RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 FA2HQ7L5A8 372 aa7.7□□□□□ -1.18
SMAD3-208ENST00000558827 KRTAP7-1Q8IUC3 87 aa7.7□□□□□ -1.18
SMAD3-208ENST00000558827 TLX1NBP0CAT3 122 aa7.69□□□□□ -1.18
SMAD3-208ENST00000558827 C9orf129Q5T035 196 aaKnown RBP7.69□□□□□ -1.18
SMAD3-208ENST00000558827 ERASQ7Z444 233 aa7.69□□□□□ -1.18
SMAD3-208ENST00000558827 LINC01600Q96MT4 127 aa7.69□□□□□ -1.18
SMAD3-208ENST00000558827 TIMM17AQ99595 171 aa7.69□□□□□ -1.18
SMAD3-208ENST00000558827 TRBV30A0A0K0K1B3 111 aa7.68□□□□□ -1.18
SMAD3-208ENST00000558827 G0S2P27469 103 aa7.68□□□□□ -1.18
SMAD3-208ENST00000558827 HERVK_113P63121 156 aa7.68□□□□□ -1.18
SMAD3-208ENST00000558827 PAPPA-AS1Q5QFB9 102 aa7.68□□□□□ -1.18
SMAD3-208ENST00000558827 LINC01561Q8N1V8 128 aa7.68□□□□□ -1.18
SMAD3-208ENST00000558827 SMCO4Q9NRQ5 59 aa7.68□□□□□ -1.18
SMAD3-208ENST00000558827 NDUFC2-KCTD14E9PQ53 114 aa7.67□□□□□ -1.18
SMAD3-208ENST00000558827 NDUFA6P56556 154 aa7.67□□□□□ -1.18
SMAD3-208ENST00000558827 REG3GQ6UW15 175 aa7.67□□□□□ -1.18
SMAD3-208ENST00000558827 XAGE1AQ9HD64 81 aa7.67□□□□□ -1.18
SMAD3-208ENST00000558827 TRAPPC1Q9Y5R8 145 aa7.67□□□□□ -1.18
SMAD3-208ENST00000558827 M0QXV9 152 aa7.66□□□□□ -1.18
SMAD3-208ENST00000558827 NPSP0C0P6 89 aa7.66□□□□□ -1.18
SMAD3-208ENST00000558827 SPINK8P0C7L1 97 aa7.66□□□□□ -1.18
SMAD3-208ENST00000558827 UBE2BP63146 152 aa7.66□□□□□ -1.18
SMAD3-208ENST00000558827 PMCHL1Q16048 86 aa7.66□□□□□ -1.18
SMAD3-208ENST00000558827 FAM19A3Q7Z5A8 133 aa7.66□□□□□ -1.18
SMAD3-208ENST00000558827 CST9LQ9H4G1 147 aa7.66□□□□□ -1.18
SMAD3-208ENST00000558827 SEC11AP67812 179 aa7.65□□□□□ -1.18
SMAD3-208ENST00000558827 CBLN2Q8IUK8 224 aa7.65□□□□□ -1.18
SMAD3-208ENST00000558827 Q8IZM0 81 aa7.65□□□□□ -1.18
SMAD3-208ENST00000558827 URB1-AS1Q96HZ7 61 aa7.65□□□□□ -1.18
SMAD3-208ENST00000558827 UBR4Q5T4S7 5183 aa7.64□□□□□ -1.19
SMAD3-208ENST00000558827 LINC01546A6NGU7 62 aa7.64□□□□□ -1.19
SMAD3-208ENST00000558827 SMIM1B2RUZ4 78 aa7.64□□□□□ -1.19
SMAD3-208ENST00000558827 IGLV7-43P04211 117 aa7.64□□□□□ -1.19
SMAD3-208ENST00000558827 KRTAP10-8P60410 259 aa7.64□□□□□ -1.19
SMAD3-208ENST00000558827 RAB5BP61020 215 aa7.64□□□□□ -1.19
SMAD3-208ENST00000558827 COX7B2Q8TF08 81 aa7.64□□□□□ -1.19
SMAD3-208ENST00000558827 TINCRA0A1B0GVN0 87 aa7.63□□□□□ -1.19
SMAD3-208ENST00000558827 PMVKQ15126 192 aa7.63□□□□□ -1.19
SMAD3-208ENST00000558827 C18orf32Q8TCD1 76 aa7.63□□□□□ -1.19
SMAD3-208ENST00000558827 A0A096LNJ9 63 aa7.62□□□□□ -1.19
SMAD3-208ENST00000558827 F8VRH5 84 aa7.62□□□□□ -1.19
SMAD3-208ENST00000558827 S100A1P23297 94 aa7.62□□□□□ -1.19
SMAD3-208ENST00000558827 LINC00614P0C842 121 aa7.61□□□□□ -1.19
SMAD3-208ENST00000558827 PDZD11Q5EBL8 140 aa7.61□□□□□ -1.19
SMAD3-208ENST00000558827 C22orf24Q9Y442 160 aa7.61□□□□□ -1.19
SMAD3-208ENST00000558827 ATP6V1G1O75348 118 aa7.6□□□□□ -1.19
SMAD3-208ENST00000558827 PRR26Q8N8Z3 221 aa7.6□□□□□ -1.19
SMAD3-208ENST00000558827 YPEL4Q96NS1 127 aa7.6□□□□□ -1.19
SMAD3-208ENST00000558827 IGLV5-45A0A087WSX0 123 aa7.59□□□□□ -1.19
SMAD3-208ENST00000558827 GAGE10A6NGK3 116 aa7.59□□□□□ -1.19
SMAD3-208ENST00000558827 DIRC1Q969H9 104 aa7.59□□□□□ -1.19
SMAD3-208ENST00000558827 RPL37AP8A6NKH3 93 aa7.58□□□□□ -1.2
SMAD3-208ENST00000558827 HBDP02042 147 aa7.58□□□□□ -1.2
SMAD3-208ENST00000558827 LINC01549A6NIU2 74 aa7.57□□□□□ -1.2
SMAD3-208ENST00000558827 H0Y9J4 135 aa7.57□□□□□ -1.2
SMAD3-208ENST00000558827 H3BRM9 83 aa7.57□□□□□ -1.2
SMAD3-208ENST00000558827 SCO1O75880 301 aa7.57□□□□□ -1.2
SMAD3-208ENST00000558827 IGLC3P0DOY3 106 aa7.57□□□□□ -1.2
SMAD3-208ENST00000558827 ZNF22P17026 224 aaPredicted RBP7.57□□□□□ -1.2
SMAD3-208ENST00000558827 PFN2P35080 140 aa7.57□□□□□ -1.2
SMAD3-208ENST00000558827 CXCL5P42830 114 aa7.57□□□□□ -1.2
SMAD3-208ENST00000558827 BAGE3Q86Y29 109 aa7.57□□□□□ -1.2
SMAD3-208ENST00000558827 ZNF625Q96I27 306 aaPredicted RBP7.57□□□□□ -1.2
SMAD3-208ENST00000558827 LRP2P98164 4655 aa7.55□□□□□ -1.2
SMAD3-208ENST00000558827 C11orf86A6NJI1 115 aa7.55□□□□□ -1.2
SMAD3-208ENST00000558827 LBHQ53QV2 105 aaPredicted RBP7.55□□□□□ -1.2
SMAD3-208ENST00000558827 LINC00167Q96N53 147 aa7.55□□□□□ -1.2
SMAD3-208ENST00000558827 COLCA2A8K830 154 aa7.54□□□□□ -1.2
SMAD3-208ENST00000558827 ATP5LO75964 103 aa7.54□□□□□ -1.2
SMAD3-208ENST00000558827 TRGC2P03986 189 aa7.54□□□□□ -1.2
SMAD3-208ENST00000558827 TMEM170BQ5T4T1 132 aa7.54□□□□□ -1.2
SMAD3-208ENST00000558827 MRPL55Q7Z7F7 128 aaKnown RBP7.54□□□□□ -1.2
SMAD3-208ENST00000558827 CHTOPQ9Y3Y2 248 aaKnown RBP7.53□□□□□ -1.2
SMAD3-208ENST00000558827 IGLV5-39A0A0G2JS06 123 aa7.52□□□□□ -1.21
SMAD3-208ENST00000558827 A0A0U1RRA0 63 aa7.52□□□□□ -1.21
SMAD3-208ENST00000558827 KRTAP1-4P0C5Y4 121 aa7.52□□□□□ -1.21
SMAD3-208ENST00000558827 FAM19A2Q8N3H0 131 aa7.52□□□□□ -1.21
SMAD3-208ENST00000558827 ZNF861PO60384 105 aa7.51□□□□□ -1.21
SMAD3-208ENST00000558827 NKAPP1Q8N9T2 125 aa7.51□□□□□ -1.21
SMAD3-208ENST00000558827 H0Y8G0 127 aa7.5□□□□□ -1.21
SMAD3-208ENST00000558827 IFI27L1Q96BM0 104 aa7.5□□□□□ -1.21
SMAD3-208ENST00000558827 TP73-AS1Q9UF72 201 aa7.5□□□□□ -1.21
SMAD3-208ENST00000558827 ERG28Q9UKR5 140 aa7.5□□□□□ -1.21
SMAD3-208ENST00000558827 IGKV2-28A0A075B6P5 120 aa7.49□□□□□ -1.21
SMAD3-208ENST00000558827 NUPR1O60356 82 aa7.49□□□□□ -1.21
SMAD3-208ENST00000558827 IGKV2D-28P01615 120 aa7.49□□□□□ -1.21
SMAD3-208ENST00000558827 SND1-IT1Q9HBX3 110 aa7.49□□□□□ -1.21
SMAD3-208ENST00000558827 BCE1O60756 84 aa7.48□□□□□ -1.21
SMAD3-208ENST00000558827 Q8NDZ9 215 aa7.48□□□□□ -1.21
SMAD3-208ENST00000558827 CHCHD1Q96BP2 118 aaKnown RBP7.48□□□□□ -1.21
SMAD3-208ENST00000558827 ANAPC11Q9NYG5 84 aa7.48□□□□□ -1.21
SMAD3-208ENST00000558827 HSBP1O75506 76 aa7.47□□□□□ -1.21
SMAD3-208ENST00000558827 LINC00158P58513 81 aa7.47□□□□□ -1.21
SMAD3-208ENST00000558827 IGLV1-50A0A075B6I6 118 aa7.46□□□□□ -1.22
SMAD3-208ENST00000558827 IGLV5-37A0A075B6J1 123 aa7.46□□□□□ -1.22
SMAD3-208ENST00000558827 TMEM223A0PJW6 202 aa7.46□□□□□ -1.22
SMAD3-208ENST00000558827 VPREB1P12018 145 aa7.46□□□□□ -1.22
SMAD3-208ENST00000558827 RPL28P46779 137 aaKnown RBP7.46□□□□□ -1.22
SMAD3-208ENST00000558827 UBE2AP49459 152 aa7.46□□□□□ -1.22
SMAD3-208ENST00000558827 TMEM238C9JI98 176 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms