RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 A0A096LNT2 108 aa11.48□□□□□ -0.57
TPM1-228ENST00000560975 TMEM86BQ8N661 226 aa11.48□□□□□ -0.57
TPM1-228ENST00000560975 NANOS2P60321 138 aaKnown RBP11.47□□□□□ -0.57
TPM1-228ENST00000560975 UBL5Q9BZL1 73 aa11.47□□□□□ -0.57
TPM1-228ENST00000560975 TRBV6-8A0A0A6YYG3 113 aa11.47□□□□□ -0.57
TPM1-228ENST00000560975 A0A1W2PRX2 142 aa11.47□□□□□ -0.57
TPM1-228ENST00000560975 NDUFC2O95298 119 aa11.47□□□□□ -0.57
TPM1-228ENST00000560975 EPG5Q9HCE0 2579 aa11.47□□□□□ -0.57
TPM1-228ENST00000560975 ANKRD17O75179 2603 aaKnown RBP11.47□□□□□ -0.57
TPM1-228ENST00000560975 PTPN13Q12923 2485 aa11.46□□□□□ -0.57
TPM1-228ENST00000560975 Q6YL49 198 aa11.46□□□□□ -0.57
TPM1-228ENST00000560975 TMEM256-PLSCR3K7ERE1 68 aa11.46□□□□□ -0.57
TPM1-228ENST00000560975 LINC00959A0A1B0GUT2 108 aa11.46□□□□□ -0.58
TPM1-228ENST00000560975 ATP5EP2Q5VTU8 51 aa11.46□□□□□ -0.58
TPM1-228ENST00000560975 C4orf3Q8WVX3 66 aa11.46□□□□□ -0.58
TPM1-228ENST00000560975 FAM236DA0A1B0GTK5 79 aa11.45□□□□□ -0.58
TPM1-228ENST00000560975 FAM236CP0DP71 79 aa11.45□□□□□ -0.58
TPM1-228ENST00000560975 WFDC10AQ9H1F0 79 aa11.45□□□□□ -0.58
TPM1-228ENST00000560975 RPL35AP18077 110 aaKnown RBP11.44□□□□□ -0.58
TPM1-228ENST00000560975 LINC00167Q96N53 147 aa11.44□□□□□ -0.58
TPM1-228ENST00000560975 FN1P02751 2386 aaKnown RBP11.43□□□□□ -0.58
TPM1-228ENST00000560975 SETXQ7Z333 2677 aaKnown RBP11.43□□□□□ -0.58
TPM1-228ENST00000560975 TEX15Q9BXT5 2789 aa11.42□□□□□ -0.58
TPM1-228ENST00000560975 PLAC8L1A1L4L8 177 aa11.42□□□□□ -0.58
TPM1-228ENST00000560975 M0R2N4 97 aa11.42□□□□□ -0.58
TPM1-228ENST00000560975 C6orf99Q4VX62 202 aa11.42□□□□□ -0.58
TPM1-228ENST00000560975 NDUFC2-KCTD14E9PQ53 114 aa11.42□□□□□ -0.58
TPM1-228ENST00000560975 SNURFQ9Y675 71 aa11.42□□□□□ -0.58
TPM1-228ENST00000560975 HAMPP81172 84 aa11.41□□□□□ -0.58
TPM1-228ENST00000560975 LYPD5Q6UWN5 251 aa11.41□□□□□ -0.58
TPM1-228ENST00000560975 SONP18583 2426 aaKnown RBP11.41□□□□□ -0.58
TPM1-228ENST00000560975 C9orf116Q5BN46 136 aaPredicted RBP11.4□□□□□ -0.58
TPM1-228ENST00000560975 GIG44P09565 113 aaPredicted RBP11.4□□□□□ -0.58
TPM1-228ENST00000560975 LRRK2Q5S007 2527 aa11.4□□□□□ -0.59
TPM1-228ENST00000560975 LAMTOR3Q9UHA4 124 aa11.39□□□□□ -0.59
TPM1-228ENST00000560975 NF1P21359 2839 aa11.39□□□□□ -0.59
TPM1-228ENST00000560975 NAV2Q8IVL1 2488 aa11.39□□□□□ -0.59
TPM1-228ENST00000560975 H7BZZ5 65 aa11.39□□□□□ -0.59
TPM1-228ENST00000560975 TRAV10A0A0B4J240 114 aa11.38□□□□□ -0.59
TPM1-228ENST00000560975 C16orf74Q96GX8 76 aa11.38□□□□□ -0.59
TPM1-228ENST00000560975 A0A096LPF7 62 aa11.38□□□□□ -0.59
TPM1-228ENST00000560975 CFAP46Q8IYW2 2715 aa11.38□□□□□ -0.59
TPM1-228ENST00000560975 RBM3P98179 157 aaKnown RBP11.38□□□□□ -0.59
TPM1-228ENST00000560975 DOPEY1Q5JWR5 2465 aa11.37□□□□□ -0.59
TPM1-228ENST00000560975 DEFB130BP0DP73 79 aa11.37□□□□□ -0.59
TPM1-228ENST00000560975 DEFB130AP0DP74 79 aa11.37□□□□□ -0.59
TPM1-228ENST00000560975 RMI2Q96E14 147 aa11.37□□□□□ -0.59
TPM1-228ENST00000560975 TRBV10-3A0A0K0K1G6 114 aa11.37□□□□□ -0.59
TPM1-228ENST00000560975 J3QLI3 93 aa11.37□□□□□ -0.59
TPM1-228ENST00000560975 Q8IZM0 81 aa11.37□□□□□ -0.59
TPM1-228ENST00000560975 Q8NDZ9 215 aa11.37□□□□□ -0.59
TPM1-228ENST00000560975 ACACBO00763 2458 aa11.36□□□□□ -0.59
TPM1-228ENST00000560975 CR1P17927 2039 aa11.36□□□□□ -0.59
TPM1-228ENST00000560975 Q6ZQT0 140 aa11.36□□□□□ -0.59
TPM1-228ENST00000560975 TRAV7A0A075B6U4 112 aa11.35□□□□□ -0.59
TPM1-228ENST00000560975 LINC01547P58512 204 aaPredicted RBP11.35□□□□□ -0.59
TPM1-228ENST00000560975 FAM208BQ5VWN6 2430 aa11.35□□□□□ -0.59
TPM1-228ENST00000560975 MYO18BQ8IUG5 2567 aa11.35□□□□□ -0.59
TPM1-228ENST00000560975 IGLV10-54A0A075B6I4 117 aa11.34□□□□□ -0.59
TPM1-228ENST00000560975 SPATA3Q8NHX4 192 aa11.34□□□□□ -0.59
TPM1-228ENST00000560975 SERP1Q9Y6X1 66 aa11.34□□□□□ -0.59
TPM1-228ENST00000560975 ZFYVE26Q68DK2 2539 aa11.34□□□□□ -0.59
TPM1-228ENST00000560975 DSCR9P59020 149 aa11.34□□□□□ -0.59
TPM1-228ENST00000560975 LINC00269Q8N2A0 174 aa11.34□□□□□ -0.59
TPM1-228ENST00000560975 LINC00336Q6ZUF6 198 aa11.33□□□□□ -0.6
TPM1-228ENST00000560975 SCXQ7RTU7 201 aa11.33□□□□□ -0.6
TPM1-228ENST00000560975 LINC00575Q6W349 94 aa11.33□□□□□ -0.6
TPM1-228ENST00000560975 Q6ZVQ6 151 aa11.33□□□□□ -0.6
TPM1-228ENST00000560975 NBEAL2Q6ZNJ1 2754 aa11.33□□□□□ -0.6
TPM1-228ENST00000560975 GYPEP15421 78 aa11.32□□□□□ -0.6
TPM1-228ENST00000560975 ZNF843Q8N446 348 aa11.32□□□□□ -0.6
TPM1-228ENST00000560975 F8WEM9 126 aa11.32□□□□□ -0.6
TPM1-228ENST00000560975 CCL24O00175 119 aa11.31□□□□□ -0.6
TPM1-228ENST00000560975 ABCA12Q86UK0 2595 aa11.31□□□□□ -0.6
TPM1-228ENST00000560975 FSHBP01225 129 aa11.31□□□□□ -0.6
TPM1-228ENST00000560975 ZNF561-AS1K7EIQ3 104 aa11.3□□□□□ -0.6
TPM1-228ENST00000560975 LINC00482Q8N8I6 264 aa11.3□□□□□ -0.6
TPM1-228ENST00000560975 IGHV4-31P0DP07 118 aa11.3□□□□□ -0.6
TPM1-228ENST00000560975 KIAA0087Q14695 138 aa11.29□□□□□ -0.6
TPM1-228ENST00000560975 Q8N3U1 123 aa11.29□□□□□ -0.6
TPM1-228ENST00000560975 PKD1L2Q7Z442 2459 aa11.28□□□□□ -0.6
TPM1-228ENST00000560975 Q6ZQY7 126 aa11.28□□□□□ -0.6
TPM1-228ENST00000560975 APCP25054 2843 aa11.28□□□□□ -0.6
TPM1-228ENST00000560975 CACNA1AO00555 2505 aa11.28□□□□□ -0.6
TPM1-228ENST00000560975 EPM2AB3EWF7 344 aa11.27□□□□□ -0.6
TPM1-228ENST00000560975 KLKP1Q107X0 134 aa11.27□□□□□ -0.6
TPM1-228ENST00000560975 MRAPQ8TCY5 172 aa11.27□□□□□ -0.6
TPM1-228ENST00000560975 GCN1Q92616 2671 aaKnown RBP11.27□□□□□ -0.61
TPM1-228ENST00000560975 LOC110117498A0A087WWA1 95 aa11.26□□□□□ -0.61
TPM1-228ENST00000560975 C6orf223Q8N319 242 aa11.26□□□□□ -0.61
TPM1-228ENST00000560975 CSNK1G2-AS1Q8NCQ2 148 aa11.26□□□□□ -0.61
TPM1-228ENST00000560975 TM2D3Q9BRN9 247 aa11.26□□□□□ -0.61
TPM1-228ENST00000560975 WFDC11Q8NEX6 87 aa11.26□□□□□ -0.61
TPM1-228ENST00000560975 FP248Q71RG6 208 aaPredicted RBP11.26□□□□□ -0.61
TPM1-228ENST00000560975 CHCHD10Q8WYQ3 142 aaPredicted RBP11.26□□□□□ -0.61
TPM1-228ENST00000560975 LINC00474Q9P2X8 69 aa11.25□□□□□ -0.61
TPM1-228ENST00000560975 COX17Q14061 63 aa11.24□□□□□ -0.61
TPM1-228ENST00000560975 C10orf25Q5T742 122 aa11.24□□□□□ -0.61
TPM1-228ENST00000560975 A0A1B0GUV1 79 aa11.24□□□□□ -0.61
TPM1-228ENST00000560975 C1orf43Q9BWL3 253 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms