RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 TENM4Q6N022 2769 aa9.94□□□□□ -0.82
CDH1-209ENST00000566510 IBA57-AS1B1ANH7 110 aa9.94□□□□□ -0.82
CDH1-209ENST00000566510 LINC00643Q86TS7 51 aa9.94□□□□□ -0.82
CDH1-209ENST00000566510 C3orf56Q8N813 242 aa9.93□□□□□ -0.82
CDH1-209ENST00000566510 LECT2O14960 151 aa9.93□□□□□ -0.82
CDH1-209ENST00000566510 RNASE1P07998 156 aaKnown RBP9.93□□□□□ -0.82
CDH1-209ENST00000566510 FAM110AQ9BQ89 295 aa9.93□□□□□ -0.82
CDH1-209ENST00000566510 PPDPFQ9H3Y8 114 aa9.93□□□□□ -0.82
CDH1-209ENST00000566510 C14orf132Q9NPU4 83 aa9.92□□□□□ -0.82
CDH1-209ENST00000566510 HIVEP2P31629 2446 aa9.92□□□□□ -0.82
CDH1-209ENST00000566510 SS18Q15532 418 aa9.91□□□□□ -0.82
CDH1-209ENST00000566510 C9orf129Q5T035 196 aaKnown RBP9.91□□□□□ -0.82
CDH1-209ENST00000566510 C16orf95Q9H693 158 aa9.91□□□□□ -0.82
CDH1-209ENST00000566510 SLPIP03973 132 aa9.91□□□□□ -0.82
CDH1-209ENST00000566510 H0YGX0 51 aa9.9□□□□□ -0.82
CDH1-209ENST00000566510 IMUPQ9GZP8 106 aa9.9□□□□□ -0.82
CDH1-209ENST00000566510 PDZD2O15018 2839 aa9.89□□□□□ -0.83
CDH1-209ENST00000566510 PRR3P79522 188 aaKnown RBP9.88□□□□□ -0.83
CDH1-209ENST00000566510 KRTAP1-1Q07627 177 aa9.88□□□□□ -0.83
CDH1-209ENST00000566510 VWFP04275 2813 aa9.88□□□□□ -0.83
CDH1-209ENST00000566510 NCR3O14931 201 aa9.88□□□□□ -0.83
CDH1-209ENST00000566510 DEFB4AO15263 64 aa9.88□□□□□ -0.83
CDH1-209ENST00000566510 IGLV10-54A0A075B6I4 117 aa9.87□□□□□ -0.83
CDH1-209ENST00000566510 KIR2DL5BQ8NHK3 375 aa9.87□□□□□ -0.83
CDH1-209ENST00000566510 LINC00269Q8N2A0 174 aa9.86□□□□□ -0.83
CDH1-209ENST00000566510 SDIM1Q6ZPB5 146 aa9.86□□□□□ -0.83
CDH1-209ENST00000566510 PRO0255Q9UI72 69 aa9.86□□□□□ -0.83
CDH1-209ENST00000566510 Q8IZM0 81 aa9.85□□□□□ -0.83
CDH1-209ENST00000566510 LINC00482Q8N8I6 264 aa9.85□□□□□ -0.83
CDH1-209ENST00000566510 A0A1B0GUV1 79 aa9.84□□□□□ -0.83
CDH1-209ENST00000566510 Q8N3U1 123 aa9.84□□□□□ -0.83
CDH1-209ENST00000566510 ANGP03950 147 aaKnown RBP9.83□□□□□ -0.84
CDH1-209ENST00000566510 SMIM20Q8N5G0 67 aa9.83□□□□□ -0.84
CDH1-209ENST00000566510 ORMDL1Q9P0S3 153 aa9.83□□□□□ -0.84
CDH1-209ENST00000566510 X6R8D5 127 aa9.83□□□□□ -0.84
CDH1-209ENST00000566510 IGKV3D-7A0A0C4DH55 119 aa9.83□□□□□ -0.84
CDH1-209ENST00000566510 HILS1P60008 231 aa9.83□□□□□ -0.84
CDH1-209ENST00000566510 SMR3AQ99954 134 aa9.83□□□□□ -0.84
CDH1-209ENST00000566510 ANK3Q12955 4377 aaKnown RBP9.83□□□□□ -0.84
CDH1-209ENST00000566510 FASNP49327 2511 aaKnown RBP9.82□□□□□ -0.84
CDH1-209ENST00000566510 C9orf116Q5BN46 136 aaPredicted RBP9.82□□□□□ -0.84
CDH1-209ENST00000566510 NOTCH2Q04721 2471 aa9.82□□□□□ -0.84
CDH1-209ENST00000566510 KRTAP10-3P60369 221 aa9.82□□□□□ -0.84
CDH1-209ENST00000566510 LINC00846Q9NV44 126 aa9.82□□□□□ -0.84
CDH1-209ENST00000566510 KLK5Q9Y337 293 aaPredicted RBP9.82□□□□□ -0.84
CDH1-209ENST00000566510 DEFB135Q30KP9 77 aa9.81□□□□□ -0.84
CDH1-209ENST00000566510 C9orf153Q5TBE3 101 aa9.81□□□□□ -0.84
CDH1-209ENST00000566510 CXCL5P42830 114 aa9.81□□□□□ -0.84
CDH1-209ENST00000566510 CHCHD10Q8WYQ3 142 aaPredicted RBP9.81□□□□□ -0.84
CDH1-209ENST00000566510 HELZ2Q9BYK8 2649 aaKnown RBP9.81□□□□□ -0.84
CDH1-209ENST00000566510 LINC00612Q8N6U2 182 aa9.8□□□□□ -0.84
CDH1-209ENST00000566510 LY6G6DO95868 133 aa9.79□□□□□ -0.84
CDH1-209ENST00000566510 REG3AQ06141 175 aa9.79□□□□□ -0.84
CDH1-209ENST00000566510 CD164L2Q6UWJ8 174 aa9.79□□□□□ -0.84
CDH1-209ENST00000566510 UNC79Q9P2D8 2635 aa9.79□□□□□ -0.84
CDH1-209ENST00000566510 C3orf22Q8N5N4 141 aa9.79□□□□□ -0.84
CDH1-209ENST00000566510 SMIM9A6NGZ8 99 aa9.78□□□□□ -0.84
CDH1-209ENST00000566510 HTN3P15516 51 aa9.78□□□□□ -0.84
CDH1-209ENST00000566510 SPATA3Q8NHX4 192 aa9.78□□□□□ -0.84
CDH1-209ENST00000566510 OBSCN-AS1Q96MR7 158 aa9.78□□□□□ -0.84
CDH1-209ENST00000566510 UQCRQO14949 82 aa9.77□□□□□ -0.85
CDH1-209ENST00000566510 NANOS2P60321 138 aaKnown RBP9.77□□□□□ -0.85
CDH1-209ENST00000566510 KIAA0087Q14695 138 aa9.77□□□□□ -0.85
CDH1-209ENST00000566510 Q8N814 137 aa9.77□□□□□ -0.85
CDH1-209ENST00000566510 LINC00526Q96FQ7 95 aa9.77□□□□□ -0.85
CDH1-209ENST00000566510 TMEM126AQ9H061 195 aa9.77□□□□□ -0.85
CDH1-209ENST00000566510 DAD1P61803 113 aa9.76□□□□□ -0.85
CDH1-209ENST00000566510 A0A087WVE0 104 aa9.76□□□□□ -0.85
CDH1-209ENST00000566510 S100A7L2Q5SY68 101 aa9.76□□□□□ -0.85
CDH1-209ENST00000566510 LYRM9A8MSI8 78 aa9.75□□□□□ -0.85
CDH1-209ENST00000566510 LINC01561Q8N1V8 128 aa9.75□□□□□ -0.85
CDH1-209ENST00000566510 TENM1Q9UKZ4 2725 aa9.74□□□□□ -0.85
CDH1-209ENST00000566510 COX17Q14061 63 aa9.74□□□□□ -0.85
CDH1-209ENST00000566510 C6orf99Q4VX62 202 aa9.74□□□□□ -0.85
CDH1-209ENST00000566510 C6orf223Q8N319 242 aa9.74□□□□□ -0.85
CDH1-209ENST00000566510 IGHV4-28A0A0C4DH34 117 aa9.73□□□□□ -0.85
CDH1-209ENST00000566510 HIST1H4AP62805 103 aaKnown RBP9.73□□□□□ -0.85
CDH1-209ENST00000566510 TMEM256-PLSCR3K7ERE1 68 aa9.73□□□□□ -0.85
CDH1-209ENST00000566510 CCKP06307 115 aa9.73□□□□□ -0.85
CDH1-209ENST00000566510 ATOX1O00244 68 aa9.72□□□□□ -0.85
CDH1-209ENST00000566510 NDUFC2O95298 119 aa9.72□□□□□ -0.85
CDH1-209ENST00000566510 COX7CP15954 63 aa9.72□□□□□ -0.85
CDH1-209ENST00000566510 Q6JHZ5 121 aa9.72□□□□□ -0.85
CDH1-209ENST00000566510 UNQ6190/PRO20217Q6UXQ8 127 aa9.72□□□□□ -0.85
CDH1-209ENST00000566510 Q8NDZ9 215 aa9.72□□□□□ -0.85
CDH1-209ENST00000566510 A0A1B0GX51 115 aa9.72□□□□□ -0.85
CDH1-209ENST00000566510 CELA1Q9UNI1 258 aa9.72□□□□□ -0.85
CDH1-209ENST00000566510 ATRQ13535 2644 aa9.72□□□□□ -0.85
CDH1-209ENST00000566510 JMJD7-PLA2G4BH0Y9G9 81 aa9.71□□□□□ -0.85
CDH1-209ENST00000566510 C10orf25Q5T742 122 aa9.71□□□□□ -0.85
CDH1-209ENST00000566510 HECTD1Q9ULT8 2610 aa9.7□□□□□ -0.86
CDH1-209ENST00000566510 RPL18AQ02543 176 aaKnown RBP9.7□□□□□ -0.86
CDH1-209ENST00000566510 SPAG11BQ08648 103 aa9.7□□□□□ -0.86
CDH1-209ENST00000566510 C9orf66Q5T8R8 295 aa9.7□□□□□ -0.86
CDH1-209ENST00000566510 KLK12Q9UKR0 248 aa9.69□□□□□ -0.86
CDH1-209ENST00000566510 APOC4P55056 127 aa9.69□□□□□ -0.86
CDH1-209ENST00000566510 WFDC9Q8NEX5 89 aa9.69□□□□□ -0.86
CDH1-209ENST00000566510 LINC00167Q96N53 147 aa9.69□□□□□ -0.86
CDH1-209ENST00000566510 C2orf48Q96LS8 159 aa9.69□□□□□ -0.86
CDH1-209ENST00000566510 CYSRT1A8MQ03 144 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms