RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 C6orf226Q5I0X4 101 aa9.49□□□□□ -0.89
RPL28-206ENST00000558752 PACRGQ96M98 296 aaPredicted RBP9.49□□□□□ -0.89
RPL28-206ENST00000558752 LINC00614P0C842 121 aa9.48□□□□□ -0.89
RPL28-206ENST00000558752 C9orf116Q5BN46 136 aaPredicted RBP9.48□□□□□ -0.89
RPL28-206ENST00000558752 C10orf25Q5T742 122 aa9.48□□□□□ -0.89
RPL28-206ENST00000558752 Q8IZM0 81 aa9.48□□□□□ -0.89
RPL28-206ENST00000558752 TINCRA0A1B0GVN0 87 aa9.47□□□□□ -0.89
RPL28-206ENST00000558752 A0A1W2PNN7 141 aa9.47□□□□□ -0.89
RPL28-206ENST00000558752 KRTAP10-8P60410 259 aa9.47□□□□□ -0.89
RPL28-206ENST00000558752 CKS1BP61024 79 aa9.47□□□□□ -0.89
RPL28-206ENST00000558752 CST9LQ9H4G1 147 aa9.47□□□□□ -0.89
RPL28-206ENST00000558752 C6orf48Q9UBA6 75 aa9.47□□□□□ -0.89
RPL28-206ENST00000558752 PMVKQ15126 192 aa9.46□□□□□ -0.9
RPL28-206ENST00000558752 CDKN2A-AS1Q9UH64 79 aa9.46□□□□□ -0.9
RPL28-206ENST00000558752 NDUFC2-KCTD14E9PQ53 114 aa9.45□□□□□ -0.9
RPL28-206ENST00000558752 C18orf32Q8TCD1 76 aa9.45□□□□□ -0.9
RPL28-206ENST00000558752 IGLV5-45A0A087WSX0 123 aa9.44□□□□□ -0.9
RPL28-206ENST00000558752 CXCL5P42830 114 aa9.44□□□□□ -0.9
RPL28-206ENST00000558752 PDZD11Q5EBL8 140 aa9.44□□□□□ -0.9
RPL28-206ENST00000558752 LINC00469Q8N7U9 141 aa9.44□□□□□ -0.9
RPL28-206ENST00000558752 TOMM7Q9P0U1 55 aa9.44□□□□□ -0.9
RPL28-206ENST00000558752 SRSF9Q13242 221 aaKnown RBP eCLIP9.43□□□□□ -0.9
RPL28-206ENST00000558752 C2orf82Q6UX34 121 aa9.43□□□□□ -0.9
RPL28-206ENST00000558752 HBDP02042 147 aa9.42□□□□□ -0.9
RPL28-206ENST00000558752 GAGE2EQ4V326 116 aa9.42□□□□□ -0.9
RPL28-206ENST00000558752 YPEL4Q96NS1 127 aa9.42□□□□□ -0.9
RPL28-206ENST00000558752 GAGE2DQ9UEU5 116 aa9.42□□□□□ -0.9
RPL28-206ENST00000558752 F8VRH5 84 aa9.41□□□□□ -0.9
RPL28-206ENST00000558752 H3BRM9 83 aa9.41□□□□□ -0.9
RPL28-206ENST00000558752 ATP5LO75964 103 aa9.41□□□□□ -0.9
RPL28-206ENST00000558752 SMIM1B2RUZ4 78 aa9.39□□□□□ -0.91
RPL28-206ENST00000558752 CHCHD1Q96BP2 118 aaKnown RBP9.39□□□□□ -0.91
RPL28-206ENST00000558752 URB1-AS1Q96HZ7 61 aa9.39□□□□□ -0.91
RPL28-206ENST00000558752 A0A096LNJ9 63 aa9.38□□□□□ -0.91
RPL28-206ENST00000558752 PHF5AQ7RTV0 110 aaKnown RBP9.38□□□□□ -0.91
RPL28-206ENST00000558752 COX7B2Q8TF08 81 aa9.38□□□□□ -0.91
RPL28-206ENST00000558752 IGLC3P0DOY3 106 aa9.37□□□□□ -0.91
RPL28-206ENST00000558752 NDUFA6P56556 154 aa9.37□□□□□ -0.91
RPL28-206ENST00000558752 PSORS1C2Q9UIG4 136 aa9.37□□□□□ -0.91
RPL28-206ENST00000558752 LPAP08519 4548 aa9.37□□□□□ -0.91
RPL28-206ENST00000558752 FAM168BA1KXE4 195 aa9.35□□□□□ -0.91
RPL28-206ENST00000558752 C9orf129Q5T035 196 aaKnown RBP9.35□□□□□ -0.91
RPL28-206ENST00000558752 SPINK8P0C7L1 97 aa9.34□□□□□ -0.91
RPL28-206ENST00000558752 LBHQ53QV2 105 aaPredicted RBP9.34□□□□□ -0.91
RPL28-206ENST00000558752 C1orf137Q5JT78 98 aa9.34□□□□□ -0.91
RPL28-206ENST00000558752 FAM19A5Q7Z5A7 132 aaPredicted RBP9.34□□□□□ -0.91
RPL28-206ENST00000558752 BAGE3Q86Y29 109 aa9.34□□□□□ -0.91
RPL28-206ENST00000558752 M0QXV9 152 aa9.33□□□□□ -0.92
RPL28-206ENST00000558752 PMCHL1Q16048 86 aa9.33□□□□□ -0.92
RPL28-206ENST00000558752 SFTA2Q6UW10 78 aa9.33□□□□□ -0.92
RPL28-206ENST00000558752 IGLV5-39A0A0G2JS06 123 aa9.32□□□□□ -0.92
RPL28-206ENST00000558752 UBE2BP63146 152 aa9.32□□□□□ -0.92
RPL28-206ENST00000558752 CBLN2Q8IUK8 224 aa9.32□□□□□ -0.92
RPL28-206ENST00000558752 SLC7A5P1Q8MH63 180 aa9.32□□□□□ -0.92
RPL28-206ENST00000558752 DIRC1Q969H9 104 aa9.32□□□□□ -0.92
RPL28-206ENST00000558752 TRAV12-1A0A0B4J245 112 aa9.31□□□□□ -0.92
RPL28-206ENST00000558752 ZNF22P17026 224 aaPredicted RBP9.31□□□□□ -0.92
RPL28-206ENST00000558752 KRTAP7-1Q8IUC3 87 aa9.31□□□□□ -0.92
RPL28-206ENST00000558752 TP73-AS1Q9UF72 201 aa9.31□□□□□ -0.92
RPL28-206ENST00000558752 IGLV7-43P04211 117 aa9.3□□□□□ -0.92
RPL28-206ENST00000558752 IFI27L1Q96BM0 104 aa9.3□□□□□ -0.92
RPL28-206ENST00000558752 C22orf24Q9Y442 160 aa9.3□□□□□ -0.92
RPL28-206ENST00000558752 HSBP1O75506 76 aa9.29□□□□□ -0.92
RPL28-206ENST00000558752 TRGC2P03986 189 aa9.29□□□□□ -0.92
RPL28-206ENST00000558752 COX17Q14061 63 aa9.29□□□□□ -0.92
RPL28-206ENST00000558752 KRTAP9-2Q9BYQ4 174 aa9.29□□□□□ -0.92
RPL28-206ENST00000558752 XAGE1AQ9HD64 81 aa9.29□□□□□ -0.92
RPL28-206ENST00000558752 CHTOPQ9Y3Y2 248 aaKnown RBP9.29□□□□□ -0.92
RPL28-206ENST00000558752 TMEM170BQ5T4T1 132 aa9.28□□□□□ -0.92
RPL28-206ENST00000558752 C11orf86A6NJI1 115 aa9.27□□□□□ -0.93
RPL28-206ENST00000558752 NUPR1O60356 82 aa9.27□□□□□ -0.93
RPL28-206ENST00000558752 IGLV1-50A0A075B6I6 118 aa9.25□□□□□ -0.93
RPL28-206ENST00000558752 COLCA2A8K830 154 aa9.25□□□□□ -0.93
RPL28-206ENST00000558752 MRPL55Q7Z7F7 128 aaKnown RBP9.25□□□□□ -0.93
RPL28-206ENST00000558752 KRTAP11-1Q8IUC1 163 aa9.25□□□□□ -0.93
RPL28-206ENST00000558752 IGLV5-37A0A075B6J1 123 aa9.24□□□□□ -0.93
RPL28-206ENST00000558752 PRR26Q8N8Z3 221 aa9.24□□□□□ -0.93
RPL28-206ENST00000558752 H0Y9J4 135 aa9.23□□□□□ -0.93
RPL28-206ENST00000558752 LEPROTL1O95214 131 aa9.23□□□□□ -0.93
RPL28-206ENST00000558752 FAM19A2Q8N3H0 131 aa9.23□□□□□ -0.93
RPL28-206ENST00000558752 HSPB8Q9UJY1 196 aa9.23□□□□□ -0.93
RPL28-206ENST00000558752 ERG28Q9UKR5 140 aa9.23□□□□□ -0.93
RPL28-206ENST00000558752 MUC2Q02817 5179 aa9.23□□□□□ -0.93
RPL28-206ENST00000558752 TMEM223A0PJW6 202 aa9.22□□□□□ -0.93
RPL28-206ENST00000558752 PFN2P35080 140 aa9.22□□□□□ -0.93
RPL28-206ENST00000558752 A0A0U1RQV1 116 aa9.21□□□□□ -0.94
RPL28-206ENST00000558752 ZNF861PO60384 105 aa9.21□□□□□ -0.94
RPL28-206ENST00000558752 RPL13AP40429 203 aaKnown RBP9.21□□□□□ -0.94
RPL28-206ENST00000558752 RPL24P83731 157 aaKnown RBP9.21□□□□□ -0.94
RPL28-206ENST00000558752 NKAPP1Q8N9T2 125 aa9.21□□□□□ -0.94
RPL28-206ENST00000558752 LINC00167Q96N53 147 aa9.21□□□□□ -0.94
RPL28-206ENST00000558752 LINC00587B1AMM8 73 aa9.2□□□□□ -0.94
RPL28-206ENST00000558752 SERF1AO75920 110 aa9.2□□□□□ -0.94
RPL28-206ENST00000558752 ZNF625Q96I27 306 aaPredicted RBP9.2□□□□□ -0.94
RPL28-206ENST00000558752 SND1-IT1Q9HBX3 110 aa9.19□□□□□ -0.94
RPL28-206ENST00000558752 BCE1O60756 84 aa9.18□□□□□ -0.94
RPL28-206ENST00000558752 HERV-K104P63124 156 aa9.18□□□□□ -0.94
RPL28-206ENST00000558752 PLNP26678 52 aa9.17□□□□□ -0.94
RPL28-206ENST00000558752 RPL28P46779 137 aaKnown RBP9.17□□□□□ -0.94
RPL28-206ENST00000558752 PRR4Q16378 134 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 244.2 ms