RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 CD164L2Q6UWJ8 174 aa13.38□□□□□ -0.27
CDH5-204ENST00000563425 Q8IZM0 81 aa13.38□□□□□ -0.27
CDH5-204ENST00000563425 CARD19Q96LW7 228 aa13.38□□□□□ -0.27
CDH5-204ENST00000563425 REG3AQ06141 175 aa13.37□□□□□ -0.27
CDH5-204ENST00000563425 LST1O00453 97 aa13.37□□□□□ -0.27
CDH5-204ENST00000563425 CLEC2BQ92478 149 aa13.37□□□□□ -0.27
CDH5-204ENST00000563425 TRBV10-2A0A0K0K1G8 114 aa13.36□□□□□ -0.27
CDH5-204ENST00000563425 CHCHD10Q8WYQ3 142 aaPredicted RBP13.36□□□□□ -0.27
CDH5-204ENST00000563425 RETNQ9HD89 108 aa13.36□□□□□ -0.27
CDH5-204ENST00000563425 STAB1Q9NY15 2570 aa13.35□□□□□ -0.27
CDH5-204ENST00000563425 SND1-IT1Q9HBX3 110 aa13.35□□□□□ -0.27
CDH5-204ENST00000563425 FBN1P35555 2871 aaKnown RBP13.34□□□□□ -0.27
CDH5-204ENST00000563425 COX7A2LO14548 114 aa13.34□□□□□ -0.27
CDH5-204ENST00000563425 C11orf68Q9H3H3 251 aaKnown RBP13.34□□□□□ -0.27
CDH5-204ENST00000563425 GAGE12HA6NDE8 117 aa13.33□□□□□ -0.28
CDH5-204ENST00000563425 PFN2P35080 140 aa13.33□□□□□ -0.28
CDH5-204ENST00000563425 CCL18P55774 89 aa13.33□□□□□ -0.28
CDH5-204ENST00000563425 SPATA25Q9BR10 227 aa13.33□□□□□ -0.28
CDH5-204ENST00000563425 TRAV13-2A0A0B4J235 113 aa13.33□□□□□ -0.28
CDH5-204ENST00000563425 PKD1L1Q8TDX9 2849 aa13.32□□□□□ -0.28
CDH5-204ENST00000563425 IGLV10-54A0A075B6I4 117 aa13.32□□□□□ -0.28
CDH5-204ENST00000563425 IGKV2-28A0A075B6P5 120 aa13.31□□□□□ -0.28
CDH5-204ENST00000563425 IGKV2D-28P01615 120 aa13.31□□□□□ -0.28
CDH5-204ENST00000563425 KIAA0087Q14695 138 aa13.31□□□□□ -0.28
CDH5-204ENST00000563425 LYPD5Q6UWN5 251 aa13.31□□□□□ -0.28
CDH5-204ENST00000563425 H3BNG1 76 aa13.3□□□□□ -0.28
CDH5-204ENST00000563425 CRPP02741 224 aa13.3□□□□□ -0.28
CDH5-204ENST00000563425 C2orf82Q6UX34 121 aa13.3□□□□□ -0.28
CDH5-204ENST00000563425 LINC00337Q8N6G1 96 aa13.3□□□□□ -0.28
CDH5-204ENST00000563425 H3BT86 120 aa13.29□□□□□ -0.28
CDH5-204ENST00000563425 CKS1BP61024 79 aa13.29□□□□□ -0.28
CDH5-204ENST00000563425 PRR34Q9NV39 138 aa13.29□□□□□ -0.28
CDH5-204ENST00000563425 CMYA5Q8N3K9 4069 aa13.28□□□□□ -0.28
CDH5-204ENST00000563425 MALP21145 153 aa13.28□□□□□ -0.28
CDH5-204ENST00000563425 CXCL5P42830 114 aa13.28□□□□□ -0.28
CDH5-204ENST00000563425 NTN5Q8WTR8 489 aaPredicted RBP13.28□□□□□ -0.28
CDH5-204ENST00000563425 RPL28P46779 137 aaKnown RBP13.27□□□□□ -0.29
CDH5-204ENST00000563425 CFAP161Q6P656 301 aa13.27□□□□□ -0.29
CDH5-204ENST00000563425 KLK12Q9UKR0 248 aa13.26□□□□□ -0.29
CDH5-204ENST00000563425 KPRPQ5T749 579 aaPredicted RBP13.25□□□□□ -0.29
CDH5-204ENST00000563425 Q6ZTC4 211 aa13.25□□□□□ -0.29
CDH5-204ENST00000563425 SIGMAR1Q99720 223 aa13.25□□□□□ -0.29
CDH5-204ENST00000563425 MAST4O15021 2626 aa13.24□□□□□ -0.29
CDH5-204ENST00000563425 C21orf62-AS1Q17RA5 79 aa13.24□□□□□ -0.29
CDH5-204ENST00000563425 CDIP1Q9H305 208 aa13.24□□□□□ -0.29
CDH5-204ENST00000563425 KLK5Q9Y337 293 aaPredicted RBP13.24□□□□□ -0.29
CDH5-204ENST00000563425 COX17Q14061 63 aa13.23□□□□□ -0.29
CDH5-204ENST00000563425 ENHOQ6UWT2 76 aa13.23□□□□□ -0.29
CDH5-204ENST00000563425 UBE2WQ96B02 151 aa13.22□□□□□ -0.29
CDH5-204ENST00000563425 TEX49A0A1B0GTD5 131 aa13.21□□□□□ -0.29
CDH5-204ENST00000563425 TRACP01848 142 aa13.21□□□□□ -0.29
CDH5-204ENST00000563425 TENM3Q9P273 2699 aa13.21□□□□□ -0.29
CDH5-204ENST00000563425 SMIM11BQ8TCY0 68 aa13.21□□□□□ -0.3
CDH5-204ENST00000563425 DNAH3Q8TD57 4116 aa13.2□□□□□ -0.3
CDH5-204ENST00000563425 A0A0J9YWU9 116 aa13.2□□□□□ -0.3
CDH5-204ENST00000563425 FAM218AQ96MZ4 157 aa13.19□□□□□ -0.3
CDH5-204ENST00000563425 ANK2Q01484 3957 aa13.18□□□□□ -0.3
CDH5-204ENST00000563425 SPAG11BQ08648 103 aa13.18□□□□□ -0.3
CDH5-204ENST00000563425 WFDC10BQ8IUB3 73 aa13.18□□□□□ -0.3
CDH5-204ENST00000563425 TRAV8-4A0A0B4J246 113 aa13.17□□□□□ -0.3
CDH5-204ENST00000563425 BAHCC1Q9P281 2608 aa13.17□□□□□ -0.3
CDH5-204ENST00000563425 NANOS2P60321 138 aaKnown RBP13.17□□□□□ -0.3
CDH5-204ENST00000563425 C9orf116Q5BN46 136 aaPredicted RBP13.17□□□□□ -0.3
CDH5-204ENST00000563425 CYSRT1A8MQ03 144 aa13.16□□□□□ -0.3
CDH5-204ENST00000563425 OR13C6PQ8NH95 151 aa13.15□□□□□ -0.3
CDH5-204ENST00000563425 C11orf45Q8TAV5 145 aa13.15□□□□□ -0.3
CDH5-204ENST00000563425 NDUFC2O95298 119 aa13.15□□□□□ -0.3
CDH5-204ENST00000563425 C6orf223Q8N319 242 aa13.15□□□□□ -0.3
CDH5-204ENST00000563425 DEFB131BA0A096LNP1 70 aa13.14□□□□□ -0.31
CDH5-204ENST00000563425 ESRGQ1W209 222 aa13.14□□□□□ -0.31
CDH5-204ENST00000563425 DEFB121Q5J5C9 76 aa13.14□□□□□ -0.31
CDH5-204ENST00000563425 C10orf25Q5T742 122 aa13.14□□□□□ -0.31
CDH5-204ENST00000563425 UNQ6190/PRO20217Q6UXQ8 127 aa13.14□□□□□ -0.31
CDH5-204ENST00000563425 H0YGX0 51 aa13.13□□□□□ -0.31
CDH5-204ENST00000563425 MUC7Q8TAX7 377 aa13.13□□□□□ -0.31
CDH5-204ENST00000563425 COL6A5A8TX70 2615 aa13.12□□□□□ -0.31
CDH5-204ENST00000563425 BAALC-AS2P0C853 105 aa13.11□□□□□ -0.31
CDH5-204ENST00000563425 SCGB1A1P11684 91 aa13.11□□□□□ -0.31
CDH5-204ENST00000563425 LINC00526Q96FQ7 95 aa13.11□□□□□ -0.31
CDH5-204ENST00000563425 NOTCH1P46531 2555 aa13.11□□□□□ -0.31
CDH5-204ENST00000563425 XGP55808 180 aa13.11□□□□□ -0.31
CDH5-204ENST00000563425 PRR3P79522 188 aaKnown RBP13.1□□□□□ -0.31
CDH5-204ENST00000563425 KRTAP26-1Q6PEX3 210 aa13.09□□□□□ -0.31
CDH5-204ENST00000563425 A0A087WYN8 130 aa13.09□□□□□ -0.31
CDH5-204ENST00000563425 GVQW2A0A096LPI5 108 aaPredicted RBP13.09□□□□□ -0.31
CDH5-204ENST00000563425 MT-ATP8P03928 68 aa13.08□□□□□ -0.32
CDH5-204ENST00000563425 Q9HAA7 133 aa13.08□□□□□ -0.32
CDH5-204ENST00000563425 C22orf24Q9Y442 160 aa13.08□□□□□ -0.32
CDH5-204ENST00000563425 Q8NDZ9 215 aa13.07□□□□□ -0.32
CDH5-204ENST00000563425 PRB2P02812 416 aaPredicted RBP13.06□□□□□ -0.32
CDH5-204ENST00000563425 TMEM126AQ9H061 195 aa13.06□□□□□ -0.32
CDH5-204ENST00000563425 LINC01556Q5JQF7 62 aa13.05□□□□□ -0.32
CDH5-204ENST00000563425 TM2D3Q9BRN9 247 aa13.05□□□□□ -0.32
CDH5-204ENST00000563425 DNAL4O96015 105 aa13.05□□□□□ -0.32
CDH5-204ENST00000563425 C6orf48Q9UBA6 75 aa13.04□□□□□ -0.32
CDH5-204ENST00000563425 FAM240AA0A1B0GVK7 77 aa13.03□□□□□ -0.32
CDH5-204ENST00000563425 K7EIL1 84 aa13.03□□□□□ -0.32
CDH5-204ENST00000563425 NBEAL1Q6ZS30 2694 aa13.03□□□□□ -0.32
CDH5-204ENST00000563425 NCR3O14931 201 aa13.02□□□□□ -0.32
CDH5-204ENST00000563425 LECT2O14960 151 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms