
PKD1-233ENST00000567355 IGLV5-37A0A075B6J1 123 aa9.98□□□□□ -0.81
PKD1-233ENST00000567355 NUPR1O60356 82 aa9.98□□□□□ -0.81
PKD1-233ENST00000567355 MRPL55Q7Z7F7 128 aaKnown RBP9.98□□□□□ -0.81
PKD1-233ENST00000567355 CHCHD1Q96BP2 118 aaKnown RBP9.98□□□□□ -0.81
PKD1-233ENST00000567355 C11orf86A6NJI1 115 aa9.97□□□□□ -0.81
PKD1-233ENST00000567355 BAGE3Q86Y29 109 aa9.97□□□□□ -0.81
PKD1-233ENST00000567355 ZNF861PO60384 105 aa9.96□□□□□ -0.82
PKD1-233ENST00000567355 CBLN2Q8IUK8 224 aa9.96□□□□□ -0.82
PKD1-233ENST00000567355 PRR26Q8N8Z3 221 aa9.96□□□□□ -0.82
PKD1-233ENST00000567355 LINC00167Q96N53 147 aa9.95□□□□□ -0.82
PKD1-233ENST00000567355 TRAV12-1A0A0B4J245 112 aa9.94□□□□□ -0.82
PKD1-233ENST00000567355 IGLV1-50A0A075B6I6 118 aa9.93□□□□□ -0.82
PKD1-233ENST00000567355 ERG28Q9UKR5 140 aa9.93□□□□□ -0.82
PKD1-233ENST00000567355 CHTOPQ9Y3Y2 248 aaKnown RBP9.93□□□□□ -0.82
PKD1-233ENST00000567355 BCE1O60756 84 aa9.92□□□□□ -0.82
PKD1-233ENST00000567355 COX17Q14061 63 aa9.92□□□□□ -0.82
PKD1-233ENST00000567355 TMEM170BQ5T4T1 132 aa9.92□□□□□ -0.82
PKD1-233ENST00000567355 ZNF625Q96I27 306 aaPredicted RBP9.92□□□□□ -0.82
PKD1-233ENST00000567355 RPL37AP8A6NKH3 93 aa9.91□□□□□ -0.82
PKD1-233ENST00000567355 PFN2P35080 140 aa9.91□□□□□ -0.82
PKD1-233ENST00000567355 IFI27L1Q96BM0 104 aa9.91□□□□□ -0.82
PKD1-233ENST00000567355 TMEM223A0PJW6 202 aa9.9□□□□□ -0.82
PKD1-233ENST00000567355 SFTA2Q6UW10 78 aa9.9□□□□□ -0.82
PKD1-233ENST00000567355 SND1-IT1Q9HBX3 110 aa9.9□□□□□ -0.82
PKD1-233ENST00000567355 LPAP08519 4548 aa9.9□□□□□ -0.82
PKD1-233ENST00000567355 RNF213Q63HN8 5207 aa9.89□□□□□ -0.83
PKD1-233ENST00000567355 TRGC2P03986 189 aa9.89□□□□□ -0.83
PKD1-233ENST00000567355 VPREB1P12018 145 aa9.89□□□□□ -0.83
PKD1-233ENST00000567355 KRTAP13-1Q8IUC0 172 aa9.89□□□□□ -0.83
PKD1-233ENST00000567355 GAGE10A6NGK3 116 aa9.88□□□□□ -0.83
PKD1-233ENST00000567355 LINC00310P59036 64 aa9.88□□□□□ -0.83
PKD1-233ENST00000567355 SLC7A5P1Q8MH63 180 aa9.88□□□□□ -0.83
PKD1-233ENST00000567355 NKAPP1Q8N9T2 125 aa9.88□□□□□ -0.83
PKD1-233ENST00000567355 RPL28P46779 137 aaKnown RBP9.87□□□□□ -0.83
PKD1-233ENST00000567355 FAM19A2Q8N3H0 131 aa9.87□□□□□ -0.83
PKD1-233ENST00000567355 Q8NDZ9 215 aa9.87□□□□□ -0.83
PKD1-233ENST00000567355 HSBP1O75506 76 aa9.86□□□□□ -0.83
PKD1-233ENST00000567355 SCO1O75880 301 aa9.86□□□□□ -0.83
PKD1-233ENST00000567355 RPL13AP40429 203 aaKnown RBP9.86□□□□□ -0.83
PKD1-233ENST00000567355 COLCA2A8K830 154 aa9.84□□□□□ -0.83
PKD1-233ENST00000567355 IGKV2-28A0A075B6P5 120 aa9.83□□□□□ -0.84
PKD1-233ENST00000567355 SERF1AO75920 110 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms