RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 PRSS2P07478 247 aa10.44□□□□□ -0.74
CDT1-202ENST00000562747 HNRNPA3P51991 378 aaKnown RBP10.44□□□□□ -0.74
CDT1-202ENST00000562747 GAGE2BQ13066 116 aa10.44□□□□□ -0.74
CDT1-202ENST00000562747 PMCHL1Q16048 86 aa10.44□□□□□ -0.74
CDT1-202ENST00000562747 C10orf25Q5T742 122 aa10.44□□□□□ -0.74
CDT1-202ENST00000562747 UNQ6190/PRO20217Q6UXQ8 127 aa10.44□□□□□ -0.74
CDT1-202ENST00000562747 Q8IZM0 81 aa10.44□□□□□ -0.74
CDT1-202ENST00000562747 TRBV30A0A0K0K1B3 111 aa10.43□□□□□ -0.74
CDT1-202ENST00000562747 ATP5LO75964 103 aa10.43□□□□□ -0.74
CDT1-202ENST00000562747 TLX1NBP0CAT3 122 aa10.43□□□□□ -0.74
CDT1-202ENST00000562747 RPL18AQ02543 176 aaKnown RBP10.43□□□□□ -0.74
CDT1-202ENST00000562747 LINC00469Q8N7U9 141 aa10.43□□□□□ -0.74
CDT1-202ENST00000562747 C6orf48Q9UBA6 75 aa10.43□□□□□ -0.74
CDT1-202ENST00000562747 TOMM7Q9P0U1 55 aa10.42□□□□□ -0.74
CDT1-202ENST00000562747 COLCA2A8K830 154 aa10.41□□□□□ -0.74
CDT1-202ENST00000562747 C6orf226Q5I0X4 101 aa10.41□□□□□ -0.74
CDT1-202ENST00000562747 C2orf82Q6UX34 121 aa10.41□□□□□ -0.74
CDT1-202ENST00000562747 C7orf33Q8WU49 177 aa10.41□□□□□ -0.74
CDT1-202ENST00000562747 SMIM1B2RUZ4 78 aa10.4□□□□□ -0.74
CDT1-202ENST00000562747 IGLC3P0DOY3 106 aa10.4□□□□□ -0.74
CDT1-202ENST00000562747 NDUFA6P56556 154 aa10.4□□□□□ -0.74
CDT1-202ENST00000562747 CKS1BP61024 79 aa10.4□□□□□ -0.74
CDT1-202ENST00000562747 BAGE3Q86Y29 109 aa10.4□□□□□ -0.74
CDT1-202ENST00000562747 CXCL5P42830 114 aa10.39□□□□□ -0.75
CDT1-202ENST00000562747 H3BRM9 83 aa10.38□□□□□ -0.75
CDT1-202ENST00000562747 Q6ZRP5 223 aa10.38□□□□□ -0.75
CDT1-202ENST00000562747 HSBP1O75506 76 aa10.37□□□□□ -0.75
CDT1-202ENST00000562747 A0A1W2PNN7 141 aa10.36□□□□□ -0.75
CDT1-202ENST00000562747 NDUFC2-KCTD14E9PQ53 114 aa10.36□□□□□ -0.75
CDT1-202ENST00000562747 F8VRH5 84 aa10.36□□□□□ -0.75
CDT1-202ENST00000562747 SPINK8P0C7L1 97 aa10.36□□□□□ -0.75
CDT1-202ENST00000562747 C9orf116Q5BN46 136 aaPredicted RBP10.36□□□□□ -0.75
CDT1-202ENST00000562747 COX7B2Q8TF08 81 aa10.36□□□□□ -0.75
CDT1-202ENST00000562747 MT1HL1P0DM35 61 aa10.35□□□□□ -0.75
CDT1-202ENST00000562747 IFI27L1Q96BM0 104 aa10.35□□□□□ -0.75
CDT1-202ENST00000562747 ZNF22P17026 224 aaPredicted RBP10.34□□□□□ -0.75
CDT1-202ENST00000562747 GAGE2EQ4V326 116 aa10.34□□□□□ -0.75
CDT1-202ENST00000562747 GAGE2DQ9UEU5 116 aa10.34□□□□□ -0.75
CDT1-202ENST00000562747 TRAV12-1A0A0B4J245 112 aa10.33□□□□□ -0.76
CDT1-202ENST00000562747 SCO1O75880 301 aa10.33□□□□□ -0.76
CDT1-202ENST00000562747 FAM19A2Q8N3H0 131 aa10.33□□□□□ -0.76
CDT1-202ENST00000562747 CHTOPQ9Y3Y2 248 aaKnown RBP10.33□□□□□ -0.76
CDT1-202ENST00000562747 IGLV5-39A0A0G2JS06 123 aa10.32□□□□□ -0.76
CDT1-202ENST00000562747 SERF1AO75920 110 aa10.32□□□□□ -0.76
CDT1-202ENST00000562747 LINC00310P59036 64 aa10.32□□□□□ -0.76
CDT1-202ENST00000562747 C11orf86A6NJI1 115 aa10.31□□□□□ -0.76
CDT1-202ENST00000562747 PRR3P79522 188 aaKnown RBP10.31□□□□□ -0.76
CDT1-202ENST00000562747 LEPROTL1O95214 131 aa10.29□□□□□ -0.76
CDT1-202ENST00000562747 TMEM170BQ5T4T1 132 aa10.29□□□□□ -0.76
CDT1-202ENST00000562747 FAM168BA1KXE4 195 aa10.28□□□□□ -0.76
CDT1-202ENST00000562747 C9orf129Q5T035 196 aaKnown RBP10.28□□□□□ -0.76
CDT1-202ENST00000562747 TNXBP22105 4242 aa10.27□□□□□ -0.76
CDT1-202ENST00000562747 NUPR1O60356 82 aa10.27□□□□□ -0.77
CDT1-202ENST00000562747 PHF5AQ7RTV0 110 aaKnown RBP10.27□□□□□ -0.77
CDT1-202ENST00000562747 FAM19A5Q7Z5A7 132 aaPredicted RBP10.27□□□□□ -0.77
CDT1-202ENST00000562747 HSPB8Q9UJY1 196 aa10.27□□□□□ -0.77
CDT1-202ENST00000562747 LRP2P98164 4655 aa10.25□□□□□ -0.77
CDT1-202ENST00000562747 SFTA2Q6UW10 78 aa10.25□□□□□ -0.77
CDT1-202ENST00000562747 KRTAP7-1Q8IUC3 87 aa10.25□□□□□ -0.77
CDT1-202ENST00000562747 TMEM223A0PJW6 202 aa10.24□□□□□ -0.77
CDT1-202ENST00000562747 M0QXV9 152 aa10.24□□□□□ -0.77
CDT1-202ENST00000562747 HIST1H2BKO60814 126 aa10.24□□□□□ -0.77
CDT1-202ENST00000562747 HIST1H2BJP06899 126 aa10.24□□□□□ -0.77
CDT1-202ENST00000562747 HIST1H2BOP23527 126 aa10.24□□□□□ -0.77
CDT1-202ENST00000562747 HIST1H2BBP33778 126 aa10.24□□□□□ -0.77
CDT1-202ENST00000562747 HIST1H2BDP58876 126 aa10.24□□□□□ -0.77
CDT1-202ENST00000562747 HIST1H2BCP62807 126 aa10.24□□□□□ -0.77
CDT1-202ENST00000562747 ODF1Q14990 250 aa10.24□□□□□ -0.77
CDT1-202ENST00000562747 HIST2H2BEQ16778 126 aa10.24□□□□□ -0.77
CDT1-202ENST00000562747 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.24□□□□□ -0.77
CDT1-202ENST00000562747 HIST1H2BHQ93079 126 aa10.24□□□□□ -0.77
CDT1-202ENST00000562747 HIST1H2BNQ99877 126 aa10.24□□□□□ -0.77
CDT1-202ENST00000562747 HIST1H2BMQ99879 126 aa10.24□□□□□ -0.77
CDT1-202ENST00000562747 XAGE1AQ9HD64 81 aa10.24□□□□□ -0.77
CDT1-202ENST00000562747 RNF213Q63HN8 5207 aa10.24□□□□□ -0.77
CDT1-202ENST00000562747 H0Y8G0 127 aa10.22□□□□□ -0.77
CDT1-202ENST00000562747 FABP4P15090 132 aa10.22□□□□□ -0.77
CDT1-202ENST00000562747 PSORS1C2Q9UIG4 136 aa10.22□□□□□ -0.77
CDT1-202ENST00000562747 COX17Q14061 63 aa10.2□□□□□ -0.78
CDT1-202ENST00000562747 SPINK6Q6UWN8 80 aa10.2□□□□□ -0.78
CDT1-202ENST00000562747 S100A1P23297 94 aa10.19□□□□□ -0.78
CDT1-202ENST00000562747 PLNP26678 52 aa10.19□□□□□ -0.78
CDT1-202ENST00000562747 SRSF9Q13242 221 aaKnown RBP eCLIP10.19□□□□□ -0.78
CDT1-202ENST00000562747 C1orf137Q5JT78 98 aa10.19□□□□□ -0.78
CDT1-202ENST00000562747 ZNF625Q96I27 306 aaPredicted RBP10.19□□□□□ -0.78
CDT1-202ENST00000562747 MAP1LC3CQ9BXW4 147 aa10.19□□□□□ -0.78
CDT1-202ENST00000562747 ERG28Q9UKR5 140 aa10.19□□□□□ -0.78
CDT1-202ENST00000562747 C22orf24Q9Y442 160 aa10.19□□□□□ -0.78
CDT1-202ENST00000562747 PFN2P35080 140 aa10.18□□□□□ -0.78
CDT1-202ENST00000562747 UBE2BP63146 152 aa10.18□□□□□ -0.78
CDT1-202ENST00000562747 TP73-AS1Q9UF72 201 aa10.18□□□□□ -0.78
CDT1-202ENST00000562747 LBHQ53QV2 105 aaPredicted RBP10.17□□□□□ -0.78
CDT1-202ENST00000562747 KRTAP11-1Q8IUC1 163 aa10.17□□□□□ -0.78
CDT1-202ENST00000562747 DPM2O94777 84 aa10.16□□□□□ -0.78
CDT1-202ENST00000562747 COA6Q5JTJ3 125 aaKnown RBP10.15□□□□□ -0.78
CDT1-202ENST00000562747 IGLV5-37A0A075B6J1 123 aa10.14□□□□□ -0.79
CDT1-202ENST00000562747 IGKCP01834 107 aa10.14□□□□□ -0.79
CDT1-202ENST00000562747 IGLV7-43P04211 117 aa10.14□□□□□ -0.79
CDT1-202ENST00000562747 MRPL55Q7Z7F7 128 aaKnown RBP10.14□□□□□ -0.79
CDT1-202ENST00000562747 HERV-K104P63124 156 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms