RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 C2orf82Q6UX34 121 aa10.22□□□□□ -0.77
RAB40C-208ENST00000564703 TRBV30A0A0K0K1B3 111 aa10.21□□□□□ -0.77
RAB40C-208ENST00000564703 CHTF8P0CG12 524 aa10.21□□□□□ -0.77
RAB40C-208ENST00000564703 ZNF22P17026 224 aaPredicted RBP10.21□□□□□ -0.77
RAB40C-208ENST00000564703 COX7B2Q8TF08 81 aa10.21□□□□□ -0.77
RAB40C-208ENST00000564703 C11orf86A6NJI1 115 aa10.2□□□□□ -0.78
RAB40C-208ENST00000564703 EPM2AB3EWF7 344 aa10.2□□□□□ -0.78
RAB40C-208ENST00000564703 F8VRH5 84 aa10.2□□□□□ -0.78
RAB40C-208ENST00000564703 CXCL5P42830 114 aa10.2□□□□□ -0.78
RAB40C-208ENST00000564703 RPL18AQ02543 176 aaKnown RBP10.2□□□□□ -0.78
RAB40C-208ENST00000564703 C10orf25Q5T742 122 aa10.2□□□□□ -0.78
RAB40C-208ENST00000564703 MAP1LC3CQ9BXW4 147 aa10.2□□□□□ -0.78
RAB40C-208ENST00000564703 A0A096LNI7 61 aa10.19□□□□□ -0.78
RAB40C-208ENST00000564703 PANO1I0J062 215 aa10.19□□□□□ -0.78
RAB40C-208ENST00000564703 CIRBPQ14011 172 aaKnown RBP10.19□□□□□ -0.78
RAB40C-208ENST00000564703 SPACA4Q8TDM5 124 aa10.19□□□□□ -0.78
RAB40C-208ENST00000564703 C6orf48Q9UBA6 75 aa10.19□□□□□ -0.78
RAB40C-208ENST00000564703 A0A087WYN8 130 aa10.18□□□□□ -0.78
RAB40C-208ENST00000564703 PTTG1IPP53801 180 aa10.18□□□□□ -0.78
RAB40C-208ENST00000564703 STPG4Q8N801 248 aa10.18□□□□□ -0.78
RAB40C-208ENST00000564703 LRP1BQ9NZR2 4599 aa10.18□□□□□ -0.78
RAB40C-208ENST00000564703 DNAH5Q8TE73 4624 aa10.18□□□□□ -0.78
RAB40C-208ENST00000564703 COA6Q5JTJ3 125 aaKnown RBP10.16□□□□□ -0.78
RAB40C-208ENST00000564703 PLA2G1BP04054 148 aaKnown RBP10.15□□□□□ -0.78
RAB40C-208ENST00000564703 TLX1NBP0CAT3 122 aa10.15□□□□□ -0.78
RAB40C-208ENST00000564703 ODF1Q14990 250 aa10.15□□□□□ -0.78
RAB40C-208ENST00000564703 LINC00528Q8N1L1 170 aa10.15□□□□□ -0.78
RAB40C-208ENST00000564703 IGLV5-39A0A0G2JS06 123 aa10.14□□□□□ -0.79
RAB40C-208ENST00000564703 NDUFC2-KCTD14E9PQ53 114 aa10.14□□□□□ -0.79
RAB40C-208ENST00000564703 PLNP26678 52 aa10.14□□□□□ -0.79
RAB40C-208ENST00000564703 GAGE2EQ4V326 116 aa10.14□□□□□ -0.79
RAB40C-208ENST00000564703 C9orf116Q5BN46 136 aaPredicted RBP10.14□□□□□ -0.79
RAB40C-208ENST00000564703 Q5VSD8 79 aa10.14□□□□□ -0.79
RAB40C-208ENST00000564703 PLAC8Q9NZF1 115 aa10.14□□□□□ -0.79
RAB40C-208ENST00000564703 GAGE2DQ9UEU5 116 aa10.14□□□□□ -0.79
RAB40C-208ENST00000564703 RYR1P21817 5038 aa10.14□□□□□ -0.79
RAB40C-208ENST00000564703 TMEM223A0PJW6 202 aa10.13□□□□□ -0.79
RAB40C-208ENST00000564703 DPM2O94777 84 aa10.13□□□□□ -0.79
RAB40C-208ENST00000564703 Q6ZRP5 223 aa10.13□□□□□ -0.79
RAB40C-208ENST00000564703 SFTA2Q6UW10 78 aa10.12□□□□□ -0.79
RAB40C-208ENST00000564703 C7orf33Q8WU49 177 aa10.12□□□□□ -0.79
RAB40C-208ENST00000564703 SYS1-DBNDD2H3BUS1 97 aa10.11□□□□□ -0.79
RAB40C-208ENST00000564703 IGKCP01834 107 aa10.11□□□□□ -0.79
RAB40C-208ENST00000564703 S100A6P06703 90 aa10.11□□□□□ -0.79
RAB40C-208ENST00000564703 HERVK_113P61574 105 aa10.1□□□□□ -0.79
RAB40C-208ENST00000564703 PMCHL2Q9BQD1 86 aa10.1□□□□□ -0.79
RAB40C-208ENST00000564703 PET117Q6UWS5 81 aa10.09□□□□□ -0.79
RAB40C-208ENST00000564703 KRTAP17-1Q9BYP8 105 aa10.09□□□□□ -0.79
RAB40C-208ENST00000564703 A0A1W2PNN7 141 aa10.07□□□□□ -0.8
RAB40C-208ENST00000564703 S100A2P29034 98 aa10.07□□□□□ -0.8
RAB40C-208ENST00000564703 KRTDAPP60985 99 aa10.07□□□□□ -0.8
RAB40C-208ENST00000564703 RPL37AP61513 92 aaKnown RBP10.07□□□□□ -0.8
RAB40C-208ENST00000564703 ZNF625Q96I27 306 aaPredicted RBP10.07□□□□□ -0.8
RAB40C-208ENST00000564703 KRTAP4-5Q9BYR2 181 aa10.07□□□□□ -0.8
RAB40C-208ENST00000564703 HERC2O95714 4834 aa10.07□□□□□ -0.8
RAB40C-208ENST00000564703 APOBP04114 4563 aaKnown RBP10.06□□□□□ -0.8
RAB40C-208ENST00000564703 C3orf79P0CE67 100 aa10.06□□□□□ -0.8
RAB40C-208ENST00000564703 PFN2P35080 140 aa10.06□□□□□ -0.8
RAB40C-208ENST00000564703 PLEKHB2Q96CS7 222 aa10.06□□□□□ -0.8
RAB40C-208ENST00000564703 LEPROTO15243 131 aa10.05□□□□□ -0.8
RAB40C-208ENST00000564703 COX17Q14061 63 aa10.05□□□□□ -0.8
RAB40C-208ENST00000564703 ERG28Q9UKR5 140 aa10.05□□□□□ -0.8
RAB40C-208ENST00000564703 C20orf202A1L168 122 aa10.04□□□□□ -0.8
RAB40C-208ENST00000564703 INAFM2P0DMQ5 153 aa10.04□□□□□ -0.8
RAB40C-208ENST00000564703 XAGE1AQ9HD64 81 aa10.04□□□□□ -0.8
RAB40C-208ENST00000564703 MYMXA0A1B0GTQ4 84 aa10.03□□□□□ -0.8
RAB40C-208ENST00000564703 LINC00587B1AMM8 73 aa10.03□□□□□ -0.8
RAB40C-208ENST00000564703 HERV-K104P63124 156 aa10.03□□□□□ -0.8
RAB40C-208ENST00000564703 C9orf129Q5T035 196 aaKnown RBP10.03□□□□□ -0.8
RAB40C-208ENST00000564703 LINC01545Q5VT33 79 aa10.03□□□□□ -0.8
RAB40C-208ENST00000564703 FAM19A5Q7Z5A7 132 aaPredicted RBP10.03□□□□□ -0.8
RAB40C-208ENST00000564703 NDUFA12Q9UI09 145 aa10.03□□□□□ -0.8
RAB40C-208ENST00000564703 HSPG2P98160 4391 aa10.03□□□□□ -0.8
RAB40C-208ENST00000564703 FAM168BA1KXE4 195 aa10.02□□□□□ -0.81
RAB40C-208ENST00000564703 LGALS3P17931 250 aaKnown RBP10.02□□□□□ -0.81
RAB40C-208ENST00000564703 AKR1D1P51857 326 aa10.02□□□□□ -0.81
RAB40C-208ENST00000564703 LINC00158P58513 81 aa10.02□□□□□ -0.81
RAB40C-208ENST00000564703 J3QQQ9 107 aa10.01□□□□□ -0.81
RAB40C-208ENST00000564703 MEIG1Q5JSS6 88 aa10.01□□□□□ -0.81
RAB40C-208ENST00000564703 HIST3H2BBQ8N257 126 aa10.01□□□□□ -0.81
RAB40C-208ENST00000564703 DNAH8Q96JB1 4490 aa10□□□□□ -0.81
RAB40C-208ENST00000564703 PHF5AQ7RTV0 110 aaKnown RBP10□□□□□ -0.81
RAB40C-208ENST00000564703 NMUP48645 174 aa9.99□□□□□ -0.81
RAB40C-208ENST00000564703 SNRPEP62304 92 aaKnown RBP9.99□□□□□ -0.81
RAB40C-208ENST00000564703 A0A0U1RRA0 63 aa9.98□□□□□ -0.81
RAB40C-208ENST00000564703 E9PLD3 99 aa9.98□□□□□ -0.81
RAB40C-208ENST00000564703 M0QXV9 152 aa9.98□□□□□ -0.81
RAB40C-208ENST00000564703 UBE2BP63146 152 aa9.98□□□□□ -0.81
RAB40C-208ENST00000564703 LBHQ53QV2 105 aaPredicted RBP9.98□□□□□ -0.81
RAB40C-208ENST00000564703 HIST1H2BLQ99880 126 aa9.98□□□□□ -0.81
RAB40C-208ENST00000564703 SND1-IT1Q9HBX3 110 aa9.96□□□□□ -0.82
RAB40C-208ENST00000564703 PLA2G2DQ9UNK4 145 aa9.96□□□□□ -0.82
RAB40C-208ENST00000564703 C22orf24Q9Y442 160 aa9.96□□□□□ -0.82
RAB40C-208ENST00000564703 SMIM13P0DJ93 91 aa9.95□□□□□ -0.82
RAB40C-208ENST00000564703 TSPEAR-AS2P59090 65 aa9.95□□□□□ -0.82
RAB40C-208ENST00000564703 RPL24P83731 157 aaKnown RBP9.95□□□□□ -0.82
RAB40C-208ENST00000564703 SERTAD4-AS1Q5TG53 156 aa9.95□□□□□ -0.82
RAB40C-208ENST00000564703 NKAPP1Q8N9T2 125 aa9.95□□□□□ -0.82
RAB40C-208ENST00000564703 KRTAP10-4P60372 401 aaPredicted RBP9.94□□□□□ -0.82
RAB40C-208ENST00000564703 KRTAP7-1Q8IUC3 87 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms