RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 RNF151Q2KHN1 245 aa7.84□□□□□ -1.15
SF3B3-208ENST00000567250 C6orf226Q5I0X4 101 aa7.84□□□□□ -1.15
SF3B3-208ENST00000567250 TMEM170BQ5T4T1 132 aa7.84□□□□□ -1.15
SF3B3-208ENST00000567250 TRBV30A0A0K0K1B3 111 aa7.83□□□□□ -1.16
SF3B3-208ENST00000567250 LOC107984640A0A0U1RRK4 108 aa7.83□□□□□ -1.16
SF3B3-208ENST00000567250 SPINK8P0C7L1 97 aa7.83□□□□□ -1.16
SF3B3-208ENST00000567250 PLNP26678 52 aa7.83□□□□□ -1.16
SF3B3-208ENST00000567250 KIAA0087Q14695 138 aa7.83□□□□□ -1.16
SF3B3-208ENST00000567250 SDIM1Q6ZPB5 146 aa7.83□□□□□ -1.16
SF3B3-208ENST00000567250 COX7B2Q8TF08 81 aa7.83□□□□□ -1.16
SF3B3-208ENST00000567250 LINC00474Q9P2X8 69 aa7.83□□□□□ -1.16
SF3B3-208ENST00000567250 ODF1Q14990 250 aa7.82□□□□□ -1.16
SF3B3-208ENST00000567250 LRP1BQ9NZR2 4599 aa7.81□□□□□ -1.16
SF3B3-208ENST00000567250 S100A6P06703 90 aa7.81□□□□□ -1.16
SF3B3-208ENST00000567250 SFTA2Q6UW10 78 aa7.81□□□□□ -1.16
SF3B3-208ENST00000567250 FAM30AQ9NZY2 134 aa7.81□□□□□ -1.16
SF3B3-208ENST00000567250 DPM2O94777 84 aa7.8□□□□□ -1.16
SF3B3-208ENST00000567250 XGP55808 180 aa7.8□□□□□ -1.16
SF3B3-208ENST00000567250 RPL18AQ02543 176 aaKnown RBP7.8□□□□□ -1.16
SF3B3-208ENST00000567250 CIRBPQ14011 172 aaKnown RBP7.8□□□□□ -1.16
SF3B3-208ENST00000567250 C2orf82Q6UX34 121 aa7.8□□□□□ -1.16
SF3B3-208ENST00000567250 SCXQ7RTU7 201 aa7.8□□□□□ -1.16
SF3B3-208ENST00000567250 C6orf48Q9UBA6 75 aa7.8□□□□□ -1.16
SF3B3-208ENST00000567250 A0A096LNI7 61 aa7.79□□□□□ -1.16
SF3B3-208ENST00000567250 IGKV2-24A0A0C4DH68 120 aa7.79□□□□□ -1.16
SF3B3-208ENST00000567250 IGLV5-39A0A0G2JS06 123 aa7.79□□□□□ -1.16
SF3B3-208ENST00000567250 UNQ6190/PRO20217Q6UXQ8 127 aa7.79□□□□□ -1.16
SF3B3-208ENST00000567250 SPACA4Q8TDM5 124 aa7.79□□□□□ -1.16
SF3B3-208ENST00000567250 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.79□□□□□ -1.16
SF3B3-208ENST00000567250 TMEM223A0PJW6 202 aa7.78□□□□□ -1.16
SF3B3-208ENST00000567250 SYS1-DBNDD2H3BUS1 97 aa7.78□□□□□ -1.16
SF3B3-208ENST00000567250 IGKCP01834 107 aa7.78□□□□□ -1.16
SF3B3-208ENST00000567250 TLX1NBP0CAT3 122 aa7.78□□□□□ -1.16
SF3B3-208ENST00000567250 CHTF8P0CG12 524 aa7.78□□□□□ -1.16
SF3B3-208ENST00000567250 S100A2P29034 98 aa7.78□□□□□ -1.16
SF3B3-208ENST00000567250 PTTG1IPP53801 180 aa7.78□□□□□ -1.16
SF3B3-208ENST00000567250 HERVK_113P61574 105 aa7.78□□□□□ -1.16
SF3B3-208ENST00000567250 MAJINQ3KP22 176 aa7.78□□□□□ -1.16
SF3B3-208ENST00000567250 C10orf25Q5T742 122 aa7.78□□□□□ -1.16
SF3B3-208ENST00000567250 DPH3Q96FX2 82 aa7.78□□□□□ -1.16
SF3B3-208ENST00000567250 C20orf202A1L168 122 aa7.77□□□□□ -1.17
SF3B3-208ENST00000567250 NDUFC2-KCTD14E9PQ53 114 aa7.77□□□□□ -1.17
SF3B3-208ENST00000567250 PET117Q6UWS5 81 aa7.77□□□□□ -1.17
SF3B3-208ENST00000567250 CIRBP-AS1Q8TBR5 109 aa7.77□□□□□ -1.17
SF3B3-208ENST00000567250 HAMPP81172 84 aa7.76□□□□□ -1.17
SF3B3-208ENST00000567250 GAGE2BQ13066 116 aa7.76□□□□□ -1.17
SF3B3-208ENST00000567250 APOBP04114 4563 aaKnown RBP7.75□□□□□ -1.17
SF3B3-208ENST00000567250 A0A087WYN8 130 aa7.75□□□□□ -1.17
SF3B3-208ENST00000567250 AKR1D1P51857 326 aa7.75□□□□□ -1.17
SF3B3-208ENST00000567250 LINC01545Q5VT33 79 aa7.75□□□□□ -1.17
SF3B3-208ENST00000567250 Q8N1X5 172 aa7.75□□□□□ -1.17
SF3B3-208ENST00000567250 KIAA1109Q2LD37 5005 aa7.75□□□□□ -1.17
SF3B3-208ENST00000567250 PANO1I0J062 215 aa7.74□□□□□ -1.17
SF3B3-208ENST00000567250 C3orf79P0CE67 100 aa7.74□□□□□ -1.17
SF3B3-208ENST00000567250 KRTDAPP60985 99 aa7.74□□□□□ -1.17
SF3B3-208ENST00000567250 HIST3H2BBQ8N257 126 aa7.74□□□□□ -1.17
SF3B3-208ENST00000567250 STPG4Q8N801 248 aa7.74□□□□□ -1.17
SF3B3-208ENST00000567250 PMCHL2Q9BQD1 86 aa7.74□□□□□ -1.17
SF3B3-208ENST00000567250 PLAC8Q9NZF1 115 aa7.74□□□□□ -1.17
SF3B3-208ENST00000567250 C9orf116Q5BN46 136 aaPredicted RBP7.73□□□□□ -1.17
SF3B3-208ENST00000567250 Q6ZRP5 223 aa7.73□□□□□ -1.17
SF3B3-208ENST00000567250 PLEKHB2Q96CS7 222 aa7.73□□□□□ -1.17
SF3B3-208ENST00000567250 GAGE2EQ4V326 116 aa7.72□□□□□ -1.17
SF3B3-208ENST00000567250 GAGE2DQ9UEU5 116 aa7.72□□□□□ -1.17
SF3B3-208ENST00000567250 RYR1P21817 5038 aa7.71□□□□□ -1.18
SF3B3-208ENST00000567250 EPM2AB3EWF7 344 aa7.71□□□□□ -1.18
SF3B3-208ENST00000567250 LEPROTO15243 131 aa7.71□□□□□ -1.18
SF3B3-208ENST00000567250 SMR3BP02814 79 aaPredicted RBP7.71□□□□□ -1.18
SF3B3-208ENST00000567250 HERV-K104P63124 156 aa7.71□□□□□ -1.18
SF3B3-208ENST00000567250 COX17Q14061 63 aa7.71□□□□□ -1.18
SF3B3-208ENST00000567250 Q5VSD8 79 aa7.71□□□□□ -1.18
SF3B3-208ENST00000567250 C7orf33Q8WU49 177 aa7.71□□□□□ -1.18
SF3B3-208ENST00000567250 HIST1H2BLQ99880 126 aa7.71□□□□□ -1.18
SF3B3-208ENST00000567250 LINC00587B1AMM8 73 aa7.7□□□□□ -1.18
SF3B3-208ENST00000567250 PLA2G1BP04054 148 aaKnown RBP7.7□□□□□ -1.18
SF3B3-208ENST00000567250 LGALS3P17931 250 aaKnown RBP7.7□□□□□ -1.18
SF3B3-208ENST00000567250 NMUP48645 174 aa7.7□□□□□ -1.18
SF3B3-208ENST00000567250 ZNF625Q96I27 306 aaPredicted RBP7.7□□□□□ -1.18
SF3B3-208ENST00000567250 NDUFA12Q9UI09 145 aa7.7□□□□□ -1.18
SF3B3-208ENST00000567250 ERG28Q9UKR5 140 aa7.7□□□□□ -1.18
SF3B3-208ENST00000567250 HSPG2P98160 4391 aa7.69□□□□□ -1.18
SF3B3-208ENST00000567250 MYMXA0A1B0GTQ4 84 aa7.69□□□□□ -1.18
SF3B3-208ENST00000567250 J3QQQ9 107 aa7.69□□□□□ -1.18
SF3B3-208ENST00000567250 SNRPEP62304 92 aaKnown RBP7.69□□□□□ -1.18
SF3B3-208ENST00000567250 HERC2O95714 4834 aa7.68□□□□□ -1.18
SF3B3-208ENST00000567250 DNAH8Q96JB1 4490 aa7.68□□□□□ -1.18
SF3B3-208ENST00000567250 C5orf52A6NGY3 159 aa7.68□□□□□ -1.18
SF3B3-208ENST00000567250 E9PLD3 99 aa7.68□□□□□ -1.18
SF3B3-208ENST00000567250 PFN2P35080 140 aa7.68□□□□□ -1.18
SF3B3-208ENST00000567250 MEIG1Q5JSS6 88 aa7.68□□□□□ -1.18
SF3B3-208ENST00000567250 XAGE1AQ9HD64 81 aa7.67□□□□□ -1.18
SF3B3-208ENST00000567250 TSPEAR-AS2P59090 65 aa7.66□□□□□ -1.18
SF3B3-208ENST00000567250 RPL37AP61513 92 aaKnown RBP7.66□□□□□ -1.18
SF3B3-208ENST00000567250 C9orf129Q5T035 196 aaKnown RBP7.66□□□□□ -1.18
SF3B3-208ENST00000567250 FAM19A5Q7Z5A7 132 aaPredicted RBP7.66□□□□□ -1.18
SF3B3-208ENST00000567250 A0A1W2PNN7 141 aa7.65□□□□□ -1.18
SF3B3-208ENST00000567250 M0QXV9 152 aa7.65□□□□□ -1.18
SF3B3-208ENST00000567250 LINC00158P58513 81 aa7.65□□□□□ -1.18
SF3B3-208ENST00000567250 FAM168BA1KXE4 195 aa7.63□□□□□ -1.19
SF3B3-208ENST00000567250 HSBP1L1C9JCN9 74 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms