RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 H7BZZ5 65 aa1.02□□□□□ -2.25
RTF1-207ENST00000561076 KALRNO60229 2985 aa1.02□□□□□ -2.25
RTF1-207ENST00000561076 PLXNA2O75051 1894 aa1.02□□□□□ -2.25
RTF1-207ENST00000561076 HMGN2P05204 90 aaKnown RBP1.02□□□□□ -2.25
RTF1-207ENST00000561076 PTPRFP10586 1907 aa1.02□□□□□ -2.25
RTF1-207ENST00000561076 S100A3P33764 101 aa1.02□□□□□ -2.25
RTF1-207ENST00000561076 CCL18P55774 89 aa1.02□□□□□ -2.25
RTF1-207ENST00000561076 KRTAP10-12P60413 245 aa1.02□□□□□ -2.25
RTF1-207ENST00000561076 NUMA1Q14980 2115 aa1.02□□□□□ -2.25
RTF1-207ENST00000561076 TDRG1Q3Y452 100 aa1.02□□□□□ -2.25
RTF1-207ENST00000561076 C2CD3Q4AC94 2353 aa1.02□□□□□ -2.25
RTF1-207ENST00000561076 FREM1Q5H8C1 2179 aa1.02□□□□□ -2.25
RTF1-207ENST00000561076 Q5VV11 94 aa1.02□□□□□ -2.25
RTF1-207ENST00000561076 Q6ZRN7 208 aaPredicted RBP1.02□□□□□ -2.25
RTF1-207ENST00000561076 MUSTN1Q8IVN3 82 aa1.02□□□□□ -2.25
RTF1-207ENST00000561076 FAM223AQ8IWN6 122 aa1.02□□□□□ -2.25
RTF1-207ENST00000561076 UNC13CQ8NB66 2214 aa1.02□□□□□ -2.25
RTF1-207ENST00000561076 FDCSPQ8NFU4 85 aa1.02□□□□□ -2.25
RTF1-207ENST00000561076 KRTAP9-8Q9BYQ0 159 aa1.02□□□□□ -2.25
RTF1-207ENST00000561076 CYSTM1Q9H1C7 97 aa1.02□□□□□ -2.25
RTF1-207ENST00000561076 PLXNA1Q9UIW2 1896 aa1.02□□□□□ -2.25
RTF1-207ENST00000561076 CFAP54Q96N23 3096 aa1.02□□□□□ -2.25
RTF1-207ENST00000561076 MYO18BQ8IUG5 2567 aa1.02□□□□□ -2.25
RTF1-207ENST00000561076 NCOR2Q9Y618 2525 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 TECTAO75443 2155 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 EML5Q05BV3 1969 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 LTBP2Q14767 1821 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 ZFHX4Q86UP3 3567 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 ANKRD36CQ5JPF3 1778 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 LRRC37AA6NMS7 1700 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 C5orf42Q9H799 3197 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 SPTBN4Q9H254 2564 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 NBDYA0A0U1RRE5 68 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 A0A1B0GVY2 172 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 F8WEM9 126 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 M0R3E3 92 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 PRB1P04280 392 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 SMIM13P0DJ93 91 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 EFNA4P52798 201 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 FXYD6P3P58550 94 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 GNGT1P63211 74 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 WFDC2Q14508 124 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 PLGLAQ15195 96 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 SPINK13Q1W4C9 94 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 LCE3CQ5T5A8 94 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 S100ZQ8WXG8 99 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 PRR15LQ9BU68 103 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 HIGD1BQ9P298 99 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 CACNA1HO95180 2353 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 SNRNP200O75643 2136 aaKnown RBP1.01□□□□□ -2.25
RTF1-207ENST00000561076 CHD3Q12873 2000 aaKnown RBP1.01□□□□□ -2.25
RTF1-207ENST00000561076 CEP192Q8TEP8 1941 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 KIF20BQ96Q89 1820 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 LAMB1P07942 1786 aa1.01□□□□□ -2.25
RTF1-207ENST00000561076 EP300Q09472 2414 aaPredicted RBP1□□□□□ -2.25
RTF1-207ENST00000561076 DOCK10Q96BY6 2186 aa1□□□□□ -2.25
RTF1-207ENST00000561076 ZGRF1Q86YA3 2104 aa1□□□□□ -2.25
RTF1-207ENST00000561076 USP34Q70CQ2 3546 aa1□□□□□ -2.25
RTF1-207ENST00000561076 CDH23Q9H251 3354 aa1□□□□□ -2.25
RTF1-207ENST00000561076 A0A087WXM4 84 aa1□□□□□ -2.25
RTF1-207ENST00000561076 TRGV1A0A0A0MS02 117 aa1□□□□□ -2.25
RTF1-207ENST00000561076 MYMXA0A1B0GTQ4 84 aa1□□□□□ -2.25
RTF1-207ENST00000561076 CLPSL1A2RUU4 121 aa1□□□□□ -2.25
RTF1-207ENST00000561076 CEBPZOSA8MTT3 80 aa1□□□□□ -2.25
RTF1-207ENST00000561076 UMAD1C9J7I0 102 aa1□□□□□ -2.25
RTF1-207ENST00000561076 PRB2P02812 416 aaPredicted RBP1□□□□□ -2.25
RTF1-207ENST00000561076 ARMS2P0C7Q2 107 aa1□□□□□ -2.25
RTF1-207ENST00000561076 IGLC2P0DOY2 106 aa1□□□□□ -2.25
RTF1-207ENST00000561076 IGLC3P0DOY3 106 aa1□□□□□ -2.25
RTF1-207ENST00000561076 GCHFRP30047 84 aa1□□□□□ -2.25
RTF1-207ENST00000561076 KRTAP10-9P60411 292 aa1□□□□□ -2.25
RTF1-207ENST00000561076 BVES-AS1Q5T3Y7 98 aa1□□□□□ -2.25
RTF1-207ENST00000561076 CFAP126Q5VTH2 177 aa1□□□□□ -2.25
RTF1-207ENST00000561076 LINC00575Q6W349 94 aa1□□□□□ -2.25
RTF1-207ENST00000561076 C6orf201Q7Z4U5 140 aa1□□□□□ -2.25
RTF1-207ENST00000561076 DEFB119Q8N690 84 aa1□□□□□ -2.25
RTF1-207ENST00000561076 DEFB124Q8NES8 71 aa1□□□□□ -2.25
RTF1-207ENST00000561076 WFDC6Q9BQY6 131 aa1□□□□□ -2.25
RTF1-207ENST00000561076 BPESC1Q9GZL8 116 aa1□□□□□ -2.25
RTF1-207ENST00000561076 LINC01558Q9Y6Z2 57 aa1□□□□□ -2.25
RTF1-207ENST00000561076 SIP14410 1827 aa1□□□□□ -2.25
RTF1-207ENST00000561076 GVINP1Q7Z2Y8 2422 aa1□□□□□ -2.25
RTF1-207ENST00000561076 XIRP2A4UGR9 3374 aa1□□□□□ -2.25
RTF1-207ENST00000561076 PIEZO2Q9H5I5 2752 aa1□□□□□ -2.25
RTF1-207ENST00000561076 CFAP47Q6ZTR5 3102 aa1□□□□□ -2.25
RTF1-207ENST00000561076 MDC1Q14676 2089 aaKnown RBP1□□□□□ -2.25
RTF1-207ENST00000561076 PCDH15Q96QU1 1955 aa0.99□□□□□ -2.25
RTF1-207ENST00000561076 MYH8P13535 1937 aa0.99□□□□□ -2.25
RTF1-207ENST00000561076 FN1P02751 2386 aaKnown RBP0.99□□□□□ -2.25
RTF1-207ENST00000561076 PSME4Q14997 1843 aa0.99□□□□□ -2.25
RTF1-207ENST00000561076 WDFY4Q6ZS81 3184 aa0.99□□□□□ -2.25
RTF1-207ENST00000561076 MUC22E2RYF6 1773 aaPredicted RBP0.99□□□□□ -2.25
RTF1-207ENST00000561076 ARFGEF3Q5TH69 2177 aa0.99□□□□□ -2.25
RTF1-207ENST00000561076 KRTAP4-8A0A0G2JLE6 195 aa0.99□□□□□ -2.25
RTF1-207ENST00000561076 CFDP00746 253 aaPredicted RBP0.99□□□□□ -2.25
RTF1-207ENST00000561076 PI4KAP42356 2102 aa0.99□□□□□ -2.25
RTF1-207ENST00000561076 SPINT3P49223 89 aa0.99□□□□□ -2.25
RTF1-207ENST00000561076 KRTAP21-3Q3LHN1 58 aa0.99□□□□□ -2.25
RTF1-207ENST00000561076 SMIM11BQ8TCY0 68 aa0.99□□□□□ -2.25
RTF1-207ENST00000561076 MYO9AB2RTY4 2548 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms