RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 MEIG1Q5JSS6 88 aa9.53□□□□□ -0.88
COMMD4-205ENST00000562310 SPANXDQ9BXN6 97 aa9.53□□□□□ -0.88
COMMD4-205ENST00000562310 SPANXCQ9NY87 97 aa9.53□□□□□ -0.88
COMMD4-205ENST00000562310 F8WDY8 70 aa9.52□□□□□ -0.89
COMMD4-205ENST00000562310 C3orf84H3BNL1 204 aa9.52□□□□□ -0.89
COMMD4-205ENST00000562310 COPS9Q8WXC6 57 aa9.52□□□□□ -0.89
COMMD4-205ENST00000562310 LITAFQ99732 161 aa9.52□□□□□ -0.89
COMMD4-205ENST00000562310 NBDYA0A0U1RRE5 68 aa9.51□□□□□ -0.89
COMMD4-205ENST00000562310 TMEM238LA0A1B0GVL6 79 aa9.51□□□□□ -0.89
COMMD4-205ENST00000562310 A6NDN8 102 aa9.51□□□□□ -0.89
COMMD4-205ENST00000562310 A6NJY4 79 aa9.51□□□□□ -0.89
COMMD4-205ENST00000562310 GVQW2A0A096LPI5 108 aaPredicted RBP9.5□□□□□ -0.89
COMMD4-205ENST00000562310 IFITM1P13164 125 aa9.5□□□□□ -0.89
COMMD4-205ENST00000562310 COL5A1-AS1Q5SY13 56 aa9.5□□□□□ -0.89
COMMD4-205ENST00000562310 C15orf56Q8N910 161 aa9.5□□□□□ -0.89
COMMD4-205ENST00000562310 KRTAP1-5Q9BYS1 174 aa9.5□□□□□ -0.89
COMMD4-205ENST00000562310 DNAH7Q8WXX0 4024 aa9.5□□□□□ -0.89
COMMD4-205ENST00000562310 ZNF561-AS1K7EIQ3 104 aa9.49□□□□□ -0.89
COMMD4-205ENST00000562310 PTTG1IPP53801 180 aa9.49□□□□□ -0.89
COMMD4-205ENST00000562310 NTN5Q8WTR8 489 aaPredicted RBP9.49□□□□□ -0.89
COMMD4-205ENST00000562310 C2orf48Q96LS8 159 aa9.49□□□□□ -0.89
COMMD4-205ENST00000562310 PPDPFQ9H3Y8 114 aa9.49□□□□□ -0.89
COMMD4-205ENST00000562310 FXYD2P54710 66 aa9.48□□□□□ -0.89
COMMD4-205ENST00000562310 RPL24P83731 157 aaKnown RBP9.48□□□□□ -0.89
COMMD4-205ENST00000562310 ERG28Q9UKR5 140 aa9.48□□□□□ -0.89
COMMD4-205ENST00000562310 SMIM13P0DJ93 91 aa9.47□□□□□ -0.89
COMMD4-205ENST00000562310 COX17Q14061 63 aa9.47□□□□□ -0.89
COMMD4-205ENST00000562310 CASC10Q5T4H9 136 aa9.47□□□□□ -0.89
COMMD4-205ENST00000562310 ADAMTSL4-AS1Q5T5F5 129 aa9.47□□□□□ -0.89
COMMD4-205ENST00000562310 C2orf82Q6UX34 121 aa9.47□□□□□ -0.89
COMMD4-205ENST00000562310 TRBV30A0A0K0K1B3 111 aa9.45□□□□□ -0.9
COMMD4-205ENST00000562310 USP17L23D6RBM5 183 aa9.45□□□□□ -0.9
COMMD4-205ENST00000562310 LINC00158P58513 81 aa9.45□□□□□ -0.9
COMMD4-205ENST00000562310 HIGD2BQ4VC39 106 aa9.45□□□□□ -0.9
COMMD4-205ENST00000562310 CAMK2N2Q96S95 79 aa9.45□□□□□ -0.9
COMMD4-205ENST00000562310 CSMD3Q7Z407 3707 aa9.44□□□□□ -0.9
COMMD4-205ENST00000562310 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.44□□□□□ -0.9
COMMD4-205ENST00000562310 PSCAO43653 123 aa9.44□□□□□ -0.9
COMMD4-205ENST00000562310 MUSTN1Q8IVN3 82 aa9.44□□□□□ -0.9
COMMD4-205ENST00000562310 C6orf223Q8N319 242 aa9.44□□□□□ -0.9
COMMD4-205ENST00000562310 LINC00308Q8TCZ7 52 aa9.44□□□□□ -0.9
COMMD4-205ENST00000562310 A0A0U1RRA0 63 aa9.43□□□□□ -0.9
COMMD4-205ENST00000562310 A0A1B0GWB2 263 aa9.43□□□□□ -0.9
COMMD4-205ENST00000562310 PFN2P35080 140 aa9.43□□□□□ -0.9
COMMD4-205ENST00000562310 UNQ6190/PRO20217Q6UXQ8 127 aa9.43□□□□□ -0.9
COMMD4-205ENST00000562310 MIR7-3HGQ8N6C7 128 aa9.43□□□□□ -0.9
COMMD4-205ENST00000562310 NHP2Q9NX24 153 aaKnown RBP9.43□□□□□ -0.9
COMMD4-205ENST00000562310 C14orf177Q52M58 125 aa9.42□□□□□ -0.9
COMMD4-205ENST00000562310 DAND5Q8N907 189 aa9.42□□□□□ -0.9
COMMD4-205ENST00000562310 LINC00476Q8WZB0 136 aa9.42□□□□□ -0.9
COMMD4-205ENST00000562310 LINC00526Q96FQ7 95 aa9.42□□□□□ -0.9
COMMD4-205ENST00000562310 A4D1N5 150 aa9.41□□□□□ -0.9
COMMD4-205ENST00000562310 SYCNQ0VAF6 134 aa9.41□□□□□ -0.9
COMMD4-205ENST00000562310 C10orf25Q5T742 122 aa9.41□□□□□ -0.9
COMMD4-205ENST00000562310 C6orf48Q9UBA6 75 aa9.41□□□□□ -0.9
COMMD4-205ENST00000562310 STARD9Q9P2P6 4700 aa9.41□□□□□ -0.9
COMMD4-205ENST00000562310 TENM2Q9NT68 2774 aa9.41□□□□□ -0.9
COMMD4-205ENST00000562310 A0A0B4J2C4 111 aa9.4□□□□□ -0.9
COMMD4-205ENST00000562310 RNF151Q2KHN1 245 aa9.4□□□□□ -0.9
COMMD4-205ENST00000562310 Q6ZR54 194 aa9.4□□□□□ -0.9
COMMD4-205ENST00000562310 LY6G6CO95867 125 aa9.39□□□□□ -0.91
COMMD4-205ENST00000562310 NPC2P61916 151 aa9.39□□□□□ -0.91
COMMD4-205ENST00000562310 Q6ZRU5 148 aa9.39□□□□□ -0.91
COMMD4-205ENST00000562310 CARD19Q96LW7 228 aa9.39□□□□□ -0.91
COMMD4-205ENST00000562310 LOC107984156A0A0G2JMH3 177 aa9.38□□□□□ -0.91
COMMD4-205ENST00000562310 SOSTDC1Q6X4U4 206 aa9.38□□□□□ -0.91
COMMD4-205ENST00000562310 Q6ZRN7 208 aaPredicted RBP9.38□□□□□ -0.91
COMMD4-205ENST00000562310 ARL17AQ8IVW1 177 aa9.38□□□□□ -0.91
COMMD4-205ENST00000562310 K7ERJ3 54 aa9.37□□□□□ -0.91
COMMD4-205ENST00000562310 TAX1BP3O14907 124 aa9.37□□□□□ -0.91
COMMD4-205ENST00000562310 C9orf116Q5BN46 136 aaPredicted RBP9.37□□□□□ -0.91
COMMD4-205ENST00000562310 RAB37Q96AX2 223 aa9.37□□□□□ -0.91
COMMD4-205ENST00000562310 PLECQ15149 4684 aaKnown RBP9.37□□□□□ -0.91
COMMD4-205ENST00000562310 M0R2N4 97 aa9.36□□□□□ -0.91
COMMD4-205ENST00000562310 CFC1BP0CG36 223 aa9.36□□□□□ -0.91
COMMD4-205ENST00000562310 CFC1P0CG37 223 aa9.36□□□□□ -0.91
COMMD4-205ENST00000562310 SND1-IT1Q9HBX3 110 aa9.36□□□□□ -0.91
COMMD4-205ENST00000562310 NDUFC2-KCTD14E9PQ53 114 aa9.35□□□□□ -0.91
COMMD4-205ENST00000562310 LECT2O14960 151 aa9.35□□□□□ -0.91
COMMD4-205ENST00000562310 EIF4EBP3O60516 100 aaPredicted RBP9.35□□□□□ -0.91
COMMD4-205ENST00000562310 KRTAP17-1Q9BYP8 105 aa9.35□□□□□ -0.91
COMMD4-205ENST00000562310 PRO1854Q9UHT4 67 aa9.35□□□□□ -0.91
COMMD4-205ENST00000562310 BIRC6Q9NR09 4857 aa9.35□□□□□ -0.91
COMMD4-205ENST00000562310 C9orf118A6NHY6 69 aa9.34□□□□□ -0.91
COMMD4-205ENST00000562310 CNBPP62633 177 aaKnown RBP9.34□□□□□ -0.91
COMMD4-205ENST00000562310 NDUFC2O95298 119 aa9.33□□□□□ -0.92
COMMD4-205ENST00000562310 TLX1NBP0CAT3 122 aa9.33□□□□□ -0.92
COMMD4-205ENST00000562310 WFDC2Q14508 124 aa9.33□□□□□ -0.92
COMMD4-205ENST00000562310 LRCOL1A6NCL2 159 aa9.32□□□□□ -0.92
COMMD4-205ENST00000562310 C1orf134Q5TEV5 83 aa9.32□□□□□ -0.92
COMMD4-205ENST00000562310 PGPEP1Q9NXJ5 209 aa9.32□□□□□ -0.92
COMMD4-205ENST00000562310 PKIGQ9Y2B9 76 aa9.32□□□□□ -0.92
COMMD4-205ENST00000562310 VPS13DQ5THJ4 4388 aa9.32□□□□□ -0.92
COMMD4-205ENST00000562310 TRAV13-2A0A0B4J235 113 aa9.31□□□□□ -0.92
COMMD4-205ENST00000562310 DNAH1Q9P2D7 4330 aa9.3□□□□□ -0.92
COMMD4-205ENST00000562310 SLPIP03973 132 aa9.3□□□□□ -0.92
COMMD4-205ENST00000562310 LOC107984640A0A0U1RRK4 108 aa9.29□□□□□ -0.92
COMMD4-205ENST00000562310 A0A1B0GV90 55 aa9.29□□□□□ -0.92
COMMD4-205ENST00000562310 H3BUT2 72 aa9.29□□□□□ -0.92
COMMD4-205ENST00000562310 TSPAN13O95857 204 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms