RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 C6orf226Q5I0X4 101 aa7.3□□□□□ -1.24
HERC1-202ENST00000558324 KRTAP7-1Q8IUC3 87 aa7.3□□□□□ -1.24
HERC1-202ENST00000558324 SCGB3A1Q96QR1 104 aa7.3□□□□□ -1.24
HERC1-202ENST00000558324 ALKBH7Q9BT30 221 aaPredicted RBP7.3□□□□□ -1.24
HERC1-202ENST00000558324 IGLV7-43P04211 117 aa7.29□□□□□ -1.24
HERC1-202ENST00000558324 SEC11AP67812 179 aa7.29□□□□□ -1.24
HERC1-202ENST00000558324 C9orf129Q5T035 196 aaKnown RBP7.29□□□□□ -1.24
HERC1-202ENST00000558324 FAM19A3Q7Z5A8 133 aa7.29□□□□□ -1.24
HERC1-202ENST00000558324 Q8IZM0 81 aa7.29□□□□□ -1.24
HERC1-202ENST00000558324 LINC00469Q8N7U9 141 aa7.29□□□□□ -1.24
HERC1-202ENST00000558324 GNB1LQ9BYB4 327 aa7.29□□□□□ -1.24
HERC1-202ENST00000558324 KRTAP10-8P60410 259 aa7.28□□□□□ -1.24
HERC1-202ENST00000558324 ERASQ7Z444 233 aa7.28□□□□□ -1.24
HERC1-202ENST00000558324 MRPL18Q9H0U6 180 aaKnown RBP7.28□□□□□ -1.24
HERC1-202ENST00000558324 RPS10P5Q9NQ39 176 aa7.28□□□□□ -1.24
HERC1-202ENST00000558324 FABP9Q0Z7S8 132 aa7.27□□□□□ -1.25
HERC1-202ENST00000558324 FA2HQ7L5A8 372 aa7.27□□□□□ -1.25
HERC1-202ENST00000558324 XAGE1AQ9HD64 81 aa7.27□□□□□ -1.25
HERC1-202ENST00000558324 SMCO4Q9NRQ5 59 aa7.27□□□□□ -1.25
HERC1-202ENST00000558324 SLC7A5P1Q8MH63 180 aa7.26□□□□□ -1.25
HERC1-202ENST00000558324 DIRC1Q969H9 104 aa7.26□□□□□ -1.25
HERC1-202ENST00000558324 SMIM1B2RUZ4 78 aa7.25□□□□□ -1.25
HERC1-202ENST00000558324 F8VRH5 84 aa7.25□□□□□ -1.25
HERC1-202ENST00000558324 RHEBQ15382 184 aa7.25□□□□□ -1.25
HERC1-202ENST00000558324 COX19Q49B96 90 aa7.25□□□□□ -1.25
HERC1-202ENST00000558324 TINCRA0A1B0GVN0 87 aa7.24□□□□□ -1.25
HERC1-202ENST00000558324 LINC01546A6NGU7 62 aa7.24□□□□□ -1.25
HERC1-202ENST00000558324 SPINK8P0C7L1 97 aa7.24□□□□□ -1.25
HERC1-202ENST00000558324 C10orf91Q5T1B1 145 aa7.24□□□□□ -1.25
HERC1-202ENST00000558324 CST9LQ9H4G1 147 aa7.24□□□□□ -1.25
HERC1-202ENST00000558324 CARHSP1Q9Y2V2 147 aaKnown RBP7.24□□□□□ -1.25
HERC1-202ENST00000558324 H0Y9J4 135 aa7.23□□□□□ -1.25
HERC1-202ENST00000558324 CXCL5P42830 114 aa7.23□□□□□ -1.25
HERC1-202ENST00000558324 PMVKQ15126 192 aa7.23□□□□□ -1.25
HERC1-202ENST00000558324 PDZD11Q5EBL8 140 aa7.23□□□□□ -1.25
HERC1-202ENST00000558324 PRR26Q8N8Z3 221 aa7.23□□□□□ -1.25
HERC1-202ENST00000558324 COX7B2Q8TF08 81 aa7.23□□□□□ -1.25
HERC1-202ENST00000558324 IGLV5-45A0A087WSX0 123 aa7.22□□□□□ -1.25
HERC1-202ENST00000558324 LINC01549A6NIU2 74 aa7.22□□□□□ -1.25
HERC1-202ENST00000558324 C22orf24Q9Y442 160 aa7.22□□□□□ -1.25
HERC1-202ENST00000558324 NDUFA6P56556 154 aa7.21□□□□□ -1.26
HERC1-202ENST00000558324 TRAPPC1Q9Y5R8 145 aa7.21□□□□□ -1.26
HERC1-202ENST00000558324 A0A096LNJ9 63 aa7.2□□□□□ -1.26
HERC1-202ENST00000558324 APOC3P02656 99 aa7.2□□□□□ -1.26
HERC1-202ENST00000558324 RAB5BP61020 215 aa7.2□□□□□ -1.26
HERC1-202ENST00000558324 PMCHL1Q16048 86 aa7.2□□□□□ -1.26
HERC1-202ENST00000558324 C18orf32Q8TCD1 76 aa7.2□□□□□ -1.26
HERC1-202ENST00000558324 H3BRM9 83 aa7.19□□□□□ -1.26
HERC1-202ENST00000558324 LBHQ53QV2 105 aaPredicted RBP7.19□□□□□ -1.26
HERC1-202ENST00000558324 URB1-AS1Q96HZ7 61 aa7.19□□□□□ -1.26
HERC1-202ENST00000558324 LRP2P98164 4655 aa7.19□□□□□ -1.26
HERC1-202ENST00000558324 GAGE10A6NGK3 116 aa7.18□□□□□ -1.26
HERC1-202ENST00000558324 HBDP02042 147 aa7.18□□□□□ -1.26
HERC1-202ENST00000558324 KRTAP1-4P0C5Y4 121 aa7.18□□□□□ -1.26
HERC1-202ENST00000558324 MRPL55Q7Z7F7 128 aaKnown RBP7.18□□□□□ -1.26
HERC1-202ENST00000558324 RPL37AP8A6NKH3 93 aa7.17□□□□□ -1.26
HERC1-202ENST00000558324 ATP5LO75964 103 aa7.17□□□□□ -1.26
HERC1-202ENST00000558324 LINC00614P0C842 121 aa7.17□□□□□ -1.26
HERC1-202ENST00000558324 IGLC3P0DOY3 106 aa7.17□□□□□ -1.26
HERC1-202ENST00000558324 NUPR1O60356 82 aa7.16□□□□□ -1.26
HERC1-202ENST00000558324 ZNF861PO60384 105 aa7.16□□□□□ -1.26
HERC1-202ENST00000558324 SNAPINO95295 136 aa7.16□□□□□ -1.26
HERC1-202ENST00000558324 ZNF22P17026 224 aaPredicted RBP7.16□□□□□ -1.26
HERC1-202ENST00000558324 PFN2P35080 140 aa7.16□□□□□ -1.26
HERC1-202ENST00000558324 SVBPQ8N300 66 aa7.16□□□□□ -1.26
HERC1-202ENST00000558324 TP73-AS1Q9UF72 201 aa7.16□□□□□ -1.26
HERC1-202ENST00000558324 IGLV1-50A0A075B6I6 118 aa7.15□□□□□ -1.26
HERC1-202ENST00000558324 LINC00167Q96N53 147 aa7.15□□□□□ -1.26
HERC1-202ENST00000558324 IGLV5-39A0A0G2JS06 123 aa7.14□□□□□ -1.27
HERC1-202ENST00000558324 BCE1O60756 84 aa7.14□□□□□ -1.27
HERC1-202ENST00000558324 SCO1O75880 301 aa7.14□□□□□ -1.27
HERC1-202ENST00000558324 BAGE3Q86Y29 109 aa7.14□□□□□ -1.27
HERC1-202ENST00000558324 NKAPP1Q8N9T2 125 aa7.14□□□□□ -1.27
HERC1-202ENST00000558324 C11orf86A6NJI1 115 aa7.13□□□□□ -1.27
HERC1-202ENST00000558324 RPL28P46779 137 aaKnown RBP7.13□□□□□ -1.27
HERC1-202ENST00000558324 TMEM170BQ5T4T1 132 aa7.13□□□□□ -1.27
HERC1-202ENST00000558324 ZNF625Q96I27 306 aaPredicted RBP7.13□□□□□ -1.27
HERC1-202ENST00000558324 RPL13AP40429 203 aaKnown RBP7.12□□□□□ -1.27
HERC1-202ENST00000558324 ERG28Q9UKR5 140 aa7.12□□□□□ -1.27
HERC1-202ENST00000558324 IGKV2-28A0A075B6P5 120 aa7.11□□□□□ -1.27
HERC1-202ENST00000558324 IGKV2D-28P01615 120 aa7.11□□□□□ -1.27
HERC1-202ENST00000558324 SND1-IT1Q9HBX3 110 aa7.11□□□□□ -1.27
HERC1-202ENST00000558324 CHTOPQ9Y3Y2 248 aaKnown RBP7.11□□□□□ -1.27
HERC1-202ENST00000558324 IGLV5-37A0A075B6J1 123 aa7.1□□□□□ -1.27
HERC1-202ENST00000558324 UBE2AP49459 152 aa7.1□□□□□ -1.27
HERC1-202ENST00000558324 LPAP08519 4548 aa7.09□□□□□ -1.27
HERC1-202ENST00000558324 YPEL4Q96NS1 127 aa7.09□□□□□ -1.27
HERC1-202ENST00000558324 A0A087X002 238 aa7.08□□□□□ -1.28
HERC1-202ENST00000558324 CBLN2Q8IUK8 224 aa7.08□□□□□ -1.28
HERC1-202ENST00000558324 IFI27L1Q96BM0 104 aa7.08□□□□□ -1.28
HERC1-202ENST00000558324 CHCHD1Q96BP2 118 aaKnown RBP7.08□□□□□ -1.28
HERC1-202ENST00000558324 A0A0U1RRA0 63 aa7.07□□□□□ -1.28
HERC1-202ENST00000558324 VPREB1P12018 145 aa7.07□□□□□ -1.28
HERC1-202ENST00000558324 PRLHP81277 87 aa7.07□□□□□ -1.28
HERC1-202ENST00000558324 COX17Q14061 63 aa7.07□□□□□ -1.28
HERC1-202ENST00000558324 ANAPC11Q9NYG5 84 aa7.07□□□□□ -1.28
HERC1-202ENST00000558324 RNF213Q63HN8 5207 aa7.06□□□□□ -1.28
HERC1-202ENST00000558324 TMEM238C9JI98 176 aa7.06□□□□□ -1.28
HERC1-202ENST00000558324 HSBP1O75506 76 aa7.06□□□□□ -1.28
HERC1-202ENST00000558324 TSPAN13O95857 204 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms