RNA–Protein interactions for RNA: ENST00000558555.5

MEIS3-204, Transcript of Meis homeobox 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MEIS3, Length 1,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-204ENST00000558555 LECT2O14960 151 aa15.75■□□□□ 0.11
MEIS3-204ENST00000558555 SCGB1D4Q6XE38 83 aa15.74■□□□□ 0.11
MEIS3-204ENST00000558555 ZNF625Q96I27 306 aaPredicted RBP15.74■□□□□ 0.11
MEIS3-204ENST00000558555 MIEN1Q9BRT3 115 aa15.74■□□□□ 0.11
MEIS3-204ENST00000558555 EPPK1P58107 5090 aaKnown RBP15.74■□□□□ 0.11
MEIS3-204ENST00000558555 HERV-K104P63124 156 aa15.74■□□□□ 0.11
MEIS3-204ENST00000558555 LINC00526Q96FQ7 95 aa15.74■□□□□ 0.11
MEIS3-204ENST00000558555 TP73-AS1Q9UF72 201 aa15.73■□□□□ 0.11
MEIS3-204ENST00000558555 FRAS1Q86XX4 4008 aa15.73■□□□□ 0.11
MEIS3-204ENST00000558555 C14orf177Q52M58 125 aa15.72■□□□□ 0.11
MEIS3-204ENST00000558555 C2orf82Q6UX34 121 aa15.72■□□□□ 0.11
MEIS3-204ENST00000558555 NTN5Q8WTR8 489 aaPredicted RBP15.72■□□□□ 0.11
MEIS3-204ENST00000558555 C2orf48Q96LS8 159 aa15.72■□□□□ 0.11
MEIS3-204ENST00000558555 F8WDY8 70 aa15.71■□□□□ 0.1
MEIS3-204ENST00000558555 CAMK2N2Q96S95 79 aa15.7■□□□□ 0.1
MEIS3-204ENST00000558555 A0A0J9YXY3 114 aa15.69■□□□□ 0.1
MEIS3-204ENST00000558555 WFDC2Q14508 124 aa15.68■□□□□ 0.1
MEIS3-204ENST00000558555 HNRNPA3P51991 378 aaKnown RBP15.67■□□□□ 0.1
MEIS3-204ENST00000558555 MEIG1Q5JSS6 88 aa15.67■□□□□ 0.1
MEIS3-204ENST00000558555 UNQ6190/PRO20217Q6UXQ8 127 aa15.67■□□□□ 0.1
MEIS3-204ENST00000558555 LRCOL1A6NCL2 159 aa15.66■□□□□ 0.1
MEIS3-204ENST00000558555 LINC00587B1AMM8 73 aa15.65■□□□□ 0.1
MEIS3-204ENST00000558555 CIRBPQ14011 172 aaKnown RBP15.65■□□□□ 0.1
MEIS3-204ENST00000558555 SYCNQ0VAF6 134 aa15.65■□□□□ 0.1
MEIS3-204ENST00000558555 HIGD1BQ9P298 99 aa15.65■□□□□ 0.1
MEIS3-204ENST00000558555 C10orf25Q5T742 122 aa15.64■□□□□ 0.09
MEIS3-204ENST00000558555 C2orf91Q6ZV80 131 aa15.64■□□□□ 0.09
MEIS3-204ENST00000558555 DNAH10Q8IVF4 4471 aa15.64■□□□□ 0.09
MEIS3-204ENST00000558555 TRBV30A0A0K0K1B3 111 aa15.63■□□□□ 0.09
MEIS3-204ENST00000558555 Q6ZRU5 148 aa15.63■□□□□ 0.09
MEIS3-204ENST00000558555 ERG28Q9UKR5 140 aa15.63■□□□□ 0.09
MEIS3-204ENST00000558555 TMEM238C9JI98 176 aa15.62■□□□□ 0.09
MEIS3-204ENST00000558555 TIMM17BO60830 172 aa15.62■□□□□ 0.09
MEIS3-204ENST00000558555 DDTP30046 118 aa15.62■□□□□ 0.09
MEIS3-204ENST00000558555 CARD19Q96LW7 228 aa15.62■□□□□ 0.09
MEIS3-204ENST00000558555 A0A087WTM6 91 aa15.61■□□□□ 0.09
MEIS3-204ENST00000558555 PCP4L1A6NKN8 68 aa15.6■□□□□ 0.09
MEIS3-204ENST00000558555 C6orf48Q9UBA6 75 aa15.6■□□□□ 0.09
MEIS3-204ENST00000558555 SMIM13P0DJ93 91 aa15.6■□□□□ 0.09
MEIS3-204ENST00000558555 PFN2P35080 140 aa15.6■□□□□ 0.09
MEIS3-204ENST00000558555 LINC00158P58513 81 aa15.6■□□□□ 0.09
MEIS3-204ENST00000558555 A0A0U1RRA0 63 aa15.59■□□□□ 0.09
MEIS3-204ENST00000558555 EREGO14944 169 aa15.59■□□□□ 0.09
MEIS3-204ENST00000558555 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.58■□□□□ 0.08
MEIS3-204ENST00000558555 SRSF9Q13242 221 aaKnown RBP eCLIP15.58■□□□□ 0.08
MEIS3-204ENST00000558555 COX17Q14061 63 aa15.58■□□□□ 0.08
MEIS3-204ENST00000558555 C9orf116Q5BN46 136 aaPredicted RBP15.58■□□□□ 0.08
MEIS3-204ENST00000558555 Q8N814 137 aa15.58■□□□□ 0.08
MEIS3-204ENST00000558555 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.57■□□□□ 0.08
MEIS3-204ENST00000558555 RTL8CO15255 209 aa15.57■□□□□ 0.08
MEIS3-204ENST00000558555 SLPIP03973 132 aa15.57■□□□□ 0.08
MEIS3-204ENST00000558555 CNBPP62633 177 aaKnown RBP15.57■□□□□ 0.08
MEIS3-204ENST00000558555 RNF151Q2KHN1 245 aa15.57■□□□□ 0.08
MEIS3-204ENST00000558555 HIST1H4GQ99525 98 aa15.57■□□□□ 0.08
MEIS3-204ENST00000558555 SPANXB1Q9NS25 103 aaPredicted RBP15.57■□□□□ 0.08
MEIS3-204ENST00000558555 LITAFQ99732 161 aa15.56■□□□□ 0.08
MEIS3-204ENST00000558555 ADAMTSL4-AS1Q5T5F5 129 aa15.54■□□□□ 0.08
MEIS3-204ENST00000558555 CTAG1AP78358 180 aa15.54■□□□□ 0.08
MEIS3-204ENST00000558555 TNP2Q05952 138 aa15.54■□□□□ 0.08
MEIS3-204ENST00000558555 Q6ZVH6 145 aa15.54■□□□□ 0.08
MEIS3-204ENST00000558555 SPANXDQ9BXN6 97 aa15.54■□□□□ 0.08
MEIS3-204ENST00000558555 SPANXCQ9NY87 97 aa15.54■□□□□ 0.08
MEIS3-204ENST00000558555 DNAH2Q9P225 4427 aa15.54■□□□□ 0.08
MEIS3-204ENST00000558555 HSD52Q0P140 79 aa15.53■□□□□ 0.08
MEIS3-204ENST00000558555 TAL2Q16559 108 aa15.53■□□□□ 0.08
MEIS3-204ENST00000558555 MIR7-3HGQ8N6C7 128 aa15.52■□□□□ 0.08
MEIS3-204ENST00000558555 DAND5Q8N907 189 aa15.52■□□□□ 0.08
MEIS3-204ENST00000558555 COPS9Q8WXC6 57 aa15.5■□□□□ 0.07
MEIS3-204ENST00000558555 NDUFC2-KCTD14E9PQ53 114 aa15.48■□□□□ 0.07
MEIS3-204ENST00000558555 BIRC6Q9NR09 4857 aa15.48■□□□□ 0.07
MEIS3-204ENST00000558555 IFITM1P13164 125 aa15.48■□□□□ 0.07
MEIS3-204ENST00000558555 GCSHP23434 173 aa15.48■□□□□ 0.07
MEIS3-204ENST00000558555 NPC2P61916 151 aa15.47■□□□□ 0.07
MEIS3-204ENST00000558555 LOC107984640A0A0U1RRK4 108 aa15.46■□□□□ 0.06
MEIS3-204ENST00000558555 TLX1NBP0CAT3 122 aa15.46■□□□□ 0.06
MEIS3-204ENST00000558555 RPL18AQ02543 176 aaKnown RBP15.46■□□□□ 0.06
MEIS3-204ENST00000558555 MUSTN1Q8IVN3 82 aa15.46■□□□□ 0.06
MEIS3-204ENST00000558555 CEND1Q8N111 149 aa15.46■□□□□ 0.06
MEIS3-204ENST00000558555 LINC00308Q8TCZ7 52 aa15.46■□□□□ 0.06
MEIS3-204ENST00000558555 PKIGQ9Y2B9 76 aa15.46■□□□□ 0.06
MEIS3-204ENST00000558555 LINC00336Q6ZUF6 198 aa15.45■□□□□ 0.06
MEIS3-204ENST00000558555 M0R143 59 aa15.44■□□□□ 0.06
MEIS3-204ENST00000558555 C9orf163Q8N9P6 203 aa15.44■□□□□ 0.06
MEIS3-204ENST00000558555 SND1-IT1Q9HBX3 110 aa15.44■□□□□ 0.06
MEIS3-204ENST00000558555 DNAH17Q9UFH2 4485 aa15.44■□□□□ 0.06
MEIS3-204ENST00000558555 PTTG1IPP53801 180 aa15.43■□□□□ 0.06
MEIS3-204ENST00000558555 RPL24P83731 157 aaKnown RBP15.43■□□□□ 0.06
MEIS3-204ENST00000558555 GAGE2EQ4V326 116 aa15.43■□□□□ 0.06
MEIS3-204ENST00000558555 GAGE2DQ9UEU5 116 aa15.43■□□□□ 0.06
MEIS3-204ENST00000558555 HINT1P49773 126 aaPredicted RBP15.42■□□□□ 0.06
MEIS3-204ENST00000558555 Q6ZRP5 223 aa15.42■□□□□ 0.06
MEIS3-204ENST00000558555 IGLV5-52A0A0A0MRZ9 124 aa15.4■□□□□ 0.06
MEIS3-204ENST00000558555 PPDPFQ9H3Y8 114 aa15.4■□□□□ 0.06
MEIS3-204ENST00000558555 HECTD4Q9Y4D8 3996 aa15.4■□□□□ 0.06
MEIS3-204ENST00000558555 FAT2Q9NYQ8 4349 aa15.4■□□□□ 0.06
MEIS3-204ENST00000558555 SOSTDC1Q6X4U4 206 aa15.4■□□□□ 0.06
MEIS3-204ENST00000558555 TMEM238LA0A1B0GVL6 79 aa15.39■□□□□ 0.05
MEIS3-204ENST00000558555 A6NJY4 79 aa15.39■□□□□ 0.05
MEIS3-204ENST00000558555 GAGE2BQ13066 116 aa15.39■□□□□ 0.05
MEIS3-204ENST00000558555 BVES-AS1Q5T3Y7 98 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms