RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 C6orf226Q5I0X4 101 aa11.55□□□□□ -0.56
IFT140-208ENST00000566818 ALKBH7Q9BT30 221 aaPredicted RBP11.55□□□□□ -0.56
IFT140-208ENST00000566818 M0QXV9 152 aa11.53□□□□□ -0.56
IFT140-208ENST00000566818 FA2HQ7L5A8 372 aa11.53□□□□□ -0.56
IFT140-208ENST00000566818 MRPL18Q9H0U6 180 aaKnown RBP11.53□□□□□ -0.56
IFT140-208ENST00000566818 RPS10P5Q9NQ39 176 aa11.53□□□□□ -0.56
IFT140-208ENST00000566818 SMCO4Q9NRQ5 59 aa11.53□□□□□ -0.56
IFT140-208ENST00000566818 CDKN2A-AS1Q9UH64 79 aa11.53□□□□□ -0.56
IFT140-208ENST00000566818 CARHSP1Q9Y2V2 147 aaKnown RBP11.53□□□□□ -0.56
IFT140-208ENST00000566818 LINC01546A6NGU7 62 aa11.52□□□□□ -0.57
IFT140-208ENST00000566818 CXCL5P42830 114 aa11.52□□□□□ -0.57
IFT140-208ENST00000566818 UBE2BP63146 152 aa11.52□□□□□ -0.57
IFT140-208ENST00000566818 FABP9Q0Z7S8 132 aa11.52□□□□□ -0.57
IFT140-208ENST00000566818 C10orf91Q5T1B1 145 aa11.52□□□□□ -0.57
IFT140-208ENST00000566818 LINC00469Q8N7U9 141 aa11.52□□□□□ -0.57
IFT140-208ENST00000566818 UBR4Q5T4S7 5183 aa11.5□□□□□ -0.57
IFT140-208ENST00000566818 F8VRH5 84 aa11.5□□□□□ -0.57
IFT140-208ENST00000566818 TINCRA0A1B0GVN0 87 aa11.49□□□□□ -0.57
IFT140-208ENST00000566818 IGLV7-43P04211 117 aa11.49□□□□□ -0.57
IFT140-208ENST00000566818 C9orf129Q5T035 196 aaKnown RBP11.49□□□□□ -0.57
IFT140-208ENST00000566818 DIRC1Q969H9 104 aa11.49□□□□□ -0.57
IFT140-208ENST00000566818 KRTAP10-8P60410 259 aa11.48□□□□□ -0.57
IFT140-208ENST00000566818 SMIM1B2RUZ4 78 aa11.47□□□□□ -0.57
IFT140-208ENST00000566818 PDZD11Q5EBL8 140 aa11.47□□□□□ -0.57
IFT140-208ENST00000566818 IGLV5-45A0A087WSX0 123 aa11.46□□□□□ -0.57
IFT140-208ENST00000566818 PMVKQ15126 192 aa11.46□□□□□ -0.57
IFT140-208ENST00000566818 KRTAP7-1Q8IUC3 87 aa11.46□□□□□ -0.57
IFT140-208ENST00000566818 CST9LQ9H4G1 147 aa11.46□□□□□ -0.57
IFT140-208ENST00000566818 KRTAP11-1Q8IUC1 163 aa11.45□□□□□ -0.58
IFT140-208ENST00000566818 COX7B2Q8TF08 81 aa11.45□□□□□ -0.58
IFT140-208ENST00000566818 NDUFA5Q16718 116 aa11.44□□□□□ -0.58
IFT140-208ENST00000566818 H0Y9J4 135 aa11.43□□□□□ -0.58
IFT140-208ENST00000566818 H3BRM9 83 aa11.43□□□□□ -0.58
IFT140-208ENST00000566818 LBHQ53QV2 105 aaPredicted RBP11.43□□□□□ -0.58
IFT140-208ENST00000566818 XAGE1AQ9HD64 81 aa11.43□□□□□ -0.58
IFT140-208ENST00000566818 TRAPPC1Q9Y5R8 145 aa11.43□□□□□ -0.58
IFT140-208ENST00000566818 SNAPINO95295 136 aa11.41□□□□□ -0.58
IFT140-208ENST00000566818 APOC3P02656 99 aa11.41□□□□□ -0.58
IFT140-208ENST00000566818 SPINK8P0C7L1 97 aa11.41□□□□□ -0.58
IFT140-208ENST00000566818 ODF1Q14990 250 aa11.41□□□□□ -0.58
IFT140-208ENST00000566818 SVBPQ8N300 66 aa11.4□□□□□ -0.58
IFT140-208ENST00000566818 C18orf32Q8TCD1 76 aa11.4□□□□□ -0.58
IFT140-208ENST00000566818 C22orf24Q9Y442 160 aa11.4□□□□□ -0.58
IFT140-208ENST00000566818 NUPR1O60356 82 aa11.39□□□□□ -0.59
IFT140-208ENST00000566818 HBDP02042 147 aa11.39□□□□□ -0.59
IFT140-208ENST00000566818 NDUFA6P56556 154 aa11.39□□□□□ -0.59
IFT140-208ENST00000566818 TP73-AS1Q9UF72 201 aa11.39□□□□□ -0.59
IFT140-208ENST00000566818 LINC00614P0C842 121 aa11.38□□□□□ -0.59
IFT140-208ENST00000566818 IGLC3P0DOY3 106 aa11.38□□□□□ -0.59
IFT140-208ENST00000566818 RAB5BP61020 215 aa11.38□□□□□ -0.59
IFT140-208ENST00000566818 ATP5LO75964 103 aa11.37□□□□□ -0.59
IFT140-208ENST00000566818 A0A096LNJ9 63 aa11.36□□□□□ -0.59
IFT140-208ENST00000566818 MRPL55Q7Z7F7 128 aaKnown RBP11.36□□□□□ -0.59
IFT140-208ENST00000566818 URB1-AS1Q96HZ7 61 aa11.35□□□□□ -0.59
IFT140-208ENST00000566818 IGLV1-50A0A075B6I6 118 aa11.34□□□□□ -0.59
IFT140-208ENST00000566818 PRR26Q8N8Z3 221 aa11.34□□□□□ -0.59
IFT140-208ENST00000566818 ZNF22P17026 224 aaPredicted RBP11.33□□□□□ -0.6
IFT140-208ENST00000566818 PMCHL1Q16048 86 aa11.33□□□□□ -0.6
IFT140-208ENST00000566818 IGLV5-39A0A0G2JS06 123 aa11.32□□□□□ -0.6
IFT140-208ENST00000566818 ZNF861PO60384 105 aa11.32□□□□□ -0.6
IFT140-208ENST00000566818 LRP2P98164 4655 aa11.32□□□□□ -0.6
IFT140-208ENST00000566818 NKAPP1Q8N9T2 125 aa11.31□□□□□ -0.6
IFT140-208ENST00000566818 KRTAP1-4P0C5Y4 121 aa11.3□□□□□ -0.6
IFT140-208ENST00000566818 RPL13AP40429 203 aaKnown RBP11.3□□□□□ -0.6
IFT140-208ENST00000566818 IGLV5-37A0A075B6J1 123 aa11.29□□□□□ -0.6
IFT140-208ENST00000566818 BCE1O60756 84 aa11.29□□□□□ -0.6
IFT140-208ENST00000566818 RPL28P46779 137 aaKnown RBP11.29□□□□□ -0.6
IFT140-208ENST00000566818 SFTA2Q6UW10 78 aa11.29□□□□□ -0.6
IFT140-208ENST00000566818 BAGE3Q86Y29 109 aa11.29□□□□□ -0.6
IFT140-208ENST00000566818 LINC00167Q96N53 147 aa11.29□□□□□ -0.6
IFT140-208ENST00000566818 PFN2P35080 140 aa11.28□□□□□ -0.6
IFT140-208ENST00000566818 TMEM170BQ5T4T1 132 aa11.28□□□□□ -0.6
IFT140-208ENST00000566818 GAGE10A6NGK3 116 aa11.27□□□□□ -0.61
IFT140-208ENST00000566818 C11orf86A6NJI1 115 aa11.27□□□□□ -0.61
IFT140-208ENST00000566818 CHCHD1Q96BP2 118 aaKnown RBP11.27□□□□□ -0.61
IFT140-208ENST00000566818 ERG28Q9UKR5 140 aa11.27□□□□□ -0.61
IFT140-208ENST00000566818 RPL37AP8A6NKH3 93 aa11.26□□□□□ -0.61
IFT140-208ENST00000566818 CHTOPQ9Y3Y2 248 aaKnown RBP11.26□□□□□ -0.61
IFT140-208ENST00000566818 COX17Q14061 63 aa11.25□□□□□ -0.61
IFT140-208ENST00000566818 YPEL4Q96NS1 127 aa11.25□□□□□ -0.61
IFT140-208ENST00000566818 TRAV12-1A0A0B4J245 112 aa11.22□□□□□ -0.61
IFT140-208ENST00000566818 RPL24P83731 157 aaKnown RBP11.22□□□□□ -0.61
IFT140-208ENST00000566818 IFI27L1Q96BM0 104 aa11.22□□□□□ -0.61
IFT140-208ENST00000566818 SND1-IT1Q9HBX3 110 aa11.22□□□□□ -0.61
IFT140-208ENST00000566818 UBE2AP49459 152 aa11.21□□□□□ -0.61
IFT140-208ENST00000566818 ZNF625Q96I27 306 aaPredicted RBP11.21□□□□□ -0.61
IFT140-208ENST00000566818 IGKV2-28A0A075B6P5 120 aa11.2□□□□□ -0.62
IFT140-208ENST00000566818 IGKV2D-28P01615 120 aa11.2□□□□□ -0.62
IFT140-208ENST00000566818 CBLN2Q8IUK8 224 aa11.2□□□□□ -0.62
IFT140-208ENST00000566818 RNF213Q63HN8 5207 aa11.19□□□□□ -0.62
IFT140-208ENST00000566818 HSBP1O75506 76 aa11.19□□□□□ -0.62
IFT140-208ENST00000566818 VPREB1P12018 145 aa11.19□□□□□ -0.62
IFT140-208ENST00000566818 TMEM223A0PJW6 202 aa11.17□□□□□ -0.62
IFT140-208ENST00000566818 SCO1O75880 301 aa11.17□□□□□ -0.62
IFT140-208ENST00000566818 LINC00158P58513 81 aa11.16□□□□□ -0.62
IFT140-208ENST00000566818 CRYGAP11844 174 aa11.15□□□□□ -0.62
IFT140-208ENST00000566818 KRTAP13-1Q8IUC0 172 aa11.15□□□□□ -0.62
IFT140-208ENST00000566818 ATP6V1G1O75348 118 aa11.13□□□□□ -0.63
IFT140-208ENST00000566818 FAM19A2Q8N3H0 131 aa11.13□□□□□ -0.63
IFT140-208ENST00000566818 TMEM126AQ9H061 195 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms