RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 CNBPP62633 177 aaKnown RBP7.47□□□□□ -1.21
KARS-207ENST00000566560 HIST1H2BLQ99880 126 aa7.47□□□□□ -1.21
KARS-207ENST00000566560 PMCHL2Q9BQD1 86 aa7.47□□□□□ -1.21
KARS-207ENST00000566560 TOMM7Q9P0U1 55 aa7.47□□□□□ -1.21
KARS-207ENST00000566560 PKD1P98161 4303 aa7.46□□□□□ -1.22
KARS-207ENST00000566560 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.46□□□□□ -1.22
KARS-207ENST00000566560 C5orf52A6NGY3 159 aa7.46□□□□□ -1.22
KARS-207ENST00000566560 PRSS2P07478 247 aa7.46□□□□□ -1.22
KARS-207ENST00000566560 C3orf79P0CE67 100 aa7.46□□□□□ -1.22
KARS-207ENST00000566560 PLNP26678 52 aa7.46□□□□□ -1.22
KARS-207ENST00000566560 CARD19Q96LW7 228 aa7.46□□□□□ -1.22
KARS-207ENST00000566560 CAMK2N2Q96S95 79 aa7.46□□□□□ -1.22
KARS-207ENST00000566560 DPM2O94777 84 aa7.45□□□□□ -1.22
KARS-207ENST00000566560 PET117Q6UWS5 81 aa7.45□□□□□ -1.22
KARS-207ENST00000566560 C2orf48Q96LS8 159 aa7.45□□□□□ -1.22
KARS-207ENST00000566560 DNAH11Q96DT5 4516 aa7.45□□□□□ -1.22
KARS-207ENST00000566560 C20orf202A1L168 122 aa7.44□□□□□ -1.22
KARS-207ENST00000566560 IGKCP01834 107 aa7.44□□□□□ -1.22
KARS-207ENST00000566560 SLPIP03973 132 aa7.44□□□□□ -1.22
KARS-207ENST00000566560 GCSHP23434 173 aa7.44□□□□□ -1.22
KARS-207ENST00000566560 SYCNQ0VAF6 134 aa7.44□□□□□ -1.22
KARS-207ENST00000566560 LINC01620Q4KN68 170 aa7.44□□□□□ -1.22
KARS-207ENST00000566560 LINC01545Q5VT33 79 aa7.44□□□□□ -1.22
KARS-207ENST00000566560 Q8IZM0 81 aa7.44□□□□□ -1.22
KARS-207ENST00000566560 PKHD1P08F94 4074 aa7.43□□□□□ -1.22
KARS-207ENST00000566560 IGLV5-39A0A0G2JS06 123 aa7.43□□□□□ -1.22
KARS-207ENST00000566560 TMEM223A0PJW6 202 aa7.43□□□□□ -1.22
KARS-207ENST00000566560 NDUFA1O15239 70 aa7.43□□□□□ -1.22
KARS-207ENST00000566560 KIAA0087Q14695 138 aa7.43□□□□□ -1.22
KARS-207ENST00000566560 LCE3BQ5TA77 95 aa7.43□□□□□ -1.22
KARS-207ENST00000566560 Q6ZRU5 148 aa7.43□□□□□ -1.22
KARS-207ENST00000566560 COX7B2Q8TF08 81 aa7.43□□□□□ -1.22
KARS-207ENST00000566560 F8WDY8 70 aa7.42□□□□□ -1.22
KARS-207ENST00000566560 CXCL5P42830 114 aa7.42□□□□□ -1.22
KARS-207ENST00000566560 CKS1BP61024 79 aa7.42□□□□□ -1.22
KARS-207ENST00000566560 C2orf82Q6UX34 121 aa7.42□□□□□ -1.22
KARS-207ENST00000566560 C9orf163Q8N9P6 203 aa7.42□□□□□ -1.22
KARS-207ENST00000566560 KRTAP10-1P60331 282 aa7.41□□□□□ -1.22
KARS-207ENST00000566560 HERVK_113P61574 105 aa7.41□□□□□ -1.22
KARS-207ENST00000566560 C6orf226Q5I0X4 101 aa7.41□□□□□ -1.22
KARS-207ENST00000566560 C10orf25Q5T742 122 aa7.4□□□□□ -1.22
KARS-207ENST00000566560 UNQ6190/PRO20217Q6UXQ8 127 aa7.4□□□□□ -1.22
KARS-207ENST00000566560 PKIGQ9Y2B9 76 aa7.4□□□□□ -1.22
KARS-207ENST00000566560 TRBV30A0A0K0K1B3 111 aa7.39□□□□□ -1.23
KARS-207ENST00000566560 C6orf48Q9UBA6 75 aa7.39□□□□□ -1.23
KARS-207ENST00000566560 DNAH5Q8TE73 4624 aa7.39□□□□□ -1.23
KARS-207ENST00000566560 AKR1D1P51857 326 aa7.38□□□□□ -1.23
KARS-207ENST00000566560 EPPK1P58107 5090 aaKnown RBP7.37□□□□□ -1.23
KARS-207ENST00000566560 RPL18AQ02543 176 aaKnown RBP7.37□□□□□ -1.23
KARS-207ENST00000566560 ATOH7Q8N100 152 aa7.37□□□□□ -1.23
KARS-207ENST00000566560 PLEKHB2Q96CS7 222 aa7.37□□□□□ -1.23
KARS-207ENST00000566560 LOC107984640A0A0U1RRK4 108 aa7.36□□□□□ -1.23
KARS-207ENST00000566560 LEPROTO15243 131 aa7.36□□□□□ -1.23
KARS-207ENST00000566560 TSPEAR-AS2P59090 65 aa7.36□□□□□ -1.23
KARS-207ENST00000566560 SFTA2Q6UW10 78 aa7.36□□□□□ -1.23
KARS-207ENST00000566560 SDIM1Q6ZPB5 146 aa7.36□□□□□ -1.23
KARS-207ENST00000566560 DYNC1H1Q14204 4646 aaKnown RBP7.36□□□□□ -1.23
KARS-207ENST00000566560 A0A096LNI7 61 aa7.35□□□□□ -1.23
KARS-207ENST00000566560 IGKV2-24A0A0C4DH68 120 aa7.35□□□□□ -1.23
KARS-207ENST00000566560 E9PLD3 99 aa7.35□□□□□ -1.23
KARS-207ENST00000566560 CHTF8P0CG12 524 aa7.35□□□□□ -1.23
KARS-207ENST00000566560 LGALS3P17931 250 aaKnown RBP7.35□□□□□ -1.23
KARS-207ENST00000566560 C9orf116Q5BN46 136 aaPredicted RBP7.35□□□□□ -1.23
KARS-207ENST00000566560 Q6ZSA8 131 aa7.35□□□□□ -1.23
KARS-207ENST00000566560 STPG4Q8N801 248 aa7.35□□□□□ -1.23
KARS-207ENST00000566560 J3QQQ9 107 aa7.34□□□□□ -1.23
KARS-207ENST00000566560 SCGB1D1O95968 90 aa7.34□□□□□ -1.23
KARS-207ENST00000566560 GAGE2BQ13066 116 aa7.34□□□□□ -1.23
KARS-207ENST00000566560 ZNF625Q96I27 306 aaPredicted RBP7.34□□□□□ -1.23
KARS-207ENST00000566560 NDUFA12Q9UI09 145 aa7.34□□□□□ -1.23
KARS-207ENST00000566560 LRP1BQ9NZR2 4599 aa7.34□□□□□ -1.24
KARS-207ENST00000566560 NDUFC2-KCTD14E9PQ53 114 aa7.33□□□□□ -1.24
KARS-207ENST00000566560 TLX1NBP0CAT3 122 aa7.33□□□□□ -1.24
KARS-207ENST00000566560 PTTG1IPP53801 180 aa7.33□□□□□ -1.24
KARS-207ENST00000566560 SPACA4Q8TDM5 124 aa7.33□□□□□ -1.24
KARS-207ENST00000566560 FAM30AQ9NZY2 134 aa7.33□□□□□ -1.24
KARS-207ENST00000566560 MYMXA0A1B0GTQ4 84 aa7.32□□□□□ -1.24
KARS-207ENST00000566560 PANO1I0J062 215 aa7.32□□□□□ -1.24
KARS-207ENST00000566560 NMUP48645 174 aa7.32□□□□□ -1.24
KARS-207ENST00000566560 HERV-K104P63124 156 aa7.32□□□□□ -1.24
KARS-207ENST00000566560 HAMPP81172 84 aa7.32□□□□□ -1.24
KARS-207ENST00000566560 CIRBPQ14011 172 aaKnown RBP7.32□□□□□ -1.24
KARS-207ENST00000566560 GAGE2EQ4V326 116 aa7.32□□□□□ -1.24
KARS-207ENST00000566560 Q6ZRP5 223 aa7.32□□□□□ -1.24
KARS-207ENST00000566560 LINC00474Q9P2X8 69 aa7.32□□□□□ -1.24
KARS-207ENST00000566560 GAGE2DQ9UEU5 116 aa7.32□□□□□ -1.24
KARS-207ENST00000566560 ERG28Q9UKR5 140 aa7.32□□□□□ -1.24
KARS-207ENST00000566560 IGKV2D-26A0A0A0MRZ7 120 aa7.31□□□□□ -1.24
KARS-207ENST00000566560 HSBP1L1C9JCN9 74 aa7.31□□□□□ -1.24
KARS-207ENST00000566560 CDK2AP2O75956 126 aa7.31□□□□□ -1.24
KARS-207ENST00000566560 MAJINQ3KP22 176 aa7.31□□□□□ -1.24
KARS-207ENST00000566560 MEIG1Q5JSS6 88 aa7.31□□□□□ -1.24
KARS-207ENST00000566560 SCXQ7RTU7 201 aa7.31□□□□□ -1.24
KARS-207ENST00000566560 PFN2P35080 140 aa7.3□□□□□ -1.24
KARS-207ENST00000566560 COX17Q14061 63 aa7.29□□□□□ -1.24
KARS-207ENST00000566560 DPH3Q96FX2 82 aa7.29□□□□□ -1.24
KARS-207ENST00000566560 A0A087WYN8 130 aa7.28□□□□□ -1.24
KARS-207ENST00000566560 A0A0U1RRA0 63 aa7.28□□□□□ -1.24
KARS-207ENST00000566560 ZNF815PA8K554 130 aa7.28□□□□□ -1.24
KARS-207ENST00000566560 XGP55808 180 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms