RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 C6orf226Q5I0X4 101 aa11.49□□□□□ -0.57
SPG11-215ENST00000559193 H0YGX0 51 aa11.48□□□□□ -0.57
SPG11-215ENST00000559193 KRTAP10-3P60369 221 aa11.48□□□□□ -0.57
SPG11-215ENST00000559193 C9orf129Q5T035 196 aaKnown RBP11.48□□□□□ -0.57
SPG11-215ENST00000559193 GAGE2AQ6NT46 116 aa11.48□□□□□ -0.57
SPG11-215ENST00000559193 X6R8D5 127 aa11.48□□□□□ -0.57
SPG11-215ENST00000559193 ATP5G1P05496 136 aa11.48□□□□□ -0.57
SPG11-215ENST00000559193 CLPSL2Q6UWE3 100 aa11.48□□□□□ -0.57
SPG11-215ENST00000559193 FAM236AA0A1B0GUQ0 79 aa11.47□□□□□ -0.57
SPG11-215ENST00000559193 A0A1B0GUV1 79 aa11.47□□□□□ -0.57
SPG11-215ENST00000559193 FAM236BA0A1B0GV22 79 aa11.47□□□□□ -0.57
SPG11-215ENST00000559193 SS18Q15532 418 aa11.47□□□□□ -0.57
SPG11-215ENST00000559193 TENM4Q6N022 2769 aa11.46□□□□□ -0.57
SPG11-215ENST00000559193 A0A096LPF7 62 aa11.46□□□□□ -0.58
SPG11-215ENST00000559193 LY6G6DO95868 133 aa11.46□□□□□ -0.58
SPG11-215ENST00000559193 Q8IZM0 81 aa11.46□□□□□ -0.58
SPG11-215ENST00000559193 OR13C6PQ8NH95 151 aa11.46□□□□□ -0.58
SPG11-215ENST00000559193 LECT2O14960 151 aa11.45□□□□□ -0.58
SPG11-215ENST00000559193 LINC00482Q8N8I6 264 aa11.45□□□□□ -0.58
SPG11-215ENST00000559193 PRO0255Q9UI72 69 aa11.45□□□□□ -0.58
SPG11-215ENST00000559193 FN1P02751 2386 aaKnown RBP11.44□□□□□ -0.58
SPG11-215ENST00000559193 OBSCN-AS1Q96MR7 158 aa11.43□□□□□ -0.58
SPG11-215ENST00000559193 C14orf132Q9NPU4 83 aa11.43□□□□□ -0.58
SPG11-215ENST00000559193 LINC01561Q8N1V8 128 aa11.41□□□□□ -0.58
SPG11-215ENST00000559193 SLPIP03973 132 aa11.41□□□□□ -0.58
SPG11-215ENST00000559193 SMIM9A6NGZ8 99 aa11.4□□□□□ -0.58
SPG11-215ENST00000559193 KIAA0087Q14695 138 aa11.4□□□□□ -0.58
SPG11-215ENST00000559193 CXCL5P42830 114 aa11.39□□□□□ -0.59
SPG11-215ENST00000559193 LINC00269Q8N2A0 174 aa11.39□□□□□ -0.59
SPG11-215ENST00000559193 Q8N3U1 123 aa11.39□□□□□ -0.59
SPG11-215ENST00000559193 SPATA3Q8NHX4 192 aa11.39□□□□□ -0.59
SPG11-215ENST00000559193 GCN1Q92616 2671 aaKnown RBP11.39□□□□□ -0.59
SPG11-215ENST00000559193 NANOS2P60321 138 aaKnown RBP11.39□□□□□ -0.59
SPG11-215ENST00000559193 KLK5Q9Y337 293 aaPredicted RBP11.39□□□□□ -0.59
SPG11-215ENST00000559193 NCR3O14931 201 aa11.38□□□□□ -0.59
SPG11-215ENST00000559193 PRR3P79522 188 aaKnown RBP11.38□□□□□ -0.59
SPG11-215ENST00000559193 SMR3AQ99954 134 aa11.38□□□□□ -0.59
SPG11-215ENST00000559193 DEFB4AO15263 64 aa11.37□□□□□ -0.59
SPG11-215ENST00000559193 CD164L2Q6UWJ8 174 aa11.37□□□□□ -0.59
SPG11-215ENST00000559193 LYRM9A8MSI8 78 aa11.37□□□□□ -0.59
SPG11-215ENST00000559193 CHCHD10Q8WYQ3 142 aaPredicted RBP11.37□□□□□ -0.59
SPG11-215ENST00000559193 IGLV10-54A0A075B6I4 117 aa11.36□□□□□ -0.59
SPG11-215ENST00000559193 ORMDL1Q9P0S3 153 aa11.36□□□□□ -0.59
SPG11-215ENST00000559193 ITPR2Q14571 2701 aa11.35□□□□□ -0.59
SPG11-215ENST00000559193 SMIM20Q8N5G0 67 aa11.35□□□□□ -0.59
SPG11-215ENST00000559193 DEFB135Q30KP9 77 aa11.35□□□□□ -0.59
SPG11-215ENST00000559193 CFAP161Q6P656 301 aa11.35□□□□□ -0.59
SPG11-215ENST00000559193 LINC00167Q96N53 147 aa11.35□□□□□ -0.59
SPG11-215ENST00000559193 LINC00846Q9NV44 126 aa11.35□□□□□ -0.59
SPG11-215ENST00000559193 NBEAL2Q6ZNJ1 2754 aa11.34□□□□□ -0.59
SPG11-215ENST00000559193 NDUFC2O95298 119 aa11.34□□□□□ -0.59
SPG11-215ENST00000559193 ANGP03950 147 aaKnown RBP11.34□□□□□ -0.59
SPG11-215ENST00000559193 REG3AQ06141 175 aa11.34□□□□□ -0.59
SPG11-215ENST00000559193 C9orf116Q5BN46 136 aaPredicted RBP11.34□□□□□ -0.59
SPG11-215ENST00000559193 C3orf56Q8N813 242 aa11.34□□□□□ -0.59
SPG11-215ENST00000559193 COX17Q14061 63 aa11.33□□□□□ -0.6
SPG11-215ENST00000559193 IGHV4-28A0A0C4DH34 117 aa11.32□□□□□ -0.6
SPG11-215ENST00000559193 Q8NDZ9 215 aa11.32□□□□□ -0.6
SPG11-215ENST00000559193 HIST1H4AP62805 103 aaKnown RBP11.31□□□□□ -0.6
SPG11-215ENST00000559193 Q8N814 137 aa11.31□□□□□ -0.6
SPG11-215ENST00000559193 A0A1B0GX51 115 aa11.31□□□□□ -0.6
SPG11-215ENST00000559193 C9orf66Q5T8R8 295 aa11.3□□□□□ -0.6
SPG11-215ENST00000559193 Q6JHZ5 121 aa11.3□□□□□ -0.6
SPG11-215ENST00000559193 C3orf22Q8N5N4 141 aa11.3□□□□□ -0.6
SPG11-215ENST00000559193 CELA1Q9UNI1 258 aa11.3□□□□□ -0.6
SPG11-215ENST00000559193 IGKV3D-7A0A0C4DH55 119 aa11.3□□□□□ -0.6
SPG11-215ENST00000559193 DAD1P61803 113 aa11.3□□□□□ -0.6
SPG11-215ENST00000559193 TMEM126AQ9H061 195 aa11.3□□□□□ -0.6
SPG11-215ENST00000559193 HIVEP2P31629 2446 aa11.29□□□□□ -0.6
SPG11-215ENST00000559193 UNC79Q9P2D8 2635 aa11.29□□□□□ -0.6
SPG11-215ENST00000559193 VWFP04275 2813 aa11.29□□□□□ -0.6
SPG11-215ENST00000559193 UQCRQO14949 82 aa11.28□□□□□ -0.6
SPG11-215ENST00000559193 CCKP06307 115 aa11.27□□□□□ -0.6
SPG11-215ENST00000559193 C10orf25Q5T742 122 aa11.27□□□□□ -0.61
SPG11-215ENST00000559193 C9orf153Q5TBE3 101 aa11.27□□□□□ -0.61
SPG11-215ENST00000559193 C6orf223Q8N319 242 aa11.26□□□□□ -0.61
SPG11-215ENST00000559193 Q8NAQ8 132 aa11.26□□□□□ -0.61
SPG11-215ENST00000559193 APOC4P55056 127 aa11.26□□□□□ -0.61
SPG11-215ENST00000559193 C6orf99Q4VX62 202 aa11.26□□□□□ -0.61
SPG11-215ENST00000559193 LINC00526Q96FQ7 95 aa11.26□□□□□ -0.61
SPG11-215ENST00000559193 C2orf48Q96LS8 159 aa11.25□□□□□ -0.61
SPG11-215ENST00000559193 UNQ6190/PRO20217Q6UXQ8 127 aa11.25□□□□□ -0.61
SPG11-215ENST00000559193 JMJD7-PLA2G4BH0Y9G9 81 aa11.24□□□□□ -0.61
SPG11-215ENST00000559193 TMEM256-PLSCR3K7ERE1 68 aa11.24□□□□□ -0.61
SPG11-215ENST00000559193 SPAG11BQ08648 103 aa11.24□□□□□ -0.61
SPG11-215ENST00000559193 ATOX1O00244 68 aa11.24□□□□□ -0.61
SPG11-215ENST00000559193 COX7CP15954 63 aa11.24□□□□□ -0.61
SPG11-215ENST00000559193 J3QKU1 62 aa11.23□□□□□ -0.61
SPG11-215ENST00000559193 FASNP49327 2511 aaKnown RBP11.23□□□□□ -0.61
SPG11-215ENST00000559193 A0A087WVE0 104 aa11.23□□□□□ -0.61
SPG11-215ENST00000559193 HTN3P15516 51 aa11.23□□□□□ -0.61
SPG11-215ENST00000559193 RPL18AQ02543 176 aaKnown RBP11.23□□□□□ -0.61
SPG11-215ENST00000559193 LELP1Q5T871 98 aa11.23□□□□□ -0.61
SPG11-215ENST00000559193 S100A7L2Q5SY68 101 aa11.22□□□□□ -0.61
SPG11-215ENST00000559193 MIFP14174 115 aa11.22□□□□□ -0.61
SPG11-215ENST00000559193 LINC00575Q6W349 94 aa11.21□□□□□ -0.61
SPG11-215ENST00000559193 CYSRT1A8MQ03 144 aa11.21□□□□□ -0.62
SPG11-215ENST00000559193 PRR34Q9NV39 138 aa11.21□□□□□ -0.62
SPG11-215ENST00000559193 A0A0J9YWU9 116 aa11.2□□□□□ -0.62
SPG11-215ENST00000559193 IGHV4-30-4P0DP06 118 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms