RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 LINC00310P59036 64 aa7.84□□□□□ -1.15
SMAD3-205ENST00000558428 C6orf226Q5I0X4 101 aa7.84□□□□□ -1.15
SMAD3-205ENST00000558428 IFI27L1Q96BM0 104 aa7.84□□□□□ -1.15
SMAD3-205ENST00000558428 H3BRM9 83 aa7.83□□□□□ -1.16
SMAD3-205ENST00000558428 PLA2G1BP04054 148 aaKnown RBP7.83□□□□□ -1.16
SMAD3-205ENST00000558428 SPINK8P0C7L1 97 aa7.83□□□□□ -1.16
SMAD3-205ENST00000558428 CKS1BP61024 79 aa7.83□□□□□ -1.16
SMAD3-205ENST00000558428 STPG4Q8N801 248 aa7.83□□□□□ -1.16
SMAD3-205ENST00000558428 PLAC8Q9NZF1 115 aa7.83□□□□□ -1.16
SMAD3-205ENST00000558428 TRBV30A0A0K0K1B3 111 aa7.82□□□□□ -1.16
SMAD3-205ENST00000558428 S100A1P23297 94 aa7.82□□□□□ -1.16
SMAD3-205ENST00000558428 CHTOPQ9Y3Y2 248 aaKnown RBP7.82□□□□□ -1.16
SMAD3-205ENST00000558428 SRRM2Q9UQ35 2752 aaKnown RBP7.81□□□□□ -1.16
SMAD3-205ENST00000558428 TRAV12-1A0A0B4J245 112 aa7.81□□□□□ -1.16
SMAD3-205ENST00000558428 C11orf86A6NJI1 115 aa7.81□□□□□ -1.16
SMAD3-205ENST00000558428 NUPR1O60356 82 aa7.81□□□□□ -1.16
SMAD3-205ENST00000558428 HIST1H2BKO60814 126 aa7.81□□□□□ -1.16
SMAD3-205ENST00000558428 ATP6V1G1O75348 118 aa7.81□□□□□ -1.16
SMAD3-205ENST00000558428 LEPROTL1O95214 131 aa7.81□□□□□ -1.16
SMAD3-205ENST00000558428 HIST1H2BJP06899 126 aa7.81□□□□□ -1.16
SMAD3-205ENST00000558428 ZNF22P17026 224 aaPredicted RBP7.81□□□□□ -1.16
SMAD3-205ENST00000558428 HIST1H2BOP23527 126 aa7.81□□□□□ -1.16
SMAD3-205ENST00000558428 HIST1H2BBP33778 126 aa7.81□□□□□ -1.16
SMAD3-205ENST00000558428 HIST1H2BDP58876 126 aa7.81□□□□□ -1.16
SMAD3-205ENST00000558428 HIST1H2BCP62807 126 aa7.81□□□□□ -1.16
SMAD3-205ENST00000558428 HIST2H2BEQ16778 126 aa7.81□□□□□ -1.16
SMAD3-205ENST00000558428 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.81□□□□□ -1.16
SMAD3-205ENST00000558428 COX7B2Q8TF08 81 aa7.81□□□□□ -1.16
SMAD3-205ENST00000558428 HIST1H2BHQ93079 126 aa7.81□□□□□ -1.16
SMAD3-205ENST00000558428 HIST1H2BNQ99877 126 aa7.81□□□□□ -1.16
SMAD3-205ENST00000558428 HIST1H2BMQ99879 126 aa7.81□□□□□ -1.16
SMAD3-205ENST00000558428 TLX1NBP0CAT3 122 aa7.8□□□□□ -1.16
SMAD3-205ENST00000558428 CXCL5P42830 114 aa7.8□□□□□ -1.16
SMAD3-205ENST00000558428 C9orf116Q5BN46 136 aaPredicted RBP7.8□□□□□ -1.16
SMAD3-205ENST00000558428 Q6ZRP5 223 aa7.8□□□□□ -1.16
SMAD3-205ENST00000558428 F8VRH5 84 aa7.79□□□□□ -1.16
SMAD3-205ENST00000558428 H0Y8G0 127 aa7.79□□□□□ -1.16
SMAD3-205ENST00000558428 INAFM2P0DMQ5 153 aa7.79□□□□□ -1.16
SMAD3-205ENST00000558428 FABP4P15090 132 aa7.79□□□□□ -1.16
SMAD3-205ENST00000558428 RPL37AP61513 92 aaKnown RBP7.79□□□□□ -1.16
SMAD3-205ENST00000558428 GAGE2EQ4V326 116 aa7.79□□□□□ -1.16
SMAD3-205ENST00000558428 TMEM170BQ5T4T1 132 aa7.79□□□□□ -1.16
SMAD3-205ENST00000558428 GAGE2DQ9UEU5 116 aa7.79□□□□□ -1.16
SMAD3-205ENST00000558428 HSPB8Q9UJY1 196 aa7.79□□□□□ -1.16
SMAD3-205ENST00000558428 FLG2Q5D862 2391 aaPredicted RBP7.78□□□□□ -1.16
SMAD3-205ENST00000558428 IGLV5-39A0A0G2JS06 123 aa7.77□□□□□ -1.17
SMAD3-205ENST00000558428 NDUFC2-KCTD14E9PQ53 114 aa7.77□□□□□ -1.17
SMAD3-205ENST00000558428 C7orf33Q8WU49 177 aa7.77□□□□□ -1.17
SMAD3-205ENST00000558428 PKHD1L1Q86WI1 4243 aa7.76□□□□□ -1.17
SMAD3-205ENST00000558428 A0A1W2PNN7 141 aa7.76□□□□□ -1.17
SMAD3-205ENST00000558428 KRTAP10-4P60372 401 aaPredicted RBP7.76□□□□□ -1.17
SMAD3-205ENST00000558428 MYCBP2O75592 4640 aa7.75□□□□□ -1.17
SMAD3-205ENST00000558428 ODF1Q14990 250 aa7.75□□□□□ -1.17
SMAD3-205ENST00000558428 TMEM223A0PJW6 202 aa7.74□□□□□ -1.17
SMAD3-205ENST00000558428 FAM168BA1KXE4 195 aa7.73□□□□□ -1.17
SMAD3-205ENST00000558428 FAM19A5Q7Z5A7 132 aaPredicted RBP7.73□□□□□ -1.17
SMAD3-205ENST00000558428 MAP1LC3CQ9BXW4 147 aa7.73□□□□□ -1.17
SMAD3-205ENST00000558428 C9orf129Q5T035 196 aaKnown RBP7.72□□□□□ -1.17
SMAD3-205ENST00000558428 PHF5AQ7RTV0 110 aaKnown RBP7.72□□□□□ -1.17
SMAD3-205ENST00000558428 PLNP26678 52 aa7.71□□□□□ -1.18
SMAD3-205ENST00000558428 COA6Q5JTJ3 125 aaKnown RBP7.71□□□□□ -1.18
SMAD3-205ENST00000558428 PMCHL2Q9BQD1 86 aa7.71□□□□□ -1.18
SMAD3-205ENST00000558428 XAGE1AQ9HD64 81 aa7.71□□□□□ -1.18
SMAD3-205ENST00000558428 DPM2O94777 84 aa7.7□□□□□ -1.18
SMAD3-205ENST00000558428 SFTA2Q6UW10 78 aa7.7□□□□□ -1.18
SMAD3-205ENST00000558428 ZNF625Q96I27 306 aaPredicted RBP7.7□□□□□ -1.18
SMAD3-205ENST00000558428 M0QXV9 152 aa7.69□□□□□ -1.18
SMAD3-205ENST00000558428 IGKCP01834 107 aa7.69□□□□□ -1.18
SMAD3-205ENST00000558428 PFN2P35080 140 aa7.69□□□□□ -1.18
SMAD3-205ENST00000558428 HNRNPA3P51991 378 aaKnown RBP7.69□□□□□ -1.18
SMAD3-205ENST00000558428 PRR3P79522 188 aaKnown RBP7.69□□□□□ -1.18
SMAD3-205ENST00000558428 KRTAP7-1Q8IUC3 87 aa7.69□□□□□ -1.18
SMAD3-205ENST00000558428 FAT3Q8TDW7 4589 aa7.69□□□□□ -1.18
SMAD3-205ENST00000558428 SYS1-DBNDD2H3BUS1 97 aa7.68□□□□□ -1.18
SMAD3-205ENST00000558428 ERG28Q9UKR5 140 aa7.68□□□□□ -1.18
SMAD3-205ENST00000558428 LRP1Q07954 4544 aaKnown RBP7.67□□□□□ -1.18
SMAD3-205ENST00000558428 HERVK_113P61574 105 aa7.67□□□□□ -1.18
SMAD3-205ENST00000558428 SERTAD4-AS1Q5TG53 156 aa7.67□□□□□ -1.18
SMAD3-205ENST00000558428 UBE2BP63146 152 aa7.66□□□□□ -1.18
SMAD3-205ENST00000558428 COX17Q14061 63 aa7.66□□□□□ -1.18
SMAD3-205ENST00000558428 PSORS1C2Q9UIG4 136 aa7.66□□□□□ -1.18
SMAD3-205ENST00000558428 LEPROTO15243 131 aa7.65□□□□□ -1.18
SMAD3-205ENST00000558428 PET117Q6UWS5 81 aa7.65□□□□□ -1.18
SMAD3-205ENST00000558428 PLEKHB2Q96CS7 222 aa7.65□□□□□ -1.18
SMAD3-205ENST00000558428 NDUFA12Q9UI09 145 aa7.65□□□□□ -1.18
SMAD3-205ENST00000558428 C22orf24Q9Y442 160 aa7.65□□□□□ -1.18
SMAD3-205ENST00000558428 C3orf79P0CE67 100 aa7.64□□□□□ -1.19
SMAD3-205ENST00000558428 LINC00158P58513 81 aa7.64□□□□□ -1.19
SMAD3-205ENST00000558428 TSPEAR-AS2P59090 65 aa7.64□□□□□ -1.19
SMAD3-205ENST00000558428 KRTDAPP60985 99 aa7.64□□□□□ -1.19
SMAD3-205ENST00000558428 LINC01545Q5VT33 79 aa7.64□□□□□ -1.19
SMAD3-205ENST00000558428 A0A0U1RRA0 63 aa7.63□□□□□ -1.19
SMAD3-205ENST00000558428 MYMXA0A1B0GTQ4 84 aa7.63□□□□□ -1.19
SMAD3-205ENST00000558428 J3QQQ9 107 aa7.63□□□□□ -1.19
SMAD3-205ENST00000558428 HERV-K104P63124 156 aa7.63□□□□□ -1.19
SMAD3-205ENST00000558428 LBHQ53QV2 105 aaPredicted RBP7.63□□□□□ -1.19
SMAD3-205ENST00000558428 MEIG1Q5JSS6 88 aa7.63□□□□□ -1.19
SMAD3-205ENST00000558428 C1orf137Q5JT78 98 aa7.63□□□□□ -1.19
SMAD3-205ENST00000558428 KRTAP11-1Q8IUC1 163 aa7.63□□□□□ -1.19
SMAD3-205ENST00000558428 SND1-IT1Q9HBX3 110 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms