RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 LINC01546A6NGU7 62 aa5.1□□□□□ -1.59
SNX1-207ENST00000559401 NDUFC2-KCTD14E9PQ53 114 aa5.1□□□□□ -1.59
SNX1-207ENST00000559401 TLX1NBP0CAT3 122 aa5.1□□□□□ -1.59
SNX1-207ENST00000559401 PMVKQ15126 192 aa5.1□□□□□ -1.59
SNX1-207ENST00000559401 PHF5AQ7RTV0 110 aaKnown RBP5.1□□□□□ -1.59
SNX1-207ENST00000559401 FAM19A3Q7Z5A8 133 aa5.1□□□□□ -1.59
SNX1-207ENST00000559401 Q8IZM0 81 aa5.1□□□□□ -1.59
SNX1-207ENST00000559401 C18orf32Q8TCD1 76 aa5.1□□□□□ -1.59
SNX1-207ENST00000559401 TINCRA0A1B0GVN0 87 aa5.09□□□□□ -1.59
SNX1-207ENST00000559401 HBDP02042 147 aa5.09□□□□□ -1.59
SNX1-207ENST00000559401 PMCHL1Q16048 86 aa5.09□□□□□ -1.59
SNX1-207ENST00000559401 CST9LQ9H4G1 147 aa5.09□□□□□ -1.59
SNX1-207ENST00000559401 SMIM1B2RUZ4 78 aa5.08□□□□□ -1.6
SNX1-207ENST00000559401 F8VRH5 84 aa5.08□□□□□ -1.6
SNX1-207ENST00000559401 M0QXV9 152 aa5.08□□□□□ -1.6
SNX1-207ENST00000559401 SPINK8P0C7L1 97 aa5.08□□□□□ -1.6
SNX1-207ENST00000559401 LINC00614P0C842 121 aa5.08□□□□□ -1.6
SNX1-207ENST00000559401 CXCL5P42830 114 aa5.08□□□□□ -1.6
SNX1-207ENST00000559401 RAB5BP61020 215 aa5.08□□□□□ -1.6
SNX1-207ENST00000559401 UBE2BP63146 152 aa5.08□□□□□ -1.6
SNX1-207ENST00000559401 C1orf137Q5JT78 98 aa5.08□□□□□ -1.6
SNX1-207ENST00000559401 COX7B2Q8TF08 81 aa5.08□□□□□ -1.6
SNX1-207ENST00000559401 PSORS1C2Q9UIG4 136 aa5.08□□□□□ -1.6
SNX1-207ENST00000559401 HERC1Q15751 4861 aa5.08□□□□□ -1.6
SNX1-207ENST00000559401 A0A096LNJ9 63 aa5.07□□□□□ -1.6
SNX1-207ENST00000559401 H3BRM9 83 aa5.07□□□□□ -1.6
SNX1-207ENST00000559401 PDZD11Q5EBL8 140 aa5.07□□□□□ -1.6
SNX1-207ENST00000559401 REG3GQ6UW15 175 aa5.07□□□□□ -1.6
SNX1-207ENST00000559401 SPINK6Q6UWN8 80 aa5.07□□□□□ -1.6
SNX1-207ENST00000559401 CBLN2Q8IUK8 224 aa5.07□□□□□ -1.6
SNX1-207ENST00000559401 URB1-AS1Q96HZ7 61 aa5.07□□□□□ -1.6
SNX1-207ENST00000559401 IGLV5-45A0A087WSX0 123 aa5.06□□□□□ -1.6
SNX1-207ENST00000559401 SCO1O75880 301 aa5.06□□□□□ -1.6
SNX1-207ENST00000559401 ATP5LO75964 103 aa5.06□□□□□ -1.6
SNX1-207ENST00000559401 C9orf129Q5T035 196 aaKnown RBP5.06□□□□□ -1.6
SNX1-207ENST00000559401 SERTAD4-AS1Q5TG53 156 aa5.06□□□□□ -1.6
SNX1-207ENST00000559401 XAGE1AQ9HD64 81 aa5.06□□□□□ -1.6
SNX1-207ENST00000559401 IGLC3P0DOY3 106 aa5.05□□□□□ -1.6
SNX1-207ENST00000559401 LRP1Q07954 4544 aaKnown RBP5.05□□□□□ -1.6
SNX1-207ENST00000559401 MT1HL1P0DM35 61 aa5.04□□□□□ -1.6
SNX1-207ENST00000559401 ZNF22P17026 224 aaPredicted RBP5.04□□□□□ -1.6
SNX1-207ENST00000559401 TMEM170BQ5T4T1 132 aa5.04□□□□□ -1.6
SNX1-207ENST00000559401 BAGE3Q86Y29 109 aa5.04□□□□□ -1.6
SNX1-207ENST00000559401 YPEL4Q96NS1 127 aa5.04□□□□□ -1.6
SNX1-207ENST00000559401 HSBP1O75506 76 aa5.03□□□□□ -1.6
SNX1-207ENST00000559401 IGLV7-43P04211 117 aa5.03□□□□□ -1.6
SNX1-207ENST00000559401 SRSF9Q13242 221 aaKnown RBP eCLIP5.03□□□□□ -1.6
SNX1-207ENST00000559401 KRTAP11-1Q8IUC1 163 aa5.03□□□□□ -1.6
SNX1-207ENST00000559401 KRTAP7-1Q8IUC3 87 aa5.03□□□□□ -1.6
SNX1-207ENST00000559401 CHCHD1Q96BP2 118 aaKnown RBP5.03□□□□□ -1.6
SNX1-207ENST00000559401 LINC01600Q96MT4 127 aa5.03□□□□□ -1.6
SNX1-207ENST00000559401 PLA2G2DQ9UNK4 145 aa5.03□□□□□ -1.6
SNX1-207ENST00000559401 CHTOPQ9Y3Y2 248 aaKnown RBP5.03□□□□□ -1.6
SNX1-207ENST00000559401 PKHD1L1Q86WI1 4243 aa5.03□□□□□ -1.6
SNX1-207ENST00000559401 FAT3Q8TDW7 4589 aa5.02□□□□□ -1.61
SNX1-207ENST00000559401 C11orf86A6NJI1 115 aa5.02□□□□□ -1.61
SNX1-207ENST00000559401 PFN2P35080 140 aa5.02□□□□□ -1.61
SNX1-207ENST00000559401 DIRC1Q969H9 104 aa5.02□□□□□ -1.61
SNX1-207ENST00000559401 IFI27L1Q96BM0 104 aa5.02□□□□□ -1.61
SNX1-207ENST00000559401 C22orf24Q9Y442 160 aa5.02□□□□□ -1.61
SNX1-207ENST00000559401 IGLV5-39A0A0G2JS06 123 aa5.01□□□□□ -1.61
SNX1-207ENST00000559401 H0Y8G0 127 aa5.01□□□□□ -1.61
SNX1-207ENST00000559401 TRGC2P03986 189 aa5.01□□□□□ -1.61
SNX1-207ENST00000559401 LBHQ53QV2 105 aaPredicted RBP5.01□□□□□ -1.61
SNX1-207ENST00000559401 FAM19A2Q8N3H0 131 aa5.01□□□□□ -1.61
SNX1-207ENST00000559401 ZNF625Q96I27 306 aaPredicted RBP5.01□□□□□ -1.61
SNX1-207ENST00000559401 GAGE10A6NGK3 116 aa5□□□□□ -1.61
SNX1-207ENST00000559401 COLCA2A8K830 154 aa5□□□□□ -1.61
SNX1-207ENST00000559401 MRPL55Q7Z7F7 128 aaKnown RBP5□□□□□ -1.61
SNX1-207ENST00000559401 NKAPP1Q8N9T2 125 aa5□□□□□ -1.61
SNX1-207ENST00000559401 ERG28Q9UKR5 140 aa5□□□□□ -1.61
SNX1-207ENST00000559401 TRAV12-1A0A0B4J245 112 aa4.99□□□□□ -1.61
SNX1-207ENST00000559401 RPL37AP8A6NKH3 93 aa4.99□□□□□ -1.61
SNX1-207ENST00000559401 H0Y9J4 135 aa4.99□□□□□ -1.61
SNX1-207ENST00000559401 NUPR1O60356 82 aa4.98□□□□□ -1.61
SNX1-207ENST00000559401 SERF1AO75920 110 aa4.98□□□□□ -1.61
SNX1-207ENST00000559401 LEPROTL1O95214 131 aa4.98□□□□□ -1.61
SNX1-207ENST00000559401 ODF1Q14990 250 aa4.98□□□□□ -1.61
SNX1-207ENST00000559401 SFTA2Q6UW10 78 aa4.98□□□□□ -1.61
SNX1-207ENST00000559401 LINC00167Q96N53 147 aa4.98□□□□□ -1.61
SNX1-207ENST00000559401 TP73-AS1Q9UF72 201 aa4.98□□□□□ -1.61
SNX1-207ENST00000559401 A0A0U1RRA0 63 aa4.97□□□□□ -1.61
SNX1-207ENST00000559401 TMEM223A0PJW6 202 aa4.97□□□□□ -1.61
SNX1-207ENST00000559401 FABP4P15090 132 aa4.97□□□□□ -1.61
SNX1-207ENST00000559401 LINC00158P58513 81 aa4.97□□□□□ -1.61
SNX1-207ENST00000559401 SND1-IT1Q9HBX3 110 aa4.97□□□□□ -1.61
SNX1-207ENST00000559401 IGKV2-28A0A075B6P5 120 aa4.96□□□□□ -1.62
SNX1-207ENST00000559401 IGKV2D-28P01615 120 aa4.96□□□□□ -1.62
SNX1-207ENST00000559401 RPL28P46779 137 aaKnown RBP4.96□□□□□ -1.62
SNX1-207ENST00000559401 KRTAP10-8P60410 259 aa4.96□□□□□ -1.62
SNX1-207ENST00000559401 RPL24P83731 157 aaKnown RBP4.96□□□□□ -1.62
SNX1-207ENST00000559401 COX17Q14061 63 aa4.96□□□□□ -1.62
SNX1-207ENST00000559401 MEIG1Q5JSS6 88 aa4.96□□□□□ -1.62
SNX1-207ENST00000559401 PRR26Q8N8Z3 221 aa4.96□□□□□ -1.62
SNX1-207ENST00000559401 IGLV5-37A0A075B6J1 123 aa4.95□□□□□ -1.62
SNX1-207ENST00000559401 ZNF861PO60384 105 aa4.95□□□□□ -1.62
SNX1-207ENST00000559401 BCE1O60756 84 aa4.95□□□□□ -1.62
SNX1-207ENST00000559401 UBE2AP49459 152 aa4.95□□□□□ -1.62
SNX1-207ENST00000559401 LINC00310P59036 64 aa4.95□□□□□ -1.62
SNX1-207ENST00000559401 HSPB8Q9UJY1 196 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms