RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 ZNF815PA8K554 130 aa8.18□□□□□ -1.1
TPM1-209ENST00000558072 KIAA0087Q14695 138 aa8.18□□□□□ -1.1
TPM1-209ENST00000558072 SLC25A34Q6PIV7 304 aa8.18□□□□□ -1.1
TPM1-209ENST00000558072 LINC00518Q8N0U6 118 aa8.18□□□□□ -1.1
TPM1-209ENST00000558072 MAPKAPK5-AS1Q8N8E1 139 aa8.18□□□□□ -1.1
TPM1-209ENST00000558072 DNAH10Q8IVF4 4471 aa8.18□□□□□ -1.1
TPM1-209ENST00000558072 LRCOL1A6NCL2 159 aa8.17□□□□□ -1.1
TPM1-209ENST00000558072 TSTD3H0UI37 97 aa8.17□□□□□ -1.1
TPM1-209ENST00000558072 SYCNQ0VAF6 134 aa8.17□□□□□ -1.1
TPM1-209ENST00000558072 COX17Q14061 63 aa8.17□□□□□ -1.1
TPM1-209ENST00000558072 MAJINQ3KP22 176 aa8.17□□□□□ -1.1
TPM1-209ENST00000558072 HIGD2BQ4VC39 106 aa8.17□□□□□ -1.1
TPM1-209ENST00000558072 SCGB1D4Q6XE38 83 aa8.17□□□□□ -1.1
TPM1-209ENST00000558072 COPS9Q8WXC6 57 aa8.17□□□□□ -1.1
TPM1-209ENST00000558072 A0A087WTM6 91 aa8.16□□□□□ -1.1
TPM1-209ENST00000558072 IGKV2D-26A0A0A0MRZ7 120 aa8.16□□□□□ -1.1
TPM1-209ENST00000558072 CNBPP62633 177 aaKnown RBP8.16□□□□□ -1.1
TPM1-209ENST00000558072 BOD1L2Q8IYS8 172 aa8.16□□□□□ -1.1
TPM1-209ENST00000558072 ZNF625Q96I27 306 aaPredicted RBP8.16□□□□□ -1.1
TPM1-209ENST00000558072 UQCR10Q9UDW1 63 aa8.16□□□□□ -1.1
TPM1-209ENST00000558072 DNAH2Q9P225 4427 aa8.16□□□□□ -1.1
TPM1-209ENST00000558072 RTL8CO15255 209 aa8.15□□□□□ -1.1
TPM1-209ENST00000558072 TIMM17BO60830 172 aa8.15□□□□□ -1.1
TPM1-209ENST00000558072 Q6ZVH6 145 aa8.15□□□□□ -1.1
TPM1-209ENST00000558072 Q8N814 137 aa8.15□□□□□ -1.1
TPM1-209ENST00000558072 CARD19Q96LW7 228 aa8.15□□□□□ -1.1
TPM1-209ENST00000558072 FRAS1Q86XX4 4008 aa8.14□□□□□ -1.11
TPM1-209ENST00000558072 TMEM238C9JI98 176 aa8.14□□□□□ -1.11
TPM1-209ENST00000558072 WFDC2Q14508 124 aa8.14□□□□□ -1.11
TPM1-209ENST00000558072 MEIG1Q5JSS6 88 aa8.14□□□□□ -1.11
TPM1-209ENST00000558072 LECT2O14960 151 aa8.13□□□□□ -1.11
TPM1-209ENST00000558072 FUSP35637 526 aaKnown RBP eCLIP8.13□□□□□ -1.11
TPM1-209ENST00000558072 TSPEAR-AS2P59090 65 aa8.13□□□□□ -1.11
TPM1-209ENST00000558072 PCP2Q8IVA1 136 aa8.13□□□□□ -1.11
TPM1-209ENST00000558072 C14orf144Q96I85 54 aa8.13□□□□□ -1.11
TPM1-209ENST00000558072 PGPEP1Q9NXJ5 209 aa8.13□□□□□ -1.11
TPM1-209ENST00000558072 A0A0J9YXY3 114 aa8.12□□□□□ -1.11
TPM1-209ENST00000558072 CDPF1Q6NVV7 123 aa8.12□□□□□ -1.11
TPM1-209ENST00000558072 MIEN1Q9BRT3 115 aa8.12□□□□□ -1.11
TPM1-209ENST00000558072 HIGD1BQ9P298 99 aa8.12□□□□□ -1.11
TPM1-209ENST00000558072 ERG28Q9UKR5 140 aa8.12□□□□□ -1.11
TPM1-209ENST00000558072 TNP2Q05952 138 aa8.11□□□□□ -1.11
TPM1-209ENST00000558072 C2orf82Q6UX34 121 aa8.11□□□□□ -1.11
TPM1-209ENST00000558072 UNQ6190/PRO20217Q6UXQ8 127 aa8.11□□□□□ -1.11
TPM1-209ENST00000558072 KRTAP3-3Q9BYR6 98 aa8.11□□□□□ -1.11
TPM1-209ENST00000558072 KRTAP3-2Q9BYR7 98 aa8.11□□□□□ -1.11
TPM1-209ENST00000558072 DNAH17Q9UFH2 4485 aa8.11□□□□□ -1.11
TPM1-209ENST00000558072 TLX1NBP0CAT3 122 aa8.1□□□□□ -1.11
TPM1-209ENST00000558072 LINC00158P58513 81 aa8.1□□□□□ -1.11
TPM1-209ENST00000558072 Q6ZRU5 148 aa8.1□□□□□ -1.11
TPM1-209ENST00000558072 LOC107984640A0A0U1RRK4 108 aa8.09□□□□□ -1.11
TPM1-209ENST00000558072 NDUFC2-KCTD14E9PQ53 114 aa8.09□□□□□ -1.11
TPM1-209ENST00000558072 IFITM1P13164 125 aa8.09□□□□□ -1.11
TPM1-209ENST00000558072 SRSF9Q13242 221 aaKnown RBP eCLIP8.09□□□□□ -1.11
TPM1-209ENST00000558072 TAL2Q16559 108 aa8.09□□□□□ -1.11
TPM1-209ENST00000558072 C9orf163Q8N9P6 203 aa8.09□□□□□ -1.11
TPM1-209ENST00000558072 LINC00526Q96FQ7 95 aa8.09□□□□□ -1.11
TPM1-209ENST00000558072 PPDPFQ9H3Y8 114 aa8.09□□□□□ -1.11
TPM1-209ENST00000558072 SPANXB1Q9NS25 103 aaPredicted RBP8.09□□□□□ -1.11
TPM1-209ENST00000558072 LINC00474Q9P2X8 69 aa8.09□□□□□ -1.11
TPM1-209ENST00000558072 C6orf48Q9UBA6 75 aa8.09□□□□□ -1.11
TPM1-209ENST00000558072 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.08□□□□□ -1.12
TPM1-209ENST00000558072 HNRNPA3P51991 378 aaKnown RBP8.08□□□□□ -1.12
TPM1-209ENST00000558072 IGLV5-52A0A0A0MRZ9 124 aa8.07□□□□□ -1.12
TPM1-209ENST00000558072 PFN2P35080 140 aa8.07□□□□□ -1.12
TPM1-209ENST00000558072 C10orf25Q5T742 122 aa8.07□□□□□ -1.12
TPM1-209ENST00000558072 SPANXDQ9BXN6 97 aa8.07□□□□□ -1.12
TPM1-209ENST00000558072 TTTY13Q9BZ97 58 aa8.07□□□□□ -1.12
TPM1-209ENST00000558072 SPANXCQ9NY87 97 aa8.07□□□□□ -1.12
TPM1-209ENST00000558072 SMIM13P0DJ93 91 aa8.06□□□□□ -1.12
TPM1-209ENST00000558072 PTTG1IPP53801 180 aa8.06□□□□□ -1.12
TPM1-209ENST00000558072 HIST1H4GQ99525 98 aa8.06□□□□□ -1.12
TPM1-209ENST00000558072 PRO1933Q9H354 126 aa8.06□□□□□ -1.12
TPM1-209ENST00000558072 FAT2Q9NYQ8 4349 aa8.05□□□□□ -1.12
TPM1-209ENST00000558072 SLPIP03973 132 aa8.05□□□□□ -1.12
TPM1-209ENST00000558072 DNAH11Q96DT5 4516 aa8.04□□□□□ -1.12
TPM1-209ENST00000558072 TMEM238LA0A1B0GVL6 79 aa8.04□□□□□ -1.12
TPM1-209ENST00000558072 A6NJY4 79 aa8.04□□□□□ -1.12
TPM1-209ENST00000558072 RPL24P83731 157 aaKnown RBP8.04□□□□□ -1.12
TPM1-209ENST00000558072 HSD52Q0P140 79 aa8.04□□□□□ -1.12
TPM1-209ENST00000558072 MIR7-3HGQ8N6C7 128 aa8.04□□□□□ -1.12
TPM1-209ENST00000558072 TP73-AS1Q9UF72 201 aa8.04□□□□□ -1.12
TPM1-209ENST00000558072 LOC107984156A0A0G2JMH3 177 aa8.03□□□□□ -1.12
TPM1-209ENST00000558072 C16orf90A8MZG2 172 aa8.03□□□□□ -1.12
TPM1-209ENST00000558072 RPL18AQ02543 176 aaKnown RBP8.03□□□□□ -1.12
TPM1-209ENST00000558072 ARL17AQ8IVW1 177 aa8.03□□□□□ -1.12
TPM1-209ENST00000558072 M0R143 59 aa8.02□□□□□ -1.13
TPM1-209ENST00000558072 DDTP30046 118 aa8.02□□□□□ -1.13
TPM1-209ENST00000558072 C9orf116Q5BN46 136 aaPredicted RBP8.02□□□□□ -1.13
TPM1-209ENST00000558072 LITAFQ99732 161 aa8.02□□□□□ -1.13
TPM1-209ENST00000558072 A0A0U1RRA0 63 aa8.01□□□□□ -1.13
TPM1-209ENST00000558072 KRTAP10-2P60368 255 aa8.01□□□□□ -1.13
TPM1-209ENST00000558072 C2orf91Q6ZV80 131 aa8.01□□□□□ -1.13
TPM1-209ENST00000558072 LINC00308Q8TCZ7 52 aa8.01□□□□□ -1.13
TPM1-209ENST00000558072 SND1-IT1Q9HBX3 110 aa8.01□□□□□ -1.13
TPM1-209ENST00000558072 NDUFC2O95298 119 aa8□□□□□ -1.13
TPM1-209ENST00000558072 GAGE2BQ13066 116 aa8□□□□□ -1.13
TPM1-209ENST00000558072 GAGE2EQ4V326 116 aa8□□□□□ -1.13
TPM1-209ENST00000558072 ADAMTSL4-AS1Q5T5F5 129 aa8□□□□□ -1.13
TPM1-209ENST00000558072 SDIM1Q6ZPB5 146 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms