RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 C2orf82Q6UX34 121 aa5.39□□□□□ -1.55
UBR1-204ENST00000563239 C6orf48Q9UBA6 75 aa5.39□□□□□ -1.55
UBR1-204ENST00000563239 LOC107984640A0A0U1RRK4 108 aa5.38□□□□□ -1.55
UBR1-204ENST00000563239 KRTAP9-6A0A140TA67 174 aa5.38□□□□□ -1.55
UBR1-204ENST00000563239 NDUFA1O15239 70 aa5.38□□□□□ -1.55
UBR1-204ENST00000563239 NUPR1O60356 82 aa5.38□□□□□ -1.55
UBR1-204ENST00000563239 PTTG1IPP53801 180 aa5.38□□□□□ -1.55
UBR1-204ENST00000563239 GEMIN7Q9H840 131 aaKnown RBP5.38□□□□□ -1.55
UBR1-204ENST00000563239 SMIM1B2RUZ4 78 aa5.37□□□□□ -1.55
UBR1-204ENST00000563239 ATP5LO75964 103 aa5.37□□□□□ -1.55
UBR1-204ENST00000563239 INAFM2P0DMQ5 153 aa5.37□□□□□ -1.55
UBR1-204ENST00000563239 IGLC3P0DOY3 106 aa5.37□□□□□ -1.55
UBR1-204ENST00000563239 BAGE3Q86Y29 109 aa5.37□□□□□ -1.55
UBR1-204ENST00000563239 FAM19A2Q8N3H0 131 aa5.37□□□□□ -1.55
UBR1-204ENST00000563239 LINC00469Q8N7U9 141 aa5.37□□□□□ -1.55
UBR1-204ENST00000563239 STPG4Q8N801 248 aa5.37□□□□□ -1.55
UBR1-204ENST00000563239 DPH3Q96FX2 82 aa5.37□□□□□ -1.55
UBR1-204ENST00000563239 A0A1W2PNN7 141 aa5.36□□□□□ -1.55
UBR1-204ENST00000563239 SERF1AO75920 110 aa5.36□□□□□ -1.55
UBR1-204ENST00000563239 PLA2G1BP04054 148 aaKnown RBP5.36□□□□□ -1.55
UBR1-204ENST00000563239 TLX1NBP0CAT3 122 aa5.36□□□□□ -1.55
UBR1-204ENST00000563239 NDUFA6P56556 154 aa5.36□□□□□ -1.55
UBR1-204ENST00000563239 GAGE2BQ13066 116 aa5.36□□□□□ -1.55
UBR1-204ENST00000563239 C9orf116Q5BN46 136 aaPredicted RBP5.36□□□□□ -1.55
UBR1-204ENST00000563239 Q6ZRP5 223 aa5.36□□□□□ -1.55
UBR1-204ENST00000563239 Q8IZM0 81 aa5.36□□□□□ -1.55
UBR1-204ENST00000563239 LINC00474Q9P2X8 69 aa5.36□□□□□ -1.55
UBR1-204ENST00000563239 LRP1Q07954 4544 aaKnown RBP5.36□□□□□ -1.55
UBR1-204ENST00000563239 IGLV5-39A0A0G2JS06 123 aa5.35□□□□□ -1.55
UBR1-204ENST00000563239 TRBV30A0A0K0K1B3 111 aa5.35□□□□□ -1.55
UBR1-204ENST00000563239 C11orf86A6NJI1 115 aa5.35□□□□□ -1.55
UBR1-204ENST00000563239 HSBP1O75506 76 aa5.35□□□□□ -1.55
UBR1-204ENST00000563239 SPINK8P0C7L1 97 aa5.35□□□□□ -1.55
UBR1-204ENST00000563239 ZNF22P17026 224 aaPredicted RBP5.35□□□□□ -1.55
UBR1-204ENST00000563239 HNRNPA3P51991 378 aaKnown RBP5.35□□□□□ -1.55
UBR1-204ENST00000563239 ANKRD39Q53RE8 183 aa5.35□□□□□ -1.55
UBR1-204ENST00000563239 C6orf226Q5I0X4 101 aa5.35□□□□□ -1.55
UBR1-204ENST00000563239 IFI27L1Q96BM0 104 aa5.35□□□□□ -1.55
UBR1-204ENST00000563239 TOMM7Q9P0U1 55 aa5.35□□□□□ -1.55
UBR1-204ENST00000563239 PKIGQ9Y2B9 76 aa5.35□□□□□ -1.55
UBR1-204ENST00000563239 FAT3Q8TDW7 4589 aa5.35□□□□□ -1.55
UBR1-204ENST00000563239 FLG2Q5D862 2391 aaPredicted RBP5.34□□□□□ -1.55
UBR1-204ENST00000563239 TRAV12-1A0A0B4J245 112 aa5.34□□□□□ -1.55
UBR1-204ENST00000563239 PRSS2P07478 247 aa5.34□□□□□ -1.55
UBR1-204ENST00000563239 RPL37AP61513 92 aaKnown RBP5.34□□□□□ -1.55
UBR1-204ENST00000563239 RPL18AQ02543 176 aaKnown RBP5.34□□□□□ -1.55
UBR1-204ENST00000563239 KRTAP7-1Q8IUC3 87 aa5.34□□□□□ -1.55
UBR1-204ENST00000563239 COX7B2Q8TF08 81 aa5.34□□□□□ -1.55
UBR1-204ENST00000563239 PACRGQ96M98 296 aaPredicted RBP5.34□□□□□ -1.55
UBR1-204ENST00000563239 FAM168BA1KXE4 195 aa5.33□□□□□ -1.56
UBR1-204ENST00000563239 NDUFC2-KCTD14E9PQ53 114 aa5.33□□□□□ -1.56
UBR1-204ENST00000563239 HIST1H2BKO60814 126 aa5.33□□□□□ -1.56
UBR1-204ENST00000563239 HIST1H2BJP06899 126 aa5.33□□□□□ -1.56
UBR1-204ENST00000563239 HIST1H2BOP23527 126 aa5.33□□□□□ -1.56
UBR1-204ENST00000563239 HIST1H2BBP33778 126 aa5.33□□□□□ -1.56
UBR1-204ENST00000563239 HIST1H2BDP58876 126 aa5.33□□□□□ -1.56
UBR1-204ENST00000563239 CKS1BP61024 79 aa5.33□□□□□ -1.56
UBR1-204ENST00000563239 HIST1H2BCP62807 126 aa5.33□□□□□ -1.56
UBR1-204ENST00000563239 HIST2H2BEQ16778 126 aa5.33□□□□□ -1.56
UBR1-204ENST00000563239 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.33□□□□□ -1.56
UBR1-204ENST00000563239 HIST1H2BHQ93079 126 aa5.33□□□□□ -1.56
UBR1-204ENST00000563239 HIST1H2BNQ99877 126 aa5.33□□□□□ -1.56
UBR1-204ENST00000563239 HIST1H2BMQ99879 126 aa5.33□□□□□ -1.56
UBR1-204ENST00000563239 CHTOPQ9Y3Y2 248 aaKnown RBP5.33□□□□□ -1.56
UBR1-204ENST00000563239 F8VRH5 84 aa5.32□□□□□ -1.56
UBR1-204ENST00000563239 H3BRM9 83 aa5.32□□□□□ -1.56
UBR1-204ENST00000563239 GAGE2EQ4V326 116 aa5.32□□□□□ -1.56
UBR1-204ENST00000563239 C9orf129Q5T035 196 aaKnown RBP5.32□□□□□ -1.56
UBR1-204ENST00000563239 GAGE2DQ9UEU5 116 aa5.32□□□□□ -1.56
UBR1-204ENST00000563239 LEPROTL1O95214 131 aa5.31□□□□□ -1.56
UBR1-204ENST00000563239 CXCL5P42830 114 aa5.31□□□□□ -1.56
UBR1-204ENST00000563239 ODF1Q14990 250 aa5.31□□□□□ -1.56
UBR1-204ENST00000563239 TMEM223A0PJW6 202 aa5.3□□□□□ -1.56
UBR1-204ENST00000563239 FABP4P15090 132 aa5.3□□□□□ -1.56
UBR1-204ENST00000563239 PRR3P79522 188 aaKnown RBP5.3□□□□□ -1.56
UBR1-204ENST00000563239 TMEM170BQ5T4T1 132 aa5.3□□□□□ -1.56
UBR1-204ENST00000563239 PHF5AQ7RTV0 110 aaKnown RBP5.3□□□□□ -1.56
UBR1-204ENST00000563239 KRTAP11-1Q8IUC1 163 aa5.3□□□□□ -1.56
UBR1-204ENST00000563239 C7orf33Q8WU49 177 aa5.3□□□□□ -1.56
UBR1-204ENST00000563239 ATP6V1G1O75348 118 aa5.29□□□□□ -1.56
UBR1-204ENST00000563239 S100A1P23297 94 aa5.29□□□□□ -1.56
UBR1-204ENST00000563239 C21orf62-AS1Q17RA5 79 aa5.29□□□□□ -1.56
UBR1-204ENST00000563239 KRTAP9-2Q9BYQ4 174 aa5.29□□□□□ -1.56
UBR1-204ENST00000563239 XAGE1AQ9HD64 81 aa5.29□□□□□ -1.56
UBR1-204ENST00000563239 H0Y8G0 127 aa5.28□□□□□ -1.56
UBR1-204ENST00000563239 COA6Q5JTJ3 125 aaKnown RBP5.28□□□□□ -1.56
UBR1-204ENST00000563239 SERTAD4-AS1Q5TG53 156 aa5.28□□□□□ -1.56
UBR1-204ENST00000563239 FAM19A5Q7Z5A7 132 aaPredicted RBP5.28□□□□□ -1.56
UBR1-204ENST00000563239 ZNF625Q96I27 306 aaPredicted RBP5.28□□□□□ -1.56
UBR1-204ENST00000563239 HSPB8Q9UJY1 196 aa5.28□□□□□ -1.56
UBR1-204ENST00000563239 KRTAP29-1A8MX34 341 aaPredicted RBP5.27□□□□□ -1.57
UBR1-204ENST00000563239 PMCHL2Q9BQD1 86 aa5.27□□□□□ -1.57
UBR1-204ENST00000563239 PSORS1C2Q9UIG4 136 aa5.27□□□□□ -1.57
UBR1-204ENST00000563239 H3BS24 57 aa5.26□□□□□ -1.57
UBR1-204ENST00000563239 SRSF9Q13242 221 aaKnown RBP eCLIP5.26□□□□□ -1.57
UBR1-204ENST00000563239 M0QXV9 152 aa5.25□□□□□ -1.57
UBR1-204ENST00000563239 DPM2O94777 84 aa5.25□□□□□ -1.57
UBR1-204ENST00000563239 TSPEAR-AS2P59090 65 aa5.25□□□□□ -1.57
UBR1-204ENST00000563239 MAP1LC3CQ9BXW4 147 aa5.25□□□□□ -1.57
UBR1-204ENST00000563239 ERG28Q9UKR5 140 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms