RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 MUC4Q99102 2169 aa4.12□□□□□ -1.75
USP3-212ENST00000559276 IGHV1OR15-1A0A075B7D0 117 aa4.11□□□□□ -1.75
USP3-212ENST00000559276 F8WDY8 70 aa4.11□□□□□ -1.75
USP3-212ENST00000559276 LST1O00453 97 aa4.11□□□□□ -1.75
USP3-212ENST00000559276 IGHV3-30-3P0DP02 117 aa4.11□□□□□ -1.75
USP3-212ENST00000559276 C2orf82Q6UX34 121 aa4.11□□□□□ -1.75
USP3-212ENST00000559276 Q6ZQT7 251 aa4.11□□□□□ -1.75
USP3-212ENST00000559276 NTN5Q8WTR8 489 aaPredicted RBP4.11□□□□□ -1.75
USP3-212ENST00000559276 LITAFQ99732 161 aa4.11□□□□□ -1.75
USP3-212ENST00000559276 TMEM126AQ9H061 195 aa4.11□□□□□ -1.75
USP3-212ENST00000559276 LRP1BQ9NZR2 4599 aa4.11□□□□□ -1.75
USP3-212ENST00000559276 IGLV5-45A0A087WSX0 123 aa4.1□□□□□ -1.75
USP3-212ENST00000559276 A8MTW9 85 aa4.1□□□□□ -1.75
USP3-212ENST00000559276 TRIAP1O43715 76 aa4.1□□□□□ -1.75
USP3-212ENST00000559276 CIRBPQ14011 172 aaKnown RBP4.1□□□□□ -1.75
USP3-212ENST00000559276 C1orf158Q8N1D5 194 aa4.1□□□□□ -1.75
USP3-212ENST00000559276 TMEM101Q96IK0 257 aa4.1□□□□□ -1.75
USP3-212ENST00000559276 VSIG2Q96IQ7 327 aa4.1□□□□□ -1.75
USP3-212ENST00000559276 LINC00467Q9BRT7 94 aa4.1□□□□□ -1.75
USP3-212ENST00000559276 NDUFA12Q9UI09 145 aa4.1□□□□□ -1.75
USP3-212ENST00000559276 TRAV12-3A0A0B4J271 114 aa4.09□□□□□ -1.75
USP3-212ENST00000559276 A0A0J9YXV3 536 aa4.09□□□□□ -1.75
USP3-212ENST00000559276 SMIM9A6NGZ8 99 aa4.09□□□□□ -1.75
USP3-212ENST00000559276 F6UB75 175 aa4.09□□□□□ -1.75
USP3-212ENST00000559276 H7C423 109 aa4.09□□□□□ -1.75
USP3-212ENST00000559276 NDUFA1O15239 70 aa4.09□□□□□ -1.75
USP3-212ENST00000559276 IGKV3-20P01619 116 aa4.09□□□□□ -1.75
USP3-212ENST00000559276 TRACP01848 142 aa4.09□□□□□ -1.75
USP3-212ENST00000559276 PRM2P04554 102 aa4.09□□□□□ -1.75
USP3-212ENST00000559276 SPART-AS1P0CW21 52 aa4.09□□□□□ -1.75
USP3-212ENST00000559276 EMP1P54849 157 aa4.09□□□□□ -1.75
USP3-212ENST00000559276 FAM222AQ5U5X8 452 aa4.09□□□□□ -1.75
USP3-212ENST00000559276 SFTA2Q6UW10 78 aa4.09□□□□□ -1.75
USP3-212ENST00000559276 C15orf53Q8NAA6 179 aa4.09□□□□□ -1.75
USP3-212ENST00000559276 APOBP04114 4563 aaKnown RBP4.09□□□□□ -1.75
USP3-212ENST00000559276 TRAV4A0A0B4J268 109 aa4.08□□□□□ -1.76
USP3-212ENST00000559276 TEX49A0A1B0GTD5 131 aa4.08□□□□□ -1.76
USP3-212ENST00000559276 PLAC8L1A1L4L8 177 aa4.08□□□□□ -1.76
USP3-212ENST00000559276 CXCL5P42830 114 aa4.08□□□□□ -1.76
USP3-212ENST00000559276 ZNF415Q09FC8 603 aa4.08□□□□□ -1.76
USP3-212ENST00000559276 FAM74A4Q5TZK3 123 aa4.08□□□□□ -1.76
USP3-212ENST00000559276 FAM19A3Q7Z5A8 133 aa4.08□□□□□ -1.76
USP3-212ENST00000559276 LINC00643Q86TS7 51 aa4.08□□□□□ -1.76
USP3-212ENST00000559276 DAND5Q8N907 189 aa4.08□□□□□ -1.76
USP3-212ENST00000559276 TNFRSF18Q9Y5U5 241 aa4.08□□□□□ -1.76
USP3-212ENST00000559276 IGHV3OR16-12A0A075B7B8 117 aa4.07□□□□□ -1.76
USP3-212ENST00000559276 B5MCH6 92 aa4.07□□□□□ -1.76
USP3-212ENST00000559276 COX7A2LO14548 114 aa4.07□□□□□ -1.76
USP3-212ENST00000559276 PRSS2P07478 247 aa4.07□□□□□ -1.76
USP3-212ENST00000559276 INAFM2P0DMQ5 153 aa4.07□□□□□ -1.76
USP3-212ENST00000559276 HERVK_113P63121 156 aa4.07□□□□□ -1.76
USP3-212ENST00000559276 HERV-K104P63124 156 aa4.07□□□□□ -1.76
USP3-212ENST00000559276 SDIM1Q6ZPB5 146 aa4.07□□□□□ -1.76
USP3-212ENST00000559276 JPT2Q9H910 190 aa4.07□□□□□ -1.76
USP3-212ENST00000559276 UBE2D4Q9Y2X8 147 aa4.07□□□□□ -1.76
USP3-212ENST00000559276 CSDC2Q9Y534 153 aaKnown RBP4.07□□□□□ -1.76
USP3-212ENST00000559276 DNAH5Q8TE73 4624 aa4.07□□□□□ -1.76
USP3-212ENST00000559276 IGLV5-39A0A0G2JS06 123 aa4.06□□□□□ -1.76
USP3-212ENST00000559276 H7C2G1 150 aa4.06□□□□□ -1.76
USP3-212ENST00000559276 IGHV3-53P01767 116 aa4.06□□□□□ -1.76
USP3-212ENST00000559276 HTN3P15516 51 aa4.06□□□□□ -1.76
USP3-212ENST00000559276 SS18L2Q9UHA2 77 aa4.06□□□□□ -1.76
USP3-212ENST00000559276 TRBV10-1A0A0K0K1A3 114 aa4.05□□□□□ -1.76
USP3-212ENST00000559276 C1orf134Q5TEV5 83 aa4.05□□□□□ -1.76
USP3-212ENST00000559276 UBE2DNLQ8IWF7 75 aa4.05□□□□□ -1.76
USP3-212ENST00000559276 FAM104AQ969W3 186 aa4.05□□□□□ -1.76
USP3-212ENST00000559276 CHCHD7Q9BUK0 85 aa4.05□□□□□ -1.76
USP3-212ENST00000559276 KRTAP1-5Q9BYS1 174 aa4.05□□□□□ -1.76
USP3-212ENST00000559276 TRAV13-2A0A0B4J235 113 aa4.04□□□□□ -1.76
USP3-212ENST00000559276 NBDYA0A0U1RRE5 68 aa4.04□□□□□ -1.76
USP3-212ENST00000559276 UQCRQO14949 82 aa4.04□□□□□ -1.76
USP3-212ENST00000559276 CDK2AP2O75956 126 aa4.04□□□□□ -1.76
USP3-212ENST00000559276 DAD1P61803 113 aa4.04□□□□□ -1.76
USP3-212ENST00000559276 SPINK13Q1W4C9 94 aa4.04□□□□□ -1.76
USP3-212ENST00000559276 ADAMTSL4-AS1Q5T5F5 129 aa4.04□□□□□ -1.76
USP3-212ENST00000559276 LINC00308Q8TCZ7 52 aa4.04□□□□□ -1.76
USP3-212ENST00000559276 OPRPNQ99935 248 aaPredicted RBP4.04□□□□□ -1.76
USP3-212ENST00000559276 LINC00588Q9Y4M8 146 aa4.04□□□□□ -1.76
USP3-212ENST00000559276 HERC1Q15751 4861 aa4.03□□□□□ -1.76
USP3-212ENST00000559276 IGHV3-64A0A075B6Q5 118 aa4.03□□□□□ -1.76
USP3-212ENST00000559276 TRAV12-2A0A075B6T6 113 aa4.03□□□□□ -1.76
USP3-212ENST00000559276 TRAV8-3A0A0A6YYJ7 113 aa4.03□□□□□ -1.76
USP3-212ENST00000559276 CCDC179H3BU77 68 aa4.03□□□□□ -1.76
USP3-212ENST00000559276 RS1O15537 224 aa4.03□□□□□ -1.76
USP3-212ENST00000559276 DAZ2Q13117 558 aaKnown RBP4.03□□□□□ -1.76
USP3-212ENST00000559276 MEIG1Q5JSS6 88 aa4.03□□□□□ -1.76
USP3-212ENST00000559276 DAZ4Q86SG3 579 aaKnown RBP4.03□□□□□ -1.76
USP3-212ENST00000559276 DAZ3Q9NR90 486 aaKnown RBP4.03□□□□□ -1.76
USP3-212ENST00000559276 A0A1B0GX51 115 aa4.02□□□□□ -1.77
USP3-212ENST00000559276 LYRM9A8MSI8 78 aa4.02□□□□□ -1.77
USP3-212ENST00000559276 C16orf90A8MZG2 172 aa4.02□□□□□ -1.77
USP3-212ENST00000559276 USP17L23D6RBM5 183 aa4.02□□□□□ -1.77
USP3-212ENST00000559276 H0YGX0 51 aa4.02□□□□□ -1.77
USP3-212ENST00000559276 ATOX1O00244 68 aa4.02□□□□□ -1.77
USP3-212ENST00000559276 INSP01308 110 aa4.02□□□□□ -1.77
USP3-212ENST00000559276 DEFB130BP0DP73 79 aa4.02□□□□□ -1.77
USP3-212ENST00000559276 DEFB130AP0DP74 79 aa4.02□□□□□ -1.77
USP3-212ENST00000559276 RPL28P46779 137 aaKnown RBP4.02□□□□□ -1.77
USP3-212ENST00000559276 C5orf38Q86SI9 138 aa4.02□□□□□ -1.77
USP3-212ENST00000559276 C6orf223Q8N319 242 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms