RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 KIAA0087Q14695 138 aa11.26□□□□□ -0.61
TPM1-214ENST00000558544 TOMM7Q9P0U1 55 aa11.26□□□□□ -0.61
TPM1-214ENST00000558544 RYR1P21817 5038 aa11.25□□□□□ -0.61
TPM1-214ENST00000558544 KIAA1109Q2LD37 5005 aa11.25□□□□□ -0.61
TPM1-214ENST00000558544 H3BRM9 83 aa11.25□□□□□ -0.61
TPM1-214ENST00000558544 Q6ZRU5 148 aa11.25□□□□□ -0.61
TPM1-214ENST00000558544 NDUFA1O15239 70 aa11.23□□□□□ -0.61
TPM1-214ENST00000558544 PRSS2P07478 247 aa11.23□□□□□ -0.61
TPM1-214ENST00000558544 MAJINQ3KP22 176 aa11.23□□□□□ -0.61
TPM1-214ENST00000558544 TMEM170BQ5T4T1 132 aa11.23□□□□□ -0.61
TPM1-214ENST00000558544 FAM30AQ9NZY2 134 aa11.23□□□□□ -0.61
TPM1-214ENST00000558544 Q8IZM0 81 aa11.22□□□□□ -0.61
TPM1-214ENST00000558544 HSPG2P98160 4391 aa11.21□□□□□ -0.61
TPM1-214ENST00000558544 S100A12P80511 92 aa11.21□□□□□ -0.61
TPM1-214ENST00000558544 C10orf25Q5T742 122 aa11.21□□□□□ -0.61
TPM1-214ENST00000558544 C2orf82Q6UX34 121 aa11.21□□□□□ -0.61
TPM1-214ENST00000558544 SDIM1Q6ZPB5 146 aa11.21□□□□□ -0.61
TPM1-214ENST00000558544 VAMP8Q9BV40 100 aa11.21□□□□□ -0.61
TPM1-214ENST00000558544 F8WDY8 70 aa11.2□□□□□ -0.62
TPM1-214ENST00000558544 HAMPP81172 84 aa11.2□□□□□ -0.62
TPM1-214ENST00000558544 C6orf226Q5I0X4 101 aa11.2□□□□□ -0.62
TPM1-214ENST00000558544 UNQ6190/PRO20217Q6UXQ8 127 aa11.2□□□□□ -0.62
TPM1-214ENST00000558544 COX7B2Q8TF08 81 aa11.2□□□□□ -0.62
TPM1-214ENST00000558544 PAM16Q9Y3D7 125 aa11.2□□□□□ -0.62
TPM1-214ENST00000558544 CDK2AP2O75956 126 aa11.19□□□□□ -0.62
TPM1-214ENST00000558544 DPM2O94777 84 aa11.19□□□□□ -0.62
TPM1-214ENST00000558544 Q6ZSA8 131 aa11.19□□□□□ -0.62
TPM1-214ENST00000558544 IGKCP01834 107 aa11.18□□□□□ -0.62
TPM1-214ENST00000558544 CKS1BP61024 79 aa11.18□□□□□ -0.62
TPM1-214ENST00000558544 C6orf48Q9UBA6 75 aa11.18□□□□□ -0.62
TPM1-214ENST00000558544 IGLV5-39A0A0G2JS06 123 aa11.17□□□□□ -0.62
TPM1-214ENST00000558544 CHTF8P0CG12 524 aa11.17□□□□□ -0.62
TPM1-214ENST00000558544 XGP55808 180 aa11.17□□□□□ -0.62
TPM1-214ENST00000558544 SPATA45Q537H7 98 aa11.17□□□□□ -0.62
TPM1-214ENST00000558544 PRO1933Q9H354 126 aa11.17□□□□□ -0.62
TPM1-214ENST00000558544 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.17□□□□□ -0.62
TPM1-214ENST00000558544 TMEM223A0PJW6 202 aa11.16□□□□□ -0.62
TPM1-214ENST00000558544 PANO1I0J062 215 aa11.16□□□□□ -0.62
TPM1-214ENST00000558544 PLNP26678 52 aa11.16□□□□□ -0.62
TPM1-214ENST00000558544 A0A096LNI7 61 aa11.16□□□□□ -0.62
TPM1-214ENST00000558544 IGKV2-24A0A0C4DH68 120 aa11.16□□□□□ -0.62
TPM1-214ENST00000558544 CXCL5P42830 114 aa11.16□□□□□ -0.62
TPM1-214ENST00000558544 RNF151Q2KHN1 245 aa11.16□□□□□ -0.62
TPM1-214ENST00000558544 TRBV30A0A0K0K1B3 111 aa11.15□□□□□ -0.63
TPM1-214ENST00000558544 LOC107984640A0A0U1RRK4 108 aa11.15□□□□□ -0.63
TPM1-214ENST00000558544 ANKRD39Q53RE8 183 aa11.15□□□□□ -0.63
TPM1-214ENST00000558544 STPG4Q8N801 248 aa11.15□□□□□ -0.63
TPM1-214ENST00000558544 PKIGQ9Y2B9 76 aa11.15□□□□□ -0.63
TPM1-214ENST00000558544 HERC2O95714 4834 aa11.14□□□□□ -0.63
TPM1-214ENST00000558544 RPL18AQ02543 176 aaKnown RBP11.14□□□□□ -0.63
TPM1-214ENST00000558544 C9orf116Q5BN46 136 aaPredicted RBP11.14□□□□□ -0.63
TPM1-214ENST00000558544 SCXQ7RTU7 201 aa11.14□□□□□ -0.63
TPM1-214ENST00000558544 GAGE2BQ13066 116 aa11.13□□□□□ -0.63
TPM1-214ENST00000558544 HSBP1L1C9JCN9 74 aa11.12□□□□□ -0.63
TPM1-214ENST00000558544 CIRBPQ14011 172 aaKnown RBP11.12□□□□□ -0.63
TPM1-214ENST00000558544 SPACA4Q8TDM5 124 aa11.12□□□□□ -0.63
TPM1-214ENST00000558544 PTTG1IPP53801 180 aa11.11□□□□□ -0.63
TPM1-214ENST00000558544 CIRBP-AS1Q8TBR5 109 aa11.11□□□□□ -0.63
TPM1-214ENST00000558544 TLX1NBP0CAT3 122 aa11.1□□□□□ -0.63
TPM1-214ENST00000558544 DPH3Q96FX2 82 aa11.1□□□□□ -0.63
TPM1-214ENST00000558544 Q6ZRP5 223 aa11.09□□□□□ -0.63
TPM1-214ENST00000558544 IGKV2D-26A0A0A0MRZ7 120 aa11.08□□□□□ -0.64
TPM1-214ENST00000558544 PCP4L1A6NKN8 68 aa11.08□□□□□ -0.64
TPM1-214ENST00000558544 TSTD3H0UI37 97 aa11.08□□□□□ -0.64
TPM1-214ENST00000558544 HERVK_113P61574 105 aa11.08□□□□□ -0.64
TPM1-214ENST00000558544 LINC00474Q9P2X8 69 aa11.08□□□□□ -0.64
TPM1-214ENST00000558544 A0A087WYN8 130 aa11.07□□□□□ -0.64
TPM1-214ENST00000558544 NDUFC2-KCTD14E9PQ53 114 aa11.07□□□□□ -0.64
TPM1-214ENST00000558544 GAGE2EQ4V326 116 aa11.07□□□□□ -0.64
TPM1-214ENST00000558544 C14orf144Q96I85 54 aa11.07□□□□□ -0.64
TPM1-214ENST00000558544 GAGE2DQ9UEU5 116 aa11.07□□□□□ -0.64
TPM1-214ENST00000558544 TP73-AS1Q9UF72 201 aa11.07□□□□□ -0.64
TPM1-214ENST00000558544 FAT1Q14517 4588 aa11.07□□□□□ -0.64
TPM1-214ENST00000558544 LEPROTO15243 131 aa11.06□□□□□ -0.64
TPM1-214ENST00000558544 SMR3BP02814 79 aaPredicted RBP11.06□□□□□ -0.64
TPM1-214ENST00000558544 TSPEAR-AS2P59090 65 aa11.05□□□□□ -0.64
TPM1-214ENST00000558544 ZNF625Q96I27 306 aaPredicted RBP11.05□□□□□ -0.64
TPM1-214ENST00000558544 COX8AP10176 69 aa11.04□□□□□ -0.64
TPM1-214ENST00000558544 PLEKHB2Q96CS7 222 aa11.04□□□□□ -0.64
TPM1-214ENST00000558544 E9PLD3 99 aa11.03□□□□□ -0.64
TPM1-214ENST00000558544 NMUP48645 174 aa11.03□□□□□ -0.64
TPM1-214ENST00000558544 SFTA2Q6UW10 78 aa11.03□□□□□ -0.64
TPM1-214ENST00000558544 PCP2Q8IVA1 136 aa11.03□□□□□ -0.64
TPM1-214ENST00000558544 MIEN1Q9BRT3 115 aa11.03□□□□□ -0.64
TPM1-214ENST00000558544 KRTAP17-1Q9BYP8 105 aa11.03□□□□□ -0.64
TPM1-214ENST00000558544 PLAC8Q9NZF1 115 aa11.03□□□□□ -0.64
TPM1-214ENST00000558544 UQCR10Q9UDW1 63 aa11.03□□□□□ -0.64
TPM1-214ENST00000558544 J3QQQ9 107 aa11.03□□□□□ -0.64
TPM1-214ENST00000558544 DDTP30046 118 aa11.03□□□□□ -0.64
TPM1-214ENST00000558544 NDUFA12Q9UI09 145 aa11.03□□□□□ -0.64
TPM1-214ENST00000558544 ERG28Q9UKR5 140 aa11.03□□□□□ -0.64
TPM1-214ENST00000558544 PFN2P35080 140 aa11.02□□□□□ -0.65
TPM1-214ENST00000558544 TTTY13Q9BZ97 58 aa11.02□□□□□ -0.65
TPM1-214ENST00000558544 A0A1W2PNN7 141 aa11.01□□□□□ -0.65
TPM1-214ENST00000558544 LGALS3P17931 250 aaKnown RBP11.01□□□□□ -0.65
TPM1-214ENST00000558544 C9orf129Q5T035 196 aaKnown RBP11.01□□□□□ -0.65
TPM1-214ENST00000558544 SLC25A34Q6PIV7 304 aa11.01□□□□□ -0.65
TPM1-214ENST00000558544 XAGE1AQ9HD64 81 aa11.01□□□□□ -0.65
TPM1-214ENST00000558544 FAM168BA1KXE4 195 aa11□□□□□ -0.65
TPM1-214ENST00000558544 BOD1L2Q8IYS8 172 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms