RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 COX7B2Q8TF08 81 aa6.59□□□□□ -1.35
UBFD1-202ENST00000563366 COPS9Q8WXC6 57 aa6.59□□□□□ -1.35
UBFD1-202ENST00000563366 CHCHD10Q8WYQ3 142 aaPredicted RBP6.59□□□□□ -1.35
UBFD1-202ENST00000563366 UPK3BQ9BT76 320 aa6.59□□□□□ -1.35
UBFD1-202ENST00000563366 TM2D2Q9BX73 214 aa6.59□□□□□ -1.35
UBFD1-202ENST00000563366 A0A0J9YXY3 114 aa6.58□□□□□ -1.36
UBFD1-202ENST00000563366 IGHV3-30P01768 117 aa6.58□□□□□ -1.36
UBFD1-202ENST00000563366 IGHV3-33P01772 117 aa6.58□□□□□ -1.36
UBFD1-202ENST00000563366 PRSS2P07478 247 aa6.58□□□□□ -1.36
UBFD1-202ENST00000563366 IGHV3-30-5P0DP03 117 aa6.58□□□□□ -1.36
UBFD1-202ENST00000563366 CXCL5P42830 114 aa6.58□□□□□ -1.36
UBFD1-202ENST00000563366 Q8IZM0 81 aa6.58□□□□□ -1.36
UBFD1-202ENST00000563366 C10orf126Q8N4M7 172 aa6.58□□□□□ -1.36
UBFD1-202ENST00000563366 COL7A1Q02388 2944 aa6.58□□□□□ -1.36
UBFD1-202ENST00000563366 C5orf38Q86SI9 138 aa6.57□□□□□ -1.36
UBFD1-202ENST00000563366 LINC00476Q8WZB0 136 aa6.57□□□□□ -1.36
UBFD1-202ENST00000563366 UBE2WQ96B02 151 aa6.57□□□□□ -1.36
UBFD1-202ENST00000563366 Q9H8V8 135 aa6.57□□□□□ -1.36
UBFD1-202ENST00000563366 IGLV10-54A0A075B6I4 117 aa6.56□□□□□ -1.36
UBFD1-202ENST00000563366 RPL24P83731 157 aaKnown RBP6.56□□□□□ -1.36
UBFD1-202ENST00000563366 C6orf226Q5I0X4 101 aa6.56□□□□□ -1.36
UBFD1-202ENST00000563366 CFAP161Q6P656 301 aa6.56□□□□□ -1.36
UBFD1-202ENST00000563366 ENHOQ6UWT2 76 aa6.56□□□□□ -1.36
UBFD1-202ENST00000563366 ZNF625Q96I27 306 aaPredicted RBP6.56□□□□□ -1.36
UBFD1-202ENST00000563366 SPANXDQ9BXN6 97 aa6.56□□□□□ -1.36
UBFD1-202ENST00000563366 SPANXCQ9NY87 97 aa6.56□□□□□ -1.36
UBFD1-202ENST00000563366 TOMM7Q9P0U1 55 aa6.56□□□□□ -1.36
UBFD1-202ENST00000563366 LINC00588Q9Y4M8 146 aa6.56□□□□□ -1.36
UBFD1-202ENST00000563366 DNAH9Q9NYC9 4486 aa6.55□□□□□ -1.36
UBFD1-202ENST00000563366 IFITM1P13164 125 aa6.55□□□□□ -1.36
UBFD1-202ENST00000563366 FOXI1Q12951 378 aa6.55□□□□□ -1.36
UBFD1-202ENST00000563366 MEIG1Q5JSS6 88 aa6.55□□□□□ -1.36
UBFD1-202ENST00000563366 RMI2Q96E14 147 aa6.55□□□□□ -1.36
UBFD1-202ENST00000563366 STAB2Q8WWQ8 2551 aa6.54□□□□□ -1.36
UBFD1-202ENST00000563366 CKS1BP61024 79 aa6.54□□□□□ -1.36
UBFD1-202ENST00000563366 UBE2DNLQ8IWF7 75 aa6.54□□□□□ -1.36
UBFD1-202ENST00000563366 PPDPFQ9H3Y8 114 aa6.54□□□□□ -1.36
UBFD1-202ENST00000563366 MEGF8Q7Z7M0 2845 aa6.53□□□□□ -1.36
UBFD1-202ENST00000563366 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.53□□□□□ -1.36
UBFD1-202ENST00000563366 IBA57-AS1B1ANH7 110 aa6.53□□□□□ -1.36
UBFD1-202ENST00000563366 SMIM13P0DJ93 91 aa6.53□□□□□ -1.36
UBFD1-202ENST00000563366 FXYD2P54710 66 aa6.53□□□□□ -1.36
UBFD1-202ENST00000563366 APLNQ9ULZ1 77 aa6.53□□□□□ -1.36
UBFD1-202ENST00000563366 COX11Q9Y6N1 276 aa6.53□□□□□ -1.36
UBFD1-202ENST00000563366 DNHD1Q96M86 4753 aa6.52□□□□□ -1.37
UBFD1-202ENST00000563366 COX17Q14061 63 aa6.52□□□□□ -1.37
UBFD1-202ENST00000563366 MUC7Q8TAX7 377 aa6.52□□□□□ -1.37
UBFD1-202ENST00000563366 LITAFQ99732 161 aa6.52□□□□□ -1.37
UBFD1-202ENST00000563366 NHP2Q9NX24 153 aaKnown RBP6.52□□□□□ -1.37
UBFD1-202ENST00000563366 F8WDY8 70 aa6.51□□□□□ -1.37
UBFD1-202ENST00000563366 SPAG11BQ08648 103 aa6.51□□□□□ -1.37
UBFD1-202ENST00000563366 LCE4AQ5TA78 99 aa6.51□□□□□ -1.37
UBFD1-202ENST00000563366 IGKV2D-24A0A075B6R9 120 aa6.5□□□□□ -1.37
UBFD1-202ENST00000563366 A0A1B0GWB2 263 aa6.5□□□□□ -1.37
UBFD1-202ENST00000563366 KRTAP9-7A8MTY7 169 aa6.5□□□□□ -1.37
UBFD1-202ENST00000563366 KRTAP10-2P60368 255 aa6.5□□□□□ -1.37
UBFD1-202ENST00000563366 TTC32Q5I0X7 151 aa6.5□□□□□ -1.37
UBFD1-202ENST00000563366 A0A0B4J2C4 111 aa6.49□□□□□ -1.37
UBFD1-202ENST00000563366 TAX1BP3O14907 124 aa6.49□□□□□ -1.37
UBFD1-202ENST00000563366 KIAA0087Q14695 138 aa6.49□□□□□ -1.37
UBFD1-202ENST00000563366 MUSTN1Q8IVN3 82 aa6.49□□□□□ -1.37
UBFD1-202ENST00000563366 ERG28Q9UKR5 140 aa6.49□□□□□ -1.37
UBFD1-202ENST00000563366 A4D1N5 150 aa6.48□□□□□ -1.37
UBFD1-202ENST00000563366 LINC00158P58513 81 aa6.48□□□□□ -1.37
UBFD1-202ENST00000563366 ADAMTSL4-AS1Q5T5F5 129 aa6.48□□□□□ -1.37
UBFD1-202ENST00000563366 KRTAP26-1Q6PEX3 210 aa6.48□□□□□ -1.37
UBFD1-202ENST00000563366 LINC00308Q8TCZ7 52 aa6.48□□□□□ -1.37
UBFD1-202ENST00000563366 RAB37Q96AX2 223 aa6.48□□□□□ -1.37
UBFD1-202ENST00000563366 Q9HAA7 133 aa6.48□□□□□ -1.37
UBFD1-202ENST00000563366 GVQW2A0A096LPI5 108 aaPredicted RBP6.47□□□□□ -1.37
UBFD1-202ENST00000563366 TRBV30A0A0K0K1B3 111 aa6.47□□□□□ -1.37
UBFD1-202ENST00000563366 A0A1B0GV90 55 aa6.47□□□□□ -1.37
UBFD1-202ENST00000563366 LYRM7Q5U5X0 104 aa6.47□□□□□ -1.37
UBFD1-202ENST00000563366 C2orf48Q96LS8 159 aa6.47□□□□□ -1.37
UBFD1-202ENST00000563366 PRKDCP78527 4128 aaKnown RBP6.46□□□□□ -1.37
UBFD1-202ENST00000563366 MIR7-3HGQ8N6C7 128 aa6.46□□□□□ -1.38
UBFD1-202ENST00000563366 NTN5Q8WTR8 489 aaPredicted RBP6.46□□□□□ -1.38
UBFD1-202ENST00000563366 PRO1854Q9UHT4 67 aa6.46□□□□□ -1.38
UBFD1-202ENST00000563366 A0A0U1RRA0 63 aa6.45□□□□□ -1.38
UBFD1-202ENST00000563366 CFC1BP0CG36 223 aa6.45□□□□□ -1.38
UBFD1-202ENST00000563366 CFC1P0CG37 223 aa6.45□□□□□ -1.38
UBFD1-202ENST00000563366 PFN2P35080 140 aa6.45□□□□□ -1.38
UBFD1-202ENST00000563366 C2orf82Q6UX34 121 aa6.45□□□□□ -1.38
UBFD1-202ENST00000563366 Q8N1X5 172 aa6.45□□□□□ -1.38
UBFD1-202ENST00000563366 DAND5Q8N907 189 aa6.45□□□□□ -1.38
UBFD1-202ENST00000563366 CAMK2N2Q96S95 79 aa6.45□□□□□ -1.38
UBFD1-202ENST00000563366 DYNC2H1Q8NCM8 4307 aaKnown RBP6.44□□□□□ -1.38
UBFD1-202ENST00000563366 H3BUT2 72 aa6.44□□□□□ -1.38
UBFD1-202ENST00000563366 K7ERJ3 54 aa6.44□□□□□ -1.38
UBFD1-202ENST00000563366 FABP2P12104 132 aa6.44□□□□□ -1.38
UBFD1-202ENST00000563366 NPC2P61916 151 aa6.44□□□□□ -1.38
UBFD1-202ENST00000563366 C15orf56Q8N910 161 aa6.44□□□□□ -1.38
UBFD1-202ENST00000563366 LOC107984156A0A0G2JMH3 177 aa6.43□□□□□ -1.38
UBFD1-202ENST00000563366 A0A1W2PPM0 123 aa6.43□□□□□ -1.38
UBFD1-202ENST00000563366 VAMP3Q15836 100 aa6.43□□□□□ -1.38
UBFD1-202ENST00000563366 GTF2H5Q6ZYL4 71 aa6.43□□□□□ -1.38
UBFD1-202ENST00000563366 ARL17AQ8IVW1 177 aa6.43□□□□□ -1.38
UBFD1-202ENST00000563366 TRAV13-2A0A0B4J235 113 aa6.42□□□□□ -1.38
UBFD1-202ENST00000563366 NBDYA0A0U1RRE5 68 aa6.42□□□□□ -1.38
UBFD1-202ENST00000563366 PSCAO43653 123 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms